RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 HEATR6Q6AI08 1181 aaKnown RBP8.53□□□□□ -1.04
SSBP3-207ENST00000426150 PPP1R13LQ8WUF5 828 aa8.53□□□□□ -1.04
SSBP3-207ENST00000426150 APBA2Q99767 749 aa8.53□□□□□ -1.04
SSBP3-207ENST00000426150 KLHL25Q9H0H3 589 aa8.53□□□□□ -1.04
SSBP3-207ENST00000426150 PCOLCE2Q9UKZ9 415 aa8.53□□□□□ -1.04
SSBP3-207ENST00000426150 MKL2Q9ULH7 1088 aa8.53□□□□□ -1.04
SSBP3-207ENST00000426150 UACAQ9BZF9 1416 aa8.53□□□□□ -1.04
SSBP3-207ENST00000426150 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-207ENST00000426150 ARHGEF15O94989 841 aa8.52□□□□□ -1.05
SSBP3-207ENST00000426150 PREPP48147 710 aa8.52□□□□□ -1.05
SSBP3-207ENST00000426150 PRRT3Q5FWE3 981 aa8.52□□□□□ -1.05
SSBP3-207ENST00000426150 FOXB2Q5VYV0 432 aa8.52□□□□□ -1.05
SSBP3-207ENST00000426150 DCAF15Q66K64 600 aa8.52□□□□□ -1.05
SSBP3-207ENST00000426150 SHISA2Q6UWI4 295 aa8.52□□□□□ -1.05
SSBP3-207ENST00000426150 CCDC144CPQ8IYA2 1237 aa8.52□□□□□ -1.05
SSBP3-207ENST00000426150 MFSD2AQ8NA29 543 aa8.52□□□□□ -1.05
SSBP3-207ENST00000426150 ZNF512BQ96KM6 892 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-207ENST00000426150 ARHGEF4Q9NR80 690 aa8.52□□□□□ -1.05
SSBP3-207ENST00000426150 PLAAQ9Y263 795 aa8.52□□□□□ -1.05
SSBP3-207ENST00000426150 CD109Q6YHK3 1445 aa8.52□□□□□ -1.05
SSBP3-207ENST00000426150 BIVM-ERCC5R4GMW8 1640 aa8.51□□□□□ -1.05
SSBP3-207ENST00000426150 DNAJB8Q8NHS0 232 aa8.51□□□□□ -1.05
SSBP3-207ENST00000426150 ACSS3Q9H6R3 686 aa8.51□□□□□ -1.05
SSBP3-207ENST00000426150 APEX2Q9UBZ4 518 aa8.51□□□□□ -1.05
SSBP3-207ENST00000426150 CCDC163A0A0D9SF12 145 aa8.5□□□□□ -1.05
SSBP3-207ENST00000426150 WIPF1O43516 503 aa8.5□□□□□ -1.05
SSBP3-207ENST00000426150 ALX3O95076 343 aa8.5□□□□□ -1.05
SSBP3-207ENST00000426150 RAB6AP20340 208 aa8.5□□□□□ -1.05
SSBP3-207ENST00000426150 GRIK4Q16099 956 aa8.5□□□□□ -1.05
SSBP3-207ENST00000426150 C21orf62-AS1Q17RA5 79 aa8.5□□□□□ -1.05
SSBP3-207ENST00000426150 NBPF12Q5TAG4 269 aaPredicted RBP8.5□□□□□ -1.05
SSBP3-207ENST00000426150 ZNF513Q8N8E2 541 aaPredicted RBP8.5□□□□□ -1.05
SSBP3-207ENST00000426150 EXOC2Q96KP1 924 aa8.5□□□□□ -1.05
SSBP3-207ENST00000426150 FGD4Q96M96 766 aa8.5□□□□□ -1.05
SSBP3-207ENST00000426150 MKRN2Q9H000 416 aaKnown RBP8.5□□□□□ -1.05
SSBP3-207ENST00000426150 AKTIPQ9H8T0 292 aa8.5□□□□□ -1.05
SSBP3-207ENST00000426150 LRP2BPQ9P2M1 347 aa8.5□□□□□ -1.05
SSBP3-207ENST00000426150 CEP131Q9UPN4 1083 aa8.5□□□□□ -1.05
SSBP3-207ENST00000426150 UHRF1BP1LA0JNW5 1464 aa8.5□□□□□ -1.05
SSBP3-207ENST00000426150 TRAV20A0A0B4J274 112 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 KRBA1A5PL33 1030 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 RAB11FIP3O75154 756 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 ITGAVP06756 1048 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 VIL1P09327 827 aaKnown RBP8.49□□□□□ -1.05
SSBP3-207ENST00000426150 L1CAMP32004 1257 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 AMPD3Q01432 767 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 HSP90AA2PQ14568 343 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-207ENST00000426150 ANKRD39Q53RE8 183 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 FAM209AQ5JX71 171 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 Q6ZS46 218 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 ZNF227Q86WZ6 799 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 LRRN4CLQ8ND94 238 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 KISS1RQ969F8 398 aaPredicted RBP8.49□□□□□ -1.05
SSBP3-207ENST00000426150 PPP1R14AQ96A00 147 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 KREMEN1Q96MU8 473 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 CDC6Q99741 560 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 AARSD1Q9BTE6 412 aaKnown RBP8.49□□□□□ -1.05
SSBP3-207ENST00000426150 CEP41Q9BYV8 373 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 GBP3Q9H0R5 595 aa8.49□□□□□ -1.05
SSBP3-207ENST00000426150 NOP53Q9NZM5 478 aaKnown RBP8.49□□□□□ -1.05
SSBP3-207ENST00000426150 ZCCHC11Q5TAX3 1644 aaKnown RBP8.48□□□□□ -1.05
SSBP3-207ENST00000426150 SART1O43290 800 aaKnown RBP8.48□□□□□ -1.05
SSBP3-207ENST00000426150 USP11P51784 963 aa8.48□□□□□ -1.05
SSBP3-207ENST00000426150 PPP2R2AP63151 447 aa8.48□□□□□ -1.05
SSBP3-207ENST00000426150 RNF4P78317 190 aa8.48□□□□□ -1.05
SSBP3-207ENST00000426150 CBX2Q14781 532 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-207ENST00000426150 YOD1Q5VVQ6 348 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-207ENST00000426150 LETMD1Q6P1Q0 360 aa8.48□□□□□ -1.05
SSBP3-207ENST00000426150 ADAT2Q7Z6V5 191 aaKnown RBP8.48□□□□□ -1.05
SSBP3-207ENST00000426150 LENG1Q96BZ8 264 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-207ENST00000426150 VWCEQ96DN2 955 aa8.48□□□□□ -1.05
SSBP3-207ENST00000426150 MIPEPQ99797 713 aa8.48□□□□□ -1.05
SSBP3-207ENST00000426150 DHRS4Q9BTZ2 278 aa8.48□□□□□ -1.05
SSBP3-207ENST00000426150 LGR4Q9BXB1 951 aa8.48□□□□□ -1.05
SSBP3-207ENST00000426150 MRPS23Q9Y3D9 190 aaKnown RBP8.48□□□□□ -1.05
SSBP3-207ENST00000426150 DAGLAQ9Y4D2 1042 aa8.48□□□□□ -1.05
SSBP3-207ENST00000426150 ZNF451Q9Y4E5 1061 aa8.48□□□□□ -1.05
SSBP3-207ENST00000426150 ADAMTSL3P82987 1691 aa8.48□□□□□ -1.05
SSBP3-207ENST00000426150 KDM5BQ9UGL1 1544 aa8.48□□□□□ -1.05
SSBP3-207ENST00000426150 WDR7Q9Y4E6 1490 aa8.47□□□□□ -1.05
SSBP3-207ENST00000426150 SHOXO15266 292 aa8.47□□□□□ -1.05
SSBP3-207ENST00000426150 GAS2O43903 313 aaKnown RBP8.47□□□□□ -1.05
SSBP3-207ENST00000426150 GLB1P16278 677 aa8.47□□□□□ -1.05
SSBP3-207ENST00000426150 CD247P20963 164 aa8.47□□□□□ -1.05
SSBP3-207ENST00000426150 AUHQ13825 339 aaKnown RBP8.47□□□□□ -1.05
SSBP3-207ENST00000426150 CDPF1Q6NVV7 123 aa8.47□□□□□ -1.05
SSBP3-207ENST00000426150 C7orf61Q8IZ16 206 aa8.47□□□□□ -1.05
SSBP3-207ENST00000426150 RPUSD2Q8IZ73 545 aaKnown RBP8.47□□□□□ -1.05
SSBP3-207ENST00000426150 NINJ1Q92982 152 aa8.47□□□□□ -1.05
SSBP3-207ENST00000426150 MFSD3Q96ES6 412 aa8.47□□□□□ -1.05
SSBP3-207ENST00000426150 SEMA6CQ9H3T2 930 aa8.47□□□□□ -1.05
SSBP3-207ENST00000426150 NCOA5Q9HCD5 579 aaKnown RBP8.47□□□□□ -1.05
SSBP3-207ENST00000426150 WHRNQ9P202 907 aa8.47□□□□□ -1.05
SSBP3-207ENST00000426150 USP21Q9UK80 565 aa8.47□□□□□ -1.05
SSBP3-207ENST00000426150 TRBV23-1A0A0A0MS06 115 aa8.46□□□□□ -1.06
SSBP3-207ENST00000426150 RFPL3O75679 317 aa8.46□□□□□ -1.06
SSBP3-207ENST00000426150 PPM1BO75688 479 aa8.46□□□□□ -1.06
SSBP3-207ENST00000426150 SLITRK5O94991 958 aa8.46□□□□□ -1.06
SSBP3-207ENST00000426150 CAPNS1P04632 268 aa8.46□□□□□ -1.06
SSBP3-207ENST00000426150 NFICP08651 508 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms