RNA–Protein interactions for RNA: ENST00000425992.2

VDAC1-204, Transcript of voltage dependent anion channel 1, humanhuman

TSL 3

Gene VDAC1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-204ENST00000425992 TFAP4Q01664 338 aa28.22■■■□□ 2.11
VDAC1-204ENST00000425992 MB21D1Q8N884 522 aa28.22■■■□□ 2.11
VDAC1-204ENST00000425992 NUP88Q99567 741 aaPredicted RBP28.22■■■□□ 2.11
VDAC1-204ENST00000425992 ZNFX1Q9P2E3 1918 aaKnown RBP28.22■■■□□ 2.11
VDAC1-204ENST00000425992 F5H6K3 240 aa28.21■■■□□ 2.11
VDAC1-204ENST00000425992 FGAP02671 866 aa28.21■■■□□ 2.11
VDAC1-204ENST00000425992 PTPREP23469 700 aa28.21■■■□□ 2.11
VDAC1-204ENST00000425992 KLRC3Q07444 240 aa28.21■■■□□ 2.11
VDAC1-204ENST00000425992 U2AF1L4Q8WU68 220 aaKnown RBP28.21■■■□□ 2.11
VDAC1-204ENST00000425992 PAK6Q9NQU5 681 aaPredicted RBP28.21■■■□□ 2.11
VDAC1-204ENST00000425992 LAMA4Q16363 1823 aa28.2■■■□□ 2.11
VDAC1-204ENST00000425992 SLC15A5A6NIM6 579 aa28.2■■■□□ 2.1
VDAC1-204ENST00000425992 NDUFB10O96000 172 aa28.2■■■□□ 2.1
VDAC1-204ENST00000425992 MAP2K5Q13163 448 aa28.2■■■□□ 2.1
VDAC1-204ENST00000425992 CCL14Q16627 93 aa28.2■■■□□ 2.1
VDAC1-204ENST00000425992 MKL1Q969V6 931 aa28.2■■■□□ 2.1
VDAC1-204ENST00000425992 APBA2Q99767 749 aa28.2■■■□□ 2.1
VDAC1-204ENST00000425992 ADAMTS5Q9UNA0 930 aa28.2■■■□□ 2.1
VDAC1-204ENST00000425992 SGPL1O95470 568 aa28.19■■■□□ 2.1
VDAC1-204ENST00000425992 TTLL1O95922 423 aa28.19■■■□□ 2.1
VDAC1-204ENST00000425992 PLS1Q14651 629 aa28.19■■■□□ 2.1
VDAC1-204ENST00000425992 DEFB118Q96PH6 123 aa28.19■■■□□ 2.1
VDAC1-204ENST00000425992 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.19■■■□□ 2.19e-9■■■■■ 29.1
VDAC1-204ENST00000425992 PPP1R9AQ9ULJ8 1098 aa28.19■■■□□ 2.1
VDAC1-204ENST00000425992 IVNS1ABPQ9Y6Y0 642 aa28.19■■■□□ 2.1
VDAC1-204ENST00000425992 ZMYM6O95789 1325 aa28.18■■■□□ 2.1
VDAC1-204ENST00000425992 ZKSCAN1P17029 563 aaPredicted RBP28.18■■■□□ 2.1
VDAC1-204ENST00000425992 GRB14Q14449 540 aa28.18■■■□□ 2.1
VDAC1-204ENST00000425992 TMEM132BQ14DG7 1078 aa28.18■■■□□ 2.1
VDAC1-204ENST00000425992 TRMT44Q8IYL2 757 aaKnown RBP28.18■■■□□ 2.1
VDAC1-204ENST00000425992 LRRC47Q8N1G4 583 aaKnown RBP28.18■■■□□ 2.1
VDAC1-204ENST00000425992 SHCBP1Q8NEM2 672 aa28.18■■■□□ 2.1
VDAC1-204ENST00000425992 ERCC3P19447 782 aa28.17■■■□□ 2.1
VDAC1-204ENST00000425992 CWC27Q6UX04 472 aaKnown RBP28.17■■■□□ 2.1
VDAC1-204ENST00000425992 DIAPH3Q9NSV4 1193 aa28.17■■■□□ 2.1
VDAC1-204ENST00000425992 RPTORQ8N122 1335 aa28.17■■■□□ 2.1
VDAC1-204ENST00000425992 TSPY2A6NKD2 308 aa28.16■■■□□ 2.1
VDAC1-204ENST00000425992 VWA5AO00534 786 aa28.16■■■□□ 2.1
VDAC1-204ENST00000425992 ORC4O43929 436 aa28.16■■■□□ 2.1
VDAC1-204ENST00000425992 PRKAR2AP13861 404 aaKnown RBP28.16■■■□□ 2.1
VDAC1-204ENST00000425992 MFAP1P55081 439 aaKnown RBP28.16■■■□□ 2.1
VDAC1-204ENST00000425992 MAP3K21Q5TCX8 1036 aa28.16■■■□□ 2.1
VDAC1-204ENST00000425992 HMX1Q9NP08 348 aaPredicted RBP28.16■■■□□ 2.1
VDAC1-204ENST00000425992 SYNPO2Q9UMS6 1093 aa28.16■■■□□ 2.1
VDAC1-204ENST00000425992 RANBP6O60518 1105 aaKnown RBP28.15■■■□□ 2.1
VDAC1-204ENST00000425992 FGRP09769 529 aa28.15■■■□□ 2.1
VDAC1-204ENST00000425992 GSPT1P15170 499 aaKnown RBP28.15■■■□□ 2.1
VDAC1-204ENST00000425992 HAND2P61296 217 aa28.15■■■□□ 2.1
VDAC1-204ENST00000425992 TTC22Q5TAA0 569 aa28.15■■■□□ 2.1
VDAC1-204ENST00000425992 UBE2Q1Q7Z7E8 422 aa28.15■■■□□ 2.1
VDAC1-204ENST00000425992 NCAPG2Q86XI2 1143 aa28.15■■■□□ 2.1
VDAC1-204ENST00000425992 GMCL1P1Q8NEA9 526 aa28.15■■■□□ 2.1
VDAC1-204ENST00000425992 SLF1Q9BQI6 1058 aa28.15■■■□□ 2.1
VDAC1-204ENST00000425992 IL17RBQ9NRM6 502 aa28.15■■■□□ 2.1
VDAC1-204ENST00000425992 FLRT1Q9NZU1 646 aa28.15■■■□□ 2.1
VDAC1-204ENST00000425992 FRMPD3Q5JV73 1810 aa28.14■■■□□ 2.1
VDAC1-204ENST00000425992 HIP1O00291 1037 aa28.14■■■□□ 2.1
VDAC1-204ENST00000425992 NMT2O60551 498 aa28.14■■■□□ 2.1
VDAC1-204ENST00000425992 TFRCP02786 760 aaKnown RBP28.14■■■□□ 2.1
VDAC1-204ENST00000425992 CACNB2Q08289 660 aaPredicted RBP28.14■■■□□ 2.1
VDAC1-204ENST00000425992 PRPF38BQ5VTL8 546 aaKnown RBP28.14■■■□□ 2.1
VDAC1-204ENST00000425992 REPS2Q8NFH8 660 aa28.14■■■□□ 2.1
VDAC1-204ENST00000425992 NPLOC4Q8TAT6 608 aa28.14■■■□□ 2.1
VDAC1-204ENST00000425992 NBPF3Q9H094 633 aa28.14■■■□□ 2.1
VDAC1-204ENST00000425992 CRISPLD2Q9H0B8 497 aa28.14■■■□□ 2.1
VDAC1-204ENST00000425992 MROH8Q9H579 483 aa28.14■■■□□ 2.1
VDAC1-204ENST00000425992 PLXNA1Q9UIW2 1896 aa28.14■■■□□ 2.1
VDAC1-204ENST00000425992 STRNO43815 780 aa28.13■■■□□ 2.09
VDAC1-204ENST00000425992 HOXC6P09630 235 aa28.13■■■□□ 2.09
VDAC1-204ENST00000425992 ADORA2AP29274 412 aa28.13■■■□□ 2.09
VDAC1-204ENST00000425992 ZNF214Q9UL59 606 aaPredicted RBP28.13■■■□□ 2.09
VDAC1-204ENST00000425992 RRP12Q5JTH9 1297 aaKnown RBP28.12■■■□□ 2.09
VDAC1-204ENST00000425992 SLFN13Q68D06 897 aa28.12■■■□□ 2.09
VDAC1-204ENST00000425992 TOMM22Q9NS69 142 aa28.12■■■□□ 2.09
VDAC1-204ENST00000425992 FARP2O94887 1054 aaPredicted RBP28.11■■■□□ 2.09
VDAC1-204ENST00000425992 SLC25A27O95847 323 aa28.11■■■□□ 2.09
VDAC1-204ENST00000425992 RIOX2Q8IUF8 465 aa28.11■■■□□ 2.09
VDAC1-204ENST00000425992 PRPF38AQ8NAV1 312 aaKnown RBP28.11■■■□□ 2.09
VDAC1-204ENST00000425992 STX8Q9UNK0 236 aa28.11■■■□□ 2.09
VDAC1-204ENST00000425992 STAT3P40763 770 aa28.1■■■□□ 2.09
VDAC1-204ENST00000425992 PPP4R3BQ5MIZ7 849 aa28.1■■■□□ 2.09
VDAC1-204ENST00000425992 DPP9Q86TI2 863 aa28.1■■■□□ 2.09
VDAC1-204ENST00000425992 TBC1D10CQ8IV04 446 aa28.1■■■□□ 2.09
VDAC1-204ENST00000425992 CHMP4CQ96CF2 233 aa28.1■■■□□ 2.09
VDAC1-204ENST00000425992 FEM1BQ9UK73 627 aa28.1■■■□□ 2.09
VDAC1-204ENST00000425992 COBLO75128 1261 aa28.09■■■□□ 2.09
VDAC1-204ENST00000425992 BMP3P12645 472 aa28.09■■■□□ 2.09
VDAC1-204ENST00000425992 CCND3P30281 292 aaPredicted RBP28.09■■■□□ 2.09
VDAC1-204ENST00000425992 ABRAQ8N0Z2 381 aa28.09■■■□□ 2.09
VDAC1-204ENST00000425992 KIFC2Q96AC6 838 aa28.09■■■□□ 2.09
VDAC1-204ENST00000425992 IL25Q9H293 177 aa28.09■■■□□ 2.09
VDAC1-204ENST00000425992 CAPN2P17655 700 aa28.08■■■□□ 2.09
VDAC1-204ENST00000425992 NOVP48745 357 aa28.08■■■□□ 2.09
VDAC1-204ENST00000425992 AKNAD1Q5T1N1 836 aa28.08■■■□□ 2.09
VDAC1-204ENST00000425992 MFSD14CQ5VZR4 134 aa28.08■■■□□ 2.09
VDAC1-204ENST00000425992 STAG1Q8WVM7 1258 aa28.08■■■□□ 2.09
VDAC1-204ENST00000425992 IGHA2P01877 340 aa28.07■■■□□ 2.08
VDAC1-204ENST00000425992 FCER1AP12319 257 aa28.07■■■□□ 2.08
VDAC1-204ENST00000425992 GMCL1Q96IK5 515 aa28.07■■■□□ 2.08
VDAC1-204ENST00000425992 ALPK3Q96L96 1907 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms