RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 KRT32Q14532 448 aa17.4■□□□□ 0.38
TMEM248-204ENST00000424964 ARHGEF6Q15052 776 aa17.4■□□□□ 0.38
TMEM248-204ENST00000424964 FAM110CQ1W6H9 321 aa17.4■□□□□ 0.38
TMEM248-204ENST00000424964 CCDC96Q2M329 555 aa17.4■□□□□ 0.38
TMEM248-204ENST00000424964 IFIT1BQ5T764 474 aaKnown RBP17.4■□□□□ 0.38
TMEM248-204ENST00000424964 MB21D2Q8IYB1 491 aaPredicted RBP17.4■□□□□ 0.38
TMEM248-204ENST00000424964 RASEFQ8IZ41 740 aa17.4■□□□□ 0.38
TMEM248-204ENST00000424964 ANKS1AQ92625 1134 aa17.4■□□□□ 0.38
TMEM248-204ENST00000424964 GMCL1Q96IK5 515 aa17.4■□□□□ 0.38
TMEM248-204ENST00000424964 USP26Q9BXU7 913 aa17.4■□□□□ 0.38
TMEM248-204ENST00000424964 RBPJLQ9UBG7 517 aa17.4■□□□□ 0.38
TMEM248-204ENST00000424964 PEX10O60683 326 aa17.39■□□□□ 0.37
TMEM248-204ENST00000424964 MCM5P33992 734 aa17.39■□□□□ 0.37
TMEM248-204ENST00000424964 IKQ13123 557 aaPredicted RBP17.39■□□□□ 0.37
TMEM248-204ENST00000424964 TSGA10IPQ3SY00 556 aa17.39■□□□□ 0.37
TMEM248-204ENST00000424964 PNMA1Q8ND90 353 aa17.39■□□□□ 0.37
TMEM248-204ENST00000424964 GPRC5AQ8NFJ5 357 aa17.39■□□□□ 0.37
TMEM248-204ENST00000424964 DCAF4Q8WV16 495 aa17.39■□□□□ 0.37
TMEM248-204ENST00000424964 NEK1Q96PY6 1258 aa17.39■□□□□ 0.37
TMEM248-204ENST00000424964 TXNRD2Q9NNW7 524 aa17.39■□□□□ 0.37
TMEM248-204ENST00000424964 MORF4L1Q9UBU8 362 aa17.39■□□□□ 0.37
TMEM248-204ENST00000424964 FEM1BQ9UK73 627 aa17.39■□□□□ 0.37
TMEM248-204ENST00000424964 RABGAP1Q9Y3P9 1069 aa17.39■□□□□ 0.37
TMEM248-204ENST00000424964 TMEM232C9JQI7 657 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 PRC1O43663 620 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 FMNL1O95466 1100 aaPredicted RBP17.38■□□□□ 0.37
TMEM248-204ENST00000424964 PSMC4P43686 418 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 ANTXR2P58335 489 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 WTAPQ15007 396 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 SEC23AQ15436 765 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 TMEM67Q5HYA8 995 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 COL13A1Q5TAT6 717 aaPredicted RBP17.38■□□□□ 0.37
TMEM248-204ENST00000424964 LBX2Q6XYB7 198 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 KCTD1Q719H9 257 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 CTU1Q7Z7A3 348 aaKnown RBP17.38■□□□□ 0.37
TMEM248-204ENST00000424964 CCAR1Q8IX12 1150 aaKnown RBP17.38■□□□□ 0.37
TMEM248-204ENST00000424964 KIFC2Q96AC6 838 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 ATG4CQ96DT6 458 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 SLF1Q9BQI6 1058 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 EFCC1Q9HA90 598 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 PPP1R9AQ9ULJ8 1098 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 TRIM17Q9Y577 477 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 SNX14Q9Y5W7 946 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 MYPNQ86TC9 1320 aa17.38■□□□□ 0.37
TMEM248-204ENST00000424964 RLFQ13129 1914 aa17.37■□□□□ 0.37
TMEM248-204ENST00000424964 FCGRTP55899 365 aa17.37■□□□□ 0.37
TMEM248-204ENST00000424964 ERVK-9P63128 1117 aa17.37■□□□□ 0.37
TMEM248-204ENST00000424964 ERVK-24P63145 666 aa17.37■□□□□ 0.37
TMEM248-204ENST00000424964 Q3C1V9 767 aa17.37■□□□□ 0.37
TMEM248-204ENST00000424964 ADCK5Q3MIX3 580 aa17.37■□□□□ 0.37
TMEM248-204ENST00000424964 POTEEQ6S8J3 1075 aa17.37■□□□□ 0.37
TMEM248-204ENST00000424964 RASGRP2Q7LDG7 609 aa17.37■□□□□ 0.37
TMEM248-204ENST00000424964 MB21D1Q8N884 522 aa17.37■□□□□ 0.37
TMEM248-204ENST00000424964 PRPF38AQ8NAV1 312 aaKnown RBP17.37■□□□□ 0.37
TMEM248-204ENST00000424964 CHURC1Q8WUH1 139 aa17.37■□□□□ 0.37
TMEM248-204ENST00000424964 KCNB2Q92953 911 aa17.37■□□□□ 0.37
TMEM248-204ENST00000424964 ARHGAP39Q9C0H5 1083 aa17.37■□□□□ 0.37
TMEM248-204ENST00000424964 BTBD7Q9P203 1132 aa17.37■□□□□ 0.37
TMEM248-204ENST00000424964 CTDP1Q9Y5B0 961 aaPredicted RBP17.37■□□□□ 0.37
TMEM248-204ENST00000424964 PARP14Q460N5 1801 aa17.36■□□□□ 0.37
TMEM248-204ENST00000424964 CNMDO75829 334 aa17.36■□□□□ 0.37
TMEM248-204ENST00000424964 PDHBP11177 359 aa17.36■□□□□ 0.37
TMEM248-204ENST00000424964 STAT2P52630 851 aa17.36■□□□□ 0.37
TMEM248-204ENST00000424964 PLS1Q14651 629 aa17.36■□□□□ 0.37
TMEM248-204ENST00000424964 FAM160B2Q86V87 743 aa17.36■□□□□ 0.37
TMEM248-204ENST00000424964 IGDCC4Q8TDY8 1250 aa17.36■□□□□ 0.37
TMEM248-204ENST00000424964 TMEM87BQ96K49 555 aa17.36■□□□□ 0.37
TMEM248-204ENST00000424964 JAKMIP1Q96N16 626 aaKnown RBP17.36■□□□□ 0.37
TMEM248-204ENST00000424964 GPCPD1Q9NPB8 672 aa17.36■□□□□ 0.37
TMEM248-204ENST00000424964 FRMPD2Q68DX3 1309 aaPredicted RBP17.36■□□□□ 0.37
TMEM248-204ENST00000424964 MGAMO43451 1857 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 VWA5AO00534 786 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 ZBED4O75132 1171 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 HOXD10P28358 340 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 CTGFP29279 349 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 CCNA1P78396 465 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 CAP1Q01518 475 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 COL9A3Q14050 684 aaPredicted RBP17.35■□□□□ 0.37
TMEM248-204ENST00000424964 DHX32Q7L7V1 743 aaKnown RBP17.35■□□□□ 0.37
TMEM248-204ENST00000424964 OTOP1Q7RTM1 612 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 TRIM47Q96LD4 638 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 MTA3Q9BTC8 594 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 LRRC2Q9BYS8 371 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 SENP2Q9HC62 589 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 CWC22Q9HCG8 908 aaKnown RBP17.35■□□□□ 0.37
TMEM248-204ENST00000424964 ADAMTS5Q9UNA0 930 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 ZSWIM8A7E2V4 1837 aa17.35■□□□□ 0.37
TMEM248-204ENST00000424964 TNPO2O14787 897 aaKnown RBP17.34■□□□□ 0.37
TMEM248-204ENST00000424964 PLA2G6O60733 806 aa17.34■□□□□ 0.37
TMEM248-204ENST00000424964 SEC24BO95487 1268 aa17.34■□□□□ 0.37
TMEM248-204ENST00000424964 HMGB1P09429 215 aaKnown RBP17.34■□□□□ 0.37
TMEM248-204ENST00000424964 ZNF543Q08ER8 600 aa17.34■□□□□ 0.37
TMEM248-204ENST00000424964 WDR78Q5VTH9 848 aa17.34■□□□□ 0.37
TMEM248-204ENST00000424964 TTBK2Q6IQ55 1244 aa17.34■□□□□ 0.37
TMEM248-204ENST00000424964 NFXL1Q6ZNB6 911 aa17.34■□□□□ 0.37
TMEM248-204ENST00000424964 TMTC2Q8N394 836 aa17.34■□□□□ 0.37
TMEM248-204ENST00000424964 SPATC1LQ9H0A9 340 aa17.34■□□□□ 0.37
TMEM248-204ENST00000424964 GPHNQ9NQX3 736 aaPredicted RBP17.34■□□□□ 0.37
TMEM248-204ENST00000424964 DOCK3Q8IZD9 2030 aa17.33■□□□□ 0.37
TMEM248-204ENST00000424964 COL11A1P12107 1806 aaPredicted RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms