RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 ATAD5Q96QE3 1844 aa18.31■□□□□ 0.52
SCRN1-205ENST00000425819 AKAP17AQ02040 695 aaKnown RBP18.31■□□□□ 0.52
SCRN1-205ENST00000425819 SLC35G1Q2M3R5 365 aa18.31■□□□□ 0.52
SCRN1-205ENST00000425819 KIAA1755Q5JYT7 1200 aa18.31■□□□□ 0.52
SCRN1-205ENST00000425819 FOXD4L5Q5VV16 416 aaPredicted RBP18.31■□□□□ 0.52
SCRN1-205ENST00000425819 FOXD4L4Q8WXT5 416 aaPredicted RBP18.31■□□□□ 0.52
SCRN1-205ENST00000425819 AIFM3Q96NN9 605 aa18.31■□□□□ 0.52
SCRN1-205ENST00000425819 NUP88Q99567 741 aaPredicted RBP18.31■□□□□ 0.52
SCRN1-205ENST00000425819 LZTS2Q9BRK4 669 aa18.31■□□□□ 0.52
SCRN1-205ENST00000425819 UBA5Q9GZZ9 404 aa18.31■□□□□ 0.52
SCRN1-205ENST00000425819 CSADQ9Y600 493 aa18.31■□□□□ 0.52
SCRN1-205ENST00000425819 SNCAIPQ9Y6H5 919 aa18.31■□□□□ 0.52
SCRN1-205ENST00000425819 ZHX2Q9Y6X8 837 aa18.31■□□□□ 0.52
SCRN1-205ENST00000425819 V9GY48 417 aaPredicted RBP18.31■□□□□ 0.52
SCRN1-205ENST00000425819 STX6O43752 255 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 PDCP20941 246 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 NUCB2P80303 420 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 DOCK1Q14185 1865 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 TTBK2Q6IQ55 1244 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 ARMC9Q7Z3E5 817 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 GMCL1Q96IK5 515 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 ALG1Q9BT22 464 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 RNF26Q9BY78 433 aaPredicted RBP18.3■□□□□ 0.52
SCRN1-205ENST00000425819 VCPKMTQ9H867 229 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 AS3MTQ9HBK9 375 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 GPBP1L1Q9HC44 474 aaPredicted RBP18.3■□□□□ 0.52
SCRN1-205ENST00000425819 VPS37CA5D8V6 355 aaPredicted RBP18.3■□□□□ 0.52
SCRN1-205ENST00000425819 PRPF3O43395 683 aaKnown RBP18.3■□□□□ 0.52
SCRN1-205ENST00000425819 CYTH3O43739 400 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 SPP2Q13103 211 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 GPATCH4Q5T3I0 446 aaKnown RBP18.3■□□□□ 0.52
SCRN1-205ENST00000425819 CHADLQ6NUI6 762 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 WDR18Q9BV38 432 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 ZDHHC9Q9Y397 364 aa18.3■□□□□ 0.52
SCRN1-205ENST00000425819 DEXIO95424 95 aa18.29■□□□□ 0.52
SCRN1-205ENST00000425819 BMP3P12645 472 aa18.29■□□□□ 0.52
SCRN1-205ENST00000425819 SLC16A2P36021 539 aa18.29■□□□□ 0.52
SCRN1-205ENST00000425819 MTMR2Q13614 643 aa18.29■□□□□ 0.52
SCRN1-205ENST00000425819 MAP3K11Q16584 847 aa18.29■□□□□ 0.52
SCRN1-205ENST00000425819 ANKRD13AQ8IZ07 590 aa18.29■□□□□ 0.52
SCRN1-205ENST00000425819 ZNF280CQ8ND82 737 aa18.29■□□□□ 0.52
SCRN1-205ENST00000425819 CLMNQ96JQ2 1002 aa18.29■□□□□ 0.52
SCRN1-205ENST00000425819 KIAA1683Q9H0B3 1180 aa18.29■□□□□ 0.52
SCRN1-205ENST00000425819 ELP3Q9H9T3 547 aa18.29■□□□□ 0.52
SCRN1-205ENST00000425819 VAT1LQ9HCJ6 419 aa18.29■□□□□ 0.52
SCRN1-205ENST00000425819 TRIM75PA6NK02 468 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 USP17L10C9JJH3 530 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 H3BQV1 296 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 BRD1O95696 1058 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 GUCY1B3Q02153 619 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 DGKZQ13574 1117 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 FAM83BQ5T0W9 1011 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 IFFO2Q5TF58 517 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 OTUD7BQ6GQQ9 843 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 WASF1Q92558 559 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 C8orf76Q96K31 380 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 SPZ1Q9BXG8 430 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 GJB4Q9NTQ9 266 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 MTMR6Q9Y217 621 aa18.28■□□□□ 0.52
SCRN1-205ENST00000425819 PKN1Q16512 942 aa18.27■□□□□ 0.52
SCRN1-205ENST00000425819 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
SCRN1-205ENST00000425819 WDR33Q9C0J8 1336 aaKnown RBP18.27■□□□□ 0.51
SCRN1-205ENST00000425819 TMEM232C9JQI7 657 aa18.26■□□□□ 0.51
SCRN1-205ENST00000425819 CELF2O95319 508 aaKnown RBP18.26■□□□□ 0.51
SCRN1-205ENST00000425819 SMARCA1P28370 1054 aa18.26■□□□□ 0.51
SCRN1-205ENST00000425819 BACE1P56817 501 aa18.26■□□□□ 0.51
SCRN1-205ENST00000425819 IKQ13123 557 aaPredicted RBP18.26■□□□□ 0.51
SCRN1-205ENST00000425819 HOMER1Q86YM7 354 aa18.26■□□□□ 0.51
SCRN1-205ENST00000425819 RIOX1Q9H6W3 641 aa18.26■□□□□ 0.51
SCRN1-205ENST00000425819 PAPPA2Q9BXP8 1791 aa18.26■□□□□ 0.51
SCRN1-205ENST00000425819 ITGBL1O95965 494 aaPredicted RBP18.25■□□□□ 0.51
SCRN1-205ENST00000425819 ZSCAN22P10073 491 aaPredicted RBP18.25■□□□□ 0.51
SCRN1-205ENST00000425819 USP14P54578 494 aa18.25■□□□□ 0.51
SCRN1-205ENST00000425819 ADGRF4Q8IZF3 695 aa18.25■□□□□ 0.51
SCRN1-205ENST00000425819 RRP36Q96EU6 259 aaKnown RBP18.25■□□□□ 0.51
SCRN1-205ENST00000425819 PIGSQ96S52 555 aa18.25■□□□□ 0.51
SCRN1-205ENST00000425819 GBA2Q9HCG7 927 aaPredicted RBP18.25■□□□□ 0.51
SCRN1-205ENST00000425819 EMILIN3Q9NT22 766 aa18.25■□□□□ 0.51
SCRN1-205ENST00000425819 RBM27Q9P2N5 1060 aaKnown RBP18.25■□□□□ 0.51
SCRN1-205ENST00000425819 AFG3L2Q9Y4W6 797 aa18.25■□□□□ 0.51
SCRN1-205ENST00000425819 OTOFQ9HC10 1997 aa18.25■□□□□ 0.51
SCRN1-205ENST00000425819 SCG2P13521 617 aa18.25■□□□□ 0.51
SCRN1-205ENST00000425819 HMGCS2P54868 508 aa18.25■□□□□ 0.51
SCRN1-205ENST00000425819 TRIM29Q14134 588 aa18.25■□□□□ 0.51
SCRN1-205ENST00000425819 PFKFB3Q16875 520 aaPredicted RBP18.25■□□□□ 0.51
SCRN1-205ENST00000425819 LDLRAD1Q5T700 205 aa18.25■□□□□ 0.51
SCRN1-205ENST00000425819 LPAR1Q92633 364 aa18.25■□□□□ 0.51
SCRN1-205ENST00000425819 OTUD5Q96G74 571 aa18.25■□□□□ 0.51
SCRN1-205ENST00000425819 JMJD4Q9H9V9 463 aa18.25■□□□□ 0.51
SCRN1-205ENST00000425819 KIF3CO14782 793 aa18.24■□□□□ 0.51
SCRN1-205ENST00000425819 PDIA4P13667 645 aaKnown RBP18.24■□□□□ 0.51
SCRN1-205ENST00000425819 KRT40Q6A162 431 aa18.24■□□□□ 0.51
SCRN1-205ENST00000425819 ERO1BQ86YB8 467 aa18.24■□□□□ 0.51
SCRN1-205ENST00000425819 C2orf69Q8N8R5 385 aa18.24■□□□□ 0.51
SCRN1-205ENST00000425819 FBXO18Q8NFZ0 1043 aa18.24■□□□□ 0.51
SCRN1-205ENST00000425819 VPS54Q9P1Q0 977 aa18.24■□□□□ 0.51
SCRN1-205ENST00000425819 SEC63Q9UGP8 760 aaKnown RBP18.24■□□□□ 0.51
SCRN1-205ENST00000425819 SPDYE5A6NIY4 337 aa18.23■□□□□ 0.51
SCRN1-205ENST00000425819 C19orf81C9J6K1 198 aa18.23■□□□□ 0.51
SCRN1-205ENST00000425819 WDR46O15213 610 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms