RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 PATL2C9JE40 543 aaKnown RBP8.37□□□□□ -1.07
EPHA4-206ENST00000424339 WDHD1O75717 1129 aaPredicted RBP8.37□□□□□ -1.07
EPHA4-206ENST00000424339 USP5P45974 858 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 ALX1Q15699 326 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 NBPF9Q3BBW0 867 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 EAPPQ56P03 285 aaPredicted RBP8.37□□□□□ -1.07
EPHA4-206ENST00000424339 CDC37L1Q7L3B6 337 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 SKAP1Q86WV1 359 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 FAM151AQ8WW52 585 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 FAM227BQ96M60 508 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 ESYT1Q9BSJ8 1104 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 TDRD3Q9H7E2 651 aaKnown RBP8.37□□□□□ -1.07
EPHA4-206ENST00000424339 NMRK2Q9NPI5 230 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 ENAMQ9NRM1 1142 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 GGA3Q9NZ52 723 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 ARPP21Q9UBL0 812 aaPredicted RBP8.37□□□□□ -1.07
EPHA4-206ENST00000424339 CTNNA3Q9UI47 895 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 SLC4A4Q9Y6R1 1079 aa8.37□□□□□ -1.07
EPHA4-206ENST00000424339 FLT1P17948 1338 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 SHTN1A0MZ66 631 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 TOMM70O94826 608 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 EGFRP00533 1210 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 HLA-DOAP06340 250 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 PCP11498 1178 aaKnown RBP8.36□□□□□ -1.07
EPHA4-206ENST00000424339 NF2P35240 595 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 HIRAP54198 1017 aaPredicted RBP8.36□□□□□ -1.07
EPHA4-206ENST00000424339 SUPT20HL1Q3ZLR7 823 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 ANGEL2Q5VTE6 544 aaKnown RBP8.36□□□□□ -1.07
EPHA4-206ENST00000424339 LYPD4Q6UWN0 246 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 KRT26Q7Z3Y9 468 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 TTC6Q86TZ1 520 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 CCDC116Q8IYX3 515 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 LCORLQ8N3X6 602 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 SMC1BQ8NDV3 1235 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 SH3RF3Q8TEJ3 882 aaPredicted RBP8.36□□□□□ -1.07
EPHA4-206ENST00000424339 TGFBRAP1Q8WUH2 860 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 OSBPL5Q9H0X9 879 aaPredicted RBP8.36□□□□□ -1.07
EPHA4-206ENST00000424339 NAPBQ9H115 298 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 ARMT1Q9H993 441 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 VEZTQ9HBM0 779 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 ZNF287Q9HBT7 754 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 DCP1AQ9NPI6 582 aaPredicted RBP8.36□□□□□ -1.07
EPHA4-206ENST00000424339 NAV1Q8NEY1 1877 aa8.36□□□□□ -1.07
EPHA4-206ENST00000424339 DDX60LQ5H9U9 1706 aaKnown RBP8.35□□□□□ -1.07
EPHA4-206ENST00000424339 MYH1P12882 1939 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 CLRN2A0PK11 232 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 UNCXA6NJT0 531 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 M0R2C6 588 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 APPP05067 770 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 SLC3A2P08195 630 aaKnown RBP8.35□□□□□ -1.07
EPHA4-206ENST00000424339 HSPD1P10809 573 aaKnown RBP8.35□□□□□ -1.07
EPHA4-206ENST00000424339 TDO2P48775 406 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 DYNLL1P63167 89 aaKnown RBP8.35□□□□□ -1.07
EPHA4-206ENST00000424339 FSTL1Q12841 308 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 RASA3Q14644 834 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 SBK1Q52WX2 424 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 RNF20Q5VTR2 975 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 DCAF15Q66K64 600 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 ZNF784Q8NCA9 323 aaPredicted RBP8.35□□□□□ -1.07
EPHA4-206ENST00000424339 ZNF526Q8TF50 670 aaPredicted RBP8.35□□□□□ -1.07
EPHA4-206ENST00000424339 SEC62Q99442 399 aaKnown RBP8.35□□□□□ -1.07
EPHA4-206ENST00000424339 DEFB129Q9H1M3 183 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 EHD4Q9H223 541 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 PI4KBQ9UBF8 816 aa8.35□□□□□ -1.07
EPHA4-206ENST00000424339 MKRN1Q9UHC7 482 aaKnown RBP8.35□□□□□ -1.07
EPHA4-206ENST00000424339 HERC5Q9UII4 1024 aaKnown RBP8.35□□□□□ -1.07
EPHA4-206ENST00000424339 POLR2AP24928 1970 aaKnown RBP8.34□□□□□ -1.07
EPHA4-206ENST00000424339 GSG1L2A8MUP6 293 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 TCP10L2B9ZVM9 353 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 F12P00748 615 aaPredicted RBP8.34□□□□□ -1.07
EPHA4-206ENST00000424339 POLR3DP05423 398 aaPredicted RBP8.34□□□□□ -1.07
EPHA4-206ENST00000424339 FKBP1BP68106 108 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 IMMTQ16891 758 aaKnown RBP8.34□□□□□ -1.07
EPHA4-206ENST00000424339 PLA2G4EQ3MJ16 856 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 ZNF589Q86UQ0 364 aaPredicted RBP8.34□□□□□ -1.07
EPHA4-206ENST00000424339 METTL16Q86W50 562 aaKnown RBP8.34□□□□□ -1.07
EPHA4-206ENST00000424339 FOXP4Q8IVH2 680 aaPredicted RBP8.34□□□□□ -1.07
EPHA4-206ENST00000424339 ZSCAN29Q8IWY8 852 aaPredicted RBP8.34□□□□□ -1.07
EPHA4-206ENST00000424339 IFNL3Q8IZI9 196 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 ARMC2Q8NEN0 867 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 IL27Q8NEV9 243 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 SDR42E1Q8WUS8 393 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 MAP4K1Q92918 833 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 RNF41Q9H4P4 317 aaPredicted RBP8.34□□□□□ -1.07
EPHA4-206ENST00000424339 UPF2Q9HAU5 1272 aaKnown RBP8.34□□□□□ -1.07
EPHA4-206ENST00000424339 ANO2Q9NQ90 1003 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 PGPEP1Q9NXJ5 209 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 MCM9Q9NXL9 1143 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 SWAP70Q9UH65 585 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 CNTNAP1P78357 1384 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 ROBO3Q96MS0 1386 aa8.34□□□□□ -1.07
EPHA4-206ENST00000424339 LAMB1P07942 1786 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 PHF20L1A8MW92 1017 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 CFAP99D6REC4 459 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 SPINT1O43278 529 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 PPP1R12BO60237 982 aaPredicted RBP8.33□□□□□ -1.08
EPHA4-206ENST00000424339 FGAP02671 866 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 CHGBP05060 677 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 MCCP23508 829 aa8.33□□□□□ -1.08
EPHA4-206ENST00000424339 NFIAQ12857 509 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms