RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 OTOFQ9HC10 1997 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 SPDYE5A6NIY4 337 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 FAM155AB1AL88 458 aaPredicted RBP8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 GH2P01242 217 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 SLC3A2P08195 630 aaKnown RBP8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ASNSP08243 561 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 NOVP48745 357 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 HTRA3P83110 453 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 FUT2Q10981 343 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ABCB5Q2M3G0 1257 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 MFSD6Q6ZSS7 791 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 RASAL3Q86YV0 1011 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ZNF444Q8N0Y2 327 aaPredicted RBP8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 NEDD1Q8NHV4 660 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 IL17RAQ96F46 866 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 TRIM34Q9BYJ4 488 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ELP3Q9H9T3 547 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ZNF287Q9HBT7 754 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ZBTB21Q9ULJ3 1066 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 AFG3L2Q9Y4W6 797 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CSADQ9Y600 493 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 PLIN4Q96Q06 1357 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 USP17L5A8MUK1 530 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 EIF5BO60841 1220 aaKnown RBP8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 SLC4A3P48751 1232 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 NT5C2P49902 561 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ZNF157P51786 506 aaPredicted RBP8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 TFAP4Q01664 338 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 PPATQ06203 517 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 SEPT2Q15019 361 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 DEFB115Q30KQ5 88 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ADCK5Q3MIX3 580 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 KMT5BQ4FZB7 885 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 FAM47AQ5JRC9 791 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 SPRYD7Q5W111 196 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 TMEM179Q6ZVK1 233 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CCDC84Q86UT8 332 aaPredicted RBP8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ERO1BQ86YB8 467 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 DNAJC5GQ8N7S2 189 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 HLA-CQ95604 372 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 OPTNQ96CV9 577 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 WNK4Q96J92 1243 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 WDR18Q9BV38 432 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 TMUB1Q9BVT8 246 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 BACH2Q9BYV9 841 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 RNF41Q9H4P4 317 aaPredicted RBP8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CNNM2Q9H8M5 875 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 IL17RBQ9NRM6 502 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 TCP11L1Q9NUJ3 509 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ZSWIM5Q9P217 1185 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ABT1Q9ULW3 272 aaKnown RBP8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 KCNH4Q9UQ05 1017 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 SNX14Q9Y5W7 946 aa8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 GREB1LQ9C091 1923 aaPredicted RBP8.35□□□□□ -1.07
CHCHD3P1-201ENST00000425516 PHIPQ8WWQ0 1821 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 A0A1W2PRG0 241 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 B4E1Z4 1266 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ZBTB48P10074 688 aaPredicted RBP8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CD46P15529 392 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ANTXR2P58335 489 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 PPIL2Q13356 520 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 MOGSQ13724 837 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 SH3D19Q5HYK7 790 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 RNF20Q5VTR2 975 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 RCSD1Q6JBY9 416 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CYP4F22Q6NT55 531 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CYB5R4Q7L1T6 521 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 MB21D2Q8IYB1 491 aaPredicted RBP8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ACER1Q8TDN7 264 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ESR2Q92731 530 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 MKL1Q969V6 931 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 EMID1Q96A84 441 aaPredicted RBP8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ZIC5Q96T25 663 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 TBC1D2Q9BYX2 928 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 KRT23Q9C075 422 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 KANSL2Q9H9L4 492 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CABP5Q9NP86 173 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 PICK1Q9NRD5 415 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 MTMR4Q9NYA4 1195 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 NYAP2Q9P242 653 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ZHX2Q9Y6X8 837 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 DOCK1Q14185 1865 aa8.34□□□□□ -1.07
CHCHD3P1-201ENST00000425516 TSPY2A6NKD2 308 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 MPHOSPH10O00566 681 aaKnown RBP8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 CXCL11O14625 94 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 RANBP6O60518 1105 aaKnown RBP8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 NMT2O60551 498 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 KDM4AO75164 1064 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TSPY3P0CV98 308 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 TSPY8P0CW00 308 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 EEF2P13639 858 aaKnown RBP8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 GCGRP47871 477 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 VEGFBP49765 207 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 EXOSC10Q01780 885 aaKnown RBP8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 SPP2Q13103 211 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 RAB3GAP1Q15042 981 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 SEC23AQ15436 765 aa8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 RRP12Q5JTH9 1297 aaKnown RBP8.33□□□□□ -1.08
CHCHD3P1-201ENST00000425516 CLEC10AQ8IUN9 316 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms