RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 ERVK-24P63145 666 aa12.9□□□□□ -0.34
TOP3B-203ENST00000424393 ARHGEF6Q15052 776 aa12.9□□□□□ -0.34
TOP3B-203ENST00000424393 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
TOP3B-203ENST00000424393 RCSD1Q6JBY9 416 aa12.9□□□□□ -0.34
TOP3B-203ENST00000424393 GPRC5AQ8NFJ5 357 aa12.9□□□□□ -0.34
TOP3B-203ENST00000424393 ATG4CQ96DT6 458 aa12.9□□□□□ -0.34
TOP3B-203ENST00000424393 ZKSCAN3Q9BRR0 538 aa12.9□□□□□ -0.34
TOP3B-203ENST00000424393 FBXO28Q9NVF7 368 aa12.9□□□□□ -0.34
TOP3B-203ENST00000424393 SRRDQ9UH36 339 aa12.9□□□□□ -0.34
TOP3B-203ENST00000424393 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
TOP3B-203ENST00000424393 DOCK3Q8IZD9 2030 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 MYPNQ86TC9 1320 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 TNPO2O14787 897 aaKnown RBP12.89□□□□□ -0.35
TOP3B-203ENST00000424393 NT5C2P49902 561 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 PRKCZQ05513 592 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 SLFN13Q68D06 897 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 KIAA1211Q6ZU35 1233 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 STOX1Q6ZVD7 989 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 RASGRP2Q7LDG7 609 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 TMEM47Q9BQJ4 181 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 TMEM106CQ9BVX2 250 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 KRT23Q9C075 422 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 PORCNQ9H237 461 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 ANO2Q9NQ90 1003 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 HOXC10Q9NYD6 342 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 GABRQQ9UN88 632 aa12.89□□□□□ -0.35
TOP3B-203ENST00000424393 E7EWF7 191 aa12.88□□□□□ -0.35
TOP3B-203ENST00000424393 TOP1P11387 765 aaKnown RBP12.88□□□□□ -0.35
TOP3B-203ENST00000424393 PRMT2P55345 433 aa12.88□□□□□ -0.35
TOP3B-203ENST00000424393 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
TOP3B-203ENST00000424393 CASC1Q6TDU7 716 aa12.88□□□□□ -0.35
TOP3B-203ENST00000424393 CYB5R4Q7L1T6 521 aa12.88□□□□□ -0.35
TOP3B-203ENST00000424393 CHMP4CQ96CF2 233 aa12.88□□□□□ -0.35
TOP3B-203ENST00000424393 CNNM2Q9H8M5 875 aa12.88□□□□□ -0.35
TOP3B-203ENST00000424393 ZSWIM5Q9P217 1185 aa12.88□□□□□ -0.35
TOP3B-203ENST00000424393 PPP1R9AQ9ULJ8 1098 aa12.88□□□□□ -0.35
TOP3B-203ENST00000424393 ADAMTS5Q9UNA0 930 aa12.88□□□□□ -0.35
TOP3B-203ENST00000424393 POTEFA5A3E0 1075 aa12.87□□□□□ -0.35
TOP3B-203ENST00000424393 BMP3P12645 472 aa12.87□□□□□ -0.35
TOP3B-203ENST00000424393 MCCP23508 829 aa12.87□□□□□ -0.35
TOP3B-203ENST00000424393 HOXD10P28358 340 aa12.87□□□□□ -0.35
TOP3B-203ENST00000424393 NECTIN1Q15223 517 aa12.87□□□□□ -0.35
TOP3B-203ENST00000424393 DGKHQ86XP1 1220 aa12.87□□□□□ -0.35
TOP3B-203ENST00000424393 MB21D1Q8N884 522 aa12.87□□□□□ -0.35
TOP3B-203ENST00000424393 REPS2Q8NFH8 660 aa12.87□□□□□ -0.35
TOP3B-203ENST00000424393 GMCL1Q96IK5 515 aa12.87□□□□□ -0.35
TOP3B-203ENST00000424393 TTC14Q96N46 770 aa12.87□□□□□ -0.35
TOP3B-203ENST00000424393 ZSCAN10Q96SZ4 725 aaPredicted RBP12.87□□□□□ -0.35
TOP3B-203ENST00000424393 SLF1Q9BQI6 1058 aa12.87□□□□□ -0.35
TOP3B-203ENST00000424393 TNKSO95271 1327 aa12.87□□□□□ -0.35
TOP3B-203ENST00000424393 TMEM232C9JQI7 657 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 VWA5AO00534 786 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 SLC27A2O14975 620 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 MAPK4P31152 587 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 SLC1A4P43007 532 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 FLT3LGP49771 235 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 TMEM132BQ14DG7 1078 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 GPR142Q7Z601 462 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 IQCA1Q86XH1 822 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 ANKS1AQ92625 1134 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 COA7Q96BR5 231 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 MOV10L1Q9BXT6 1211 aaKnown RBP12.86□□□□□ -0.35
TOP3B-203ENST00000424393 SPATC1LQ9H0A9 340 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 GJD2Q9UKL4 321 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 MTMR7Q9Y216 660 aa12.86□□□□□ -0.35
TOP3B-203ENST00000424393 KIAA0100Q14667 2235 aaKnown RBP12.85□□□□□ -0.35
TOP3B-203ENST00000424393 CCNA1P78396 465 aa12.85□□□□□ -0.35
TOP3B-203ENST00000424393 TRDNQ13061 729 aa12.85□□□□□ -0.35
TOP3B-203ENST00000424393 IRF5Q13568 498 aa12.85□□□□□ -0.35
TOP3B-203ENST00000424393 COL9A3Q14050 684 aaPredicted RBP12.85□□□□□ -0.35
TOP3B-203ENST00000424393 SEC23AQ15436 765 aa12.85□□□□□ -0.35
TOP3B-203ENST00000424393 CCDC178Q5BJE1 867 aa12.85□□□□□ -0.35
TOP3B-203ENST00000424393 CREB3L3Q68CJ9 461 aa12.85□□□□□ -0.35
TOP3B-203ENST00000424393 KCTD1Q719H9 257 aa12.85□□□□□ -0.35
TOP3B-203ENST00000424393 PLEKHH3Q7Z736 793 aa12.85□□□□□ -0.35
TOP3B-203ENST00000424393 MB21D2Q8IYB1 491 aaPredicted RBP12.85□□□□□ -0.35
TOP3B-203ENST00000424393 ENAHQ8N8S7 591 aaPredicted RBP12.85□□□□□ -0.35
TOP3B-203ENST00000424393 PRPF38AQ8NAV1 312 aaKnown RBP12.85□□□□□ -0.35
TOP3B-203ENST00000424393 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
TOP3B-203ENST00000424393 RAET1EQ8TD07 263 aa12.85□□□□□ -0.35
TOP3B-203ENST00000424393 DCAF4Q8WV16 495 aa12.85□□□□□ -0.35
TOP3B-203ENST00000424393 KIFC2Q96AC6 838 aa12.85□□□□□ -0.35
TOP3B-203ENST00000424393 FEM1BQ9UK73 627 aa12.85□□□□□ -0.35
TOP3B-203ENST00000424393 ZNF214Q9UL59 606 aaPredicted RBP12.85□□□□□ -0.35
TOP3B-203ENST00000424393 ZNF236Q9UL36 1845 aa12.84□□□□□ -0.35
TOP3B-203ENST00000424393 SNHG28P0DPA3 235 aa12.84□□□□□ -0.35
TOP3B-203ENST00000424393 PDHBP11177 359 aa12.84□□□□□ -0.35
TOP3B-203ENST00000424393 ANTXR2P58335 489 aa12.84□□□□□ -0.35
TOP3B-203ENST00000424393 PLS1Q14651 629 aa12.84□□□□□ -0.35
TOP3B-203ENST00000424393 MORN1Q5T089 497 aa12.84□□□□□ -0.35
TOP3B-203ENST00000424393 RALYLQ86SE5 291 aaKnown RBP12.84□□□□□ -0.35
TOP3B-203ENST00000424393 CCAR1Q8IX12 1150 aaKnown RBP12.84□□□□□ -0.35
TOP3B-203ENST00000424393 SHCBP1Q8NEM2 672 aa12.84□□□□□ -0.35
TOP3B-203ENST00000424393 SH3TC2Q8TF17 1288 aa12.84□□□□□ -0.35
TOP3B-203ENST00000424393 USP6NLQ92738 828 aa12.84□□□□□ -0.35
TOP3B-203ENST00000424393 ARMC5Q96C12 935 aa12.84□□□□□ -0.35
TOP3B-203ENST00000424393 UBAC1Q9BSL1 405 aa12.84□□□□□ -0.35
TOP3B-203ENST00000424393 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
TOP3B-203ENST00000424393 FRMPD2Q68DX3 1309 aaPredicted RBP12.84□□□□□ -0.35
TOP3B-203ENST00000424393 ADCY3O60266 1144 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms