RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
LINC00839-201ENST00000424751 USP28Q96RU2 1077 aa16.42■□□□□ 0.22
LINC00839-201ENST00000424751 MAD2L2Q9UI95 211 aa16.42■□□□□ 0.22
LINC00839-201ENST00000424751 FRMPD2Q68DX3 1309 aaPredicted RBP16.42■□□□□ 0.22
LINC00839-201ENST00000424751 USP17L5A8MUK1 530 aa16.42■□□□□ 0.22
LINC00839-201ENST00000424751 PCP11498 1178 aaKnown RBP16.42■□□□□ 0.22
LINC00839-201ENST00000424751 CDC25BP30305 580 aa16.42■□□□□ 0.22
LINC00839-201ENST00000424751 TMTC3Q6ZXV5 915 aa16.42■□□□□ 0.22
LINC00839-201ENST00000424751 MIGA2Q7L4E1 593 aa16.42■□□□□ 0.22
LINC00839-201ENST00000424751 SYT17Q9BSW7 474 aa16.42■□□□□ 0.22
LINC00839-201ENST00000424751 MRIQ9BWK5 157 aa16.42■□□□□ 0.22
LINC00839-201ENST00000424751 KAT14Q9H8E8 782 aa16.42■□□□□ 0.22
LINC00839-201ENST00000424751 GREB1LQ9C091 1923 aaPredicted RBP16.41■□□□□ 0.22
LINC00839-201ENST00000424751 DHX16O60231 1041 aaKnown RBP16.41■□□□□ 0.22
LINC00839-201ENST00000424751 ATP2B2Q01814 1243 aa16.41■□□□□ 0.22
LINC00839-201ENST00000424751 NR5A1Q13285 461 aa16.41■□□□□ 0.22
LINC00839-201ENST00000424751 EARS2Q5JPH6 523 aaKnown RBP16.41■□□□□ 0.22
LINC00839-201ENST00000424751 PRAMEF18Q5VWM3 479 aa16.41■□□□□ 0.22
LINC00839-201ENST00000424751 IGSF3O75054 1194 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 ZNF165P49910 485 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 KIF23Q02241 960 aaPredicted RBP16.4■□□□□ 0.22
LINC00839-201ENST00000424751 LRMPQ12912 555 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 SOGA3Q5TF21 947 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 SIAH1Q8IUQ4 282 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 TMTC2Q8N394 836 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 GPKOWQ92917 476 aaPredicted RBP eCLIP16.4■□□□□ 0.22
LINC00839-201ENST00000424751 PGBD1Q96JS3 809 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 CLIP2Q9UDT6 1046 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 CLIC4Q9Y696 253 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 POLR2AP24928 1970 aaKnown RBP16.4■□□□□ 0.22
LINC00839-201ENST00000424751 IGKV6D-41A0A0C4DH26 115 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 BTBD18B2RXH4 712 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 WNT7AO00755 349 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 NEMFO60524 1076 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 TPD52L1Q16890 204 aaPredicted RBP16.4■□□□□ 0.22
LINC00839-201ENST00000424751 TYW1BQ6NUM6 668 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 LEO1Q8WVC0 666 aaPredicted RBP16.4■□□□□ 0.22
LINC00839-201ENST00000424751 UBA5Q9GZZ9 404 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 MYOZ2Q9NPC6 264 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 MTMR4Q9NYA4 1195 aa16.4■□□□□ 0.22
LINC00839-201ENST00000424751 TAF3Q5VWG9 929 aa16.39■□□□□ 0.21
LINC00839-201ENST00000424751 CERS3Q8IU89 383 aa16.39■□□□□ 0.21
LINC00839-201ENST00000424751 MICALL2Q8IY33 904 aa16.39■□□□□ 0.21
LINC00839-201ENST00000424751 ZBED3Q96IU2 234 aaPredicted RBP16.39■□□□□ 0.21
LINC00839-201ENST00000424751 CSRNP1Q96S65 589 aa16.39■□□□□ 0.21
LINC00839-201ENST00000424751 MTA3Q9BTC8 594 aa16.39■□□□□ 0.21
LINC00839-201ENST00000424751 FZD9O00144 591 aa16.39■□□□□ 0.21
LINC00839-201ENST00000424751 GABPB1Q06547 395 aaPredicted RBP16.39■□□□□ 0.21
LINC00839-201ENST00000424751 SEPT2Q15019 361 aa16.39■□□□□ 0.21
LINC00839-201ENST00000424751 SPDYE2Q495Y8 402 aa16.39■□□□□ 0.21
LINC00839-201ENST00000424751 GRIPAP1Q4V328 841 aa16.39■□□□□ 0.21
LINC00839-201ENST00000424751 DGKHQ86XP1 1220 aa16.39■□□□□ 0.21
LINC00839-201ENST00000424751 OGFOD1Q8N543 542 aa16.39■□□□□ 0.21
LINC00839-201ENST00000424751 TCP11L1Q9NUJ3 509 aa16.39■□□□□ 0.21
LINC00839-201ENST00000424751 NRBP1Q9UHY1 535 aa16.39■□□□□ 0.21
LINC00839-201ENST00000424751 TAL1P17542 331 aaPredicted RBP16.38■□□□□ 0.21
LINC00839-201ENST00000424751 TTBK2Q6IQ55 1244 aa16.38■□□□□ 0.21
LINC00839-201ENST00000424751 BICD2Q8TD16 824 aa16.38■□□□□ 0.21
LINC00839-201ENST00000424751 ANKS1AQ92625 1134 aa16.38■□□□□ 0.21
LINC00839-201ENST00000424751 VAT1LQ9HCJ6 419 aa16.38■□□□□ 0.21
LINC00839-201ENST00000424751 SMCHD1A6NHR9 2005 aa16.38■□□□□ 0.21
LINC00839-201ENST00000424751 DDAH1O94760 285 aa16.38■□□□□ 0.21
LINC00839-201ENST00000424751 NPY5RQ15761 445 aa16.38■□□□□ 0.21
LINC00839-201ENST00000424751 TRPM4Q8TD43 1214 aa16.38■□□□□ 0.21
LINC00839-201ENST00000424751 GOLGA6L19H0YKK7 550 aa16.37■□□□□ 0.21
LINC00839-201ENST00000424751 RAD21O60216 631 aa16.37■□□□□ 0.21
LINC00839-201ENST00000424751 HLA-DOAP06340 250 aa16.37■□□□□ 0.21
LINC00839-201ENST00000424751 GRM4Q14833 912 aa16.37■□□□□ 0.21
LINC00839-201ENST00000424751 CEP135Q66GS9 1140 aa16.37■□□□□ 0.21
LINC00839-201ENST00000424751 AGBL3Q8NEM8 1001 aa16.37■□□□□ 0.21
LINC00839-201ENST00000424751 PGAP2Q9UHJ9 254 aa16.37■□□□□ 0.21
LINC00839-201ENST00000424751 CNOT7Q9UIV1 285 aaKnown RBP16.37■□□□□ 0.21
LINC00839-201ENST00000424751 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.36■□□□□ 0.21
LINC00839-201ENST00000424751 SARM1Q6SZW1 724 aa16.36■□□□□ 0.21
LINC00839-201ENST00000424751 CTCFLQ8NI51 663 aaPredicted RBP16.36■□□□□ 0.21
LINC00839-201ENST00000424751 CACTINQ8WUQ7 758 aaKnown RBP16.36■□□□□ 0.21
LINC00839-201ENST00000424751 NUP88Q99567 741 aaPredicted RBP16.36■□□□□ 0.21
LINC00839-201ENST00000424751 DNAJC25Q9H1X3 360 aa16.36■□□□□ 0.21
LINC00839-201ENST00000424751 GPCPD1Q9NPB8 672 aa16.36■□□□□ 0.21
LINC00839-201ENST00000424751 PI4KBQ9UBF8 816 aa16.36■□□□□ 0.21
LINC00839-201ENST00000424751 DDX41Q9UJV9 622 aaKnown RBP16.36■□□□□ 0.21
LINC00839-201ENST00000424751 MYO3BQ8WXR4 1341 aa16.36■□□□□ 0.21
LINC00839-201ENST00000424751 NR1I2O75469 434 aa16.36■□□□□ 0.21
LINC00839-201ENST00000424751 CDKL5O76039 1030 aa16.36■□□□□ 0.21
LINC00839-201ENST00000424751 SLC16A2P36021 539 aa16.36■□□□□ 0.21
LINC00839-201ENST00000424751 KIAA1755Q5JYT7 1200 aa16.36■□□□□ 0.21
LINC00839-201ENST00000424751 CFAP45Q9UL16 551 aa16.36■□□□□ 0.21
LINC00839-201ENST00000424751 STK36Q9NRP7 1315 aa16.36■□□□□ 0.21
LINC00839-201ENST00000424751 GH2P01242 217 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 EEF2P13639 858 aaKnown RBP16.35■□□□□ 0.21
LINC00839-201ENST00000424751 EPS15P42566 896 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 NOVP48745 357 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 SNAP25P60880 206 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 CERKLQ49MI3 558 aaPredicted RBP16.35■□□□□ 0.21
LINC00839-201ENST00000424751 CPLX2Q6PUV4 134 aaKnown RBP16.35■□□□□ 0.21
LINC00839-201ENST00000424751 KCTD1Q719H9 257 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 RASGRP4Q8TDF6 673 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 MRFAP1L1Q96HT8 127 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 HDAC9Q9UKV0 1011 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 DICER1Q9UPY3 1922 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms