RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 KCND1Q9NSA2 647 aa13.21□□□□□ -0.29
FIRRE-201ENST00000427391 A0A0U1RQJ8 604 aa13.21□□□□□ -0.3
FIRRE-201ENST00000427391 TBX2Q13207 712 aaPredicted RBP13.21□□□□□ -0.3
FIRRE-201ENST00000427391 KARSQ15046 597 aaKnown RBP13.21□□□□□ -0.3
FIRRE-201ENST00000427391 KANK3Q6NY19 840 aa13.21□□□□□ -0.3
FIRRE-201ENST00000427391 ELOA2Q8IYF1 753 aaPredicted RBP13.21□□□□□ -0.3
FIRRE-201ENST00000427391 ATRIPQ8WXE1 791 aa13.21□□□□□ -0.3
FIRRE-201ENST00000427391 FERMT2Q96AC1 680 aa13.21□□□□□ -0.3
FIRRE-201ENST00000427391 CTNND2Q9UQB3 1225 aa13.21□□□□□ -0.3
FIRRE-201ENST00000427391 SYNRGQ9UMZ2 1314 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 PPP1R3GB7ZBB8 358 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 TSPY3P0CV98 308 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 TSPY8P0CW00 308 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 SPECC1LQ69YQ0 1117 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 PRR5LQ6MZQ0 368 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 TRIM65Q6PJ69 517 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 APTXQ7Z2E3 356 aaKnown RBP13.2□□□□□ -0.3
FIRRE-201ENST00000427391 HEATR3Q7Z4Q2 680 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 MAD2L2Q9UI95 211 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 PDS5AQ29RF7 1337 aaKnown RBP13.2□□□□□ -0.3
FIRRE-201ENST00000427391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.2□□□□□ -0.3
FIRRE-201ENST00000427391 NRDCO43847 1150 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 UFL1O94874 794 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 E2F4Q16254 413 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 ERCC6LQ2NKX8 1250 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 WWC2Q6AWC2 1192 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 BLIDQ8IZY5 108 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 BAG1Q99933 345 aaPredicted RBP13.2□□□□□ -0.3
FIRRE-201ENST00000427391 TMEM60Q9H2L4 133 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 DLEC1Q9Y238 1755 aa13.2□□□□□ -0.3
FIRRE-201ENST00000427391 CCT6AP40227 531 aaKnown RBP13.19□□□□□ -0.3
FIRRE-201ENST00000427391 INF2Q27J81 1249 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 SPTY2D1Q68D10 685 aaPredicted RBP13.19□□□□□ -0.3
FIRRE-201ENST00000427391 TRIML1Q8N9V2 468 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 DACH1Q9UI36 760 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 PPP2R2CQ9Y2T4 447 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 CCDC88AQ3V6T2 1871 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 LAMB1P07942 1786 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 SLU7O95391 586 aaKnown RBP13.19□□□□□ -0.3
FIRRE-201ENST00000427391 ETF1P62495 437 aaKnown RBP13.19□□□□□ -0.3
FIRRE-201ENST00000427391 NR1I3Q14994 352 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 KMT5BQ4FZB7 885 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 WDR66Q8TBY9 1149 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 TMEM47Q9BQJ4 181 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 RASA1P20936 1047 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 KIF5BP33176 963 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 BTDP43251 543 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 PDXDC2PQ6P474 469 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 SEPT12Q8IYM1 358 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 C4orf32Q8N8J7 132 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 IRX2Q9BZI1 471 aaPredicted RBP13.19□□□□□ -0.3
FIRRE-201ENST00000427391 VAT1LQ9HCJ6 419 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 GDAQ9Y2T3 454 aa13.19□□□□□ -0.3
FIRRE-201ENST00000427391 SOWAHDA6NJG2 315 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 SPATA1Q5VX52 437 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 RRAGBQ5VZM2 374 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 FBXO38Q6PIJ6 1188 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 ZNF444Q8N0Y2 327 aaPredicted RBP13.18□□□□□ -0.3
FIRRE-201ENST00000427391 EEF2KMTQ96G04 330 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 WDR24Q96S15 920 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 RTFDC1Q9BY42 306 aaPredicted RBP13.18□□□□□ -0.3
FIRRE-201ENST00000427391 SBF2Q86WG5 1849 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 A0A1B0GTH6 734 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 IGSF3O75054 1194 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 ERCC5P28715 1186 aaPredicted RBP13.18□□□□□ -0.3
FIRRE-201ENST00000427391 RBL2Q08999 1139 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 USP17L2Q6R6M4 530 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 ZNF804AQ7Z570 1209 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 CLEC10AQ8IUN9 316 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 RPGRQ92834 1020 aaKnown RBP13.18□□□□□ -0.3
FIRRE-201ENST00000427391 CD209Q9NNX6 404 aa13.18□□□□□ -0.3
FIRRE-201ENST00000427391 URI1O94763 535 aaPredicted RBP13.17□□□□□ -0.3
FIRRE-201ENST00000427391 GRM4Q14833 912 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 DGKHQ86XP1 1220 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 IQUBQ8NA54 791 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 LRRC15Q8TF66 581 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 PCDHA4Q9UN74 947 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 ARHGAP6O43182 974 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 BMP15O95972 392 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 SLURP2P0DP57 97 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 KCNJ6P48051 423 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 ERO1AQ96HE7 468 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 GSDMAQ96QA5 445 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 EPC1Q9H2F5 836 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 L2HGDHQ9H9P8 463 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 BCCIPQ9P287 314 aaKnown RBP eCLIP13.17□□□□□ -0.3
FIRRE-201ENST00000427391 PCDHA6Q9UN73 950 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 LEMD3Q9Y2U8 911 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 PCDHA8Q9Y5H6 950 aa13.17□□□□□ -0.3
FIRRE-201ENST00000427391 CCDC194A0A1B0GVG4 234 aa13.16□□□□□ -0.3
FIRRE-201ENST00000427391 F8W031 263 aaPredicted RBP13.16□□□□□ -0.3
FIRRE-201ENST00000427391 CDK8P49336 464 aa13.16□□□□□ -0.3
FIRRE-201ENST00000427391 CCDC93Q567U6 631 aa13.16□□□□□ -0.3
FIRRE-201ENST00000427391 TEX11Q8IYF3 940 aa13.16□□□□□ -0.3
FIRRE-201ENST00000427391 IGSF22Q8N9C0 903 aa13.16□□□□□ -0.3
FIRRE-201ENST00000427391 RASSF8Q8NHQ8 419 aa13.16□□□□□ -0.3
FIRRE-201ENST00000427391 VPS16Q9H269 839 aa13.16□□□□□ -0.3
FIRRE-201ENST00000427391 MRPL44Q9H9J2 332 aaKnown RBP13.16□□□□□ -0.3
FIRRE-201ENST00000427391 ADD3Q9UEY8 706 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms