RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 KIF1BPQ96EK5 621 aa14.17□□□□□ -0.14
PLOD3-204ENST00000424135 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.17□□□□□ -0.14
PLOD3-204ENST00000424135 PDLIM7Q9NR12 457 aa14.17□□□□□ -0.14
PLOD3-204ENST00000424135 PAG1Q9NWQ8 432 aa14.17□□□□□ -0.14
PLOD3-204ENST00000424135 BAZ2AQ9UIF9 1905 aaKnown RBP14.16□□□□□ -0.14
PLOD3-204ENST00000424135 EEF2P13639 858 aaKnown RBP14.16□□□□□ -0.14
PLOD3-204ENST00000424135 EPHB4P54760 987 aa14.16□□□□□ -0.14
PLOD3-204ENST00000424135 CLASRPQ8N2M8 674 aaKnown RBP14.16□□□□□ -0.14
PLOD3-204ENST00000424135 MROH8Q9H579 483 aa14.16□□□□□ -0.14
PLOD3-204ENST00000424135 ZBTB40Q9NUA8 1239 aa14.16□□□□□ -0.14
PLOD3-204ENST00000424135 SWAP70Q9UH65 585 aa14.16□□□□□ -0.14
PLOD3-204ENST00000424135 ADAMTS5Q9UNA0 930 aa14.16□□□□□ -0.14
PLOD3-204ENST00000424135 COG6Q9Y2V7 657 aa14.16□□□□□ -0.14
PLOD3-204ENST00000424135 KBTBD13C9JR72 458 aa14.15□□□□□ -0.14
PLOD3-204ENST00000424135 PGK1P00558 417 aa14.15□□□□□ -0.14
PLOD3-204ENST00000424135 TLE2Q04725 743 aa14.15□□□□□ -0.14
PLOD3-204ENST00000424135 HSP90AB4PQ58FF6 505 aa14.15□□□□□ -0.14
PLOD3-204ENST00000424135 MB21D1Q8N884 522 aa14.15□□□□□ -0.14
PLOD3-204ENST00000424135 REPS2Q8NFH8 660 aa14.15□□□□□ -0.14
PLOD3-204ENST00000424135 NUP88Q99567 741 aaPredicted RBP14.15□□□□□ -0.14
PLOD3-204ENST00000424135 TTYH1Q9H313 450 aaPredicted RBP14.15□□□□□ -0.14
PLOD3-204ENST00000424135 ARHGEF10LQ9HCE6 1279 aa14.15□□□□□ -0.14
PLOD3-204ENST00000424135 SMCHD1A6NHR9 2005 aa14.15□□□□□ -0.14
PLOD3-204ENST00000424135 PARP14Q460N5 1801 aa14.15□□□□□ -0.14
PLOD3-204ENST00000424135 WDR46O15213 610 aaKnown RBP14.14□□□□□ -0.15
PLOD3-204ENST00000424135 SMARCA5O60264 1052 aaPredicted RBP14.14□□□□□ -0.15
PLOD3-204ENST00000424135 FCER1AP12319 257 aa14.14□□□□□ -0.15
PLOD3-204ENST00000424135 ATP5JP18859 108 aa14.14□□□□□ -0.15
PLOD3-204ENST00000424135 IRX5P78411 483 aaPredicted RBP14.14□□□□□ -0.15
PLOD3-204ENST00000424135 CTR9Q6PD62 1173 aa14.14□□□□□ -0.15
PLOD3-204ENST00000424135 C16orf86Q6ZW13 317 aa14.14□□□□□ -0.15
PLOD3-204ENST00000424135 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.14□□□□□ -0.15
PLOD3-204ENST00000424135 ABRAQ8N0Z2 381 aa14.14□□□□□ -0.15
PLOD3-204ENST00000424135 STK11IPQ8N1F8 1099 aa14.14□□□□□ -0.15
PLOD3-204ENST00000424135 MMP19Q99542 508 aa14.14□□□□□ -0.15
PLOD3-204ENST00000424135 CDX2Q99626 313 aaPredicted RBP14.14□□□□□ -0.15
PLOD3-204ENST00000424135 HAUS7Q99871 368 aa14.14□□□□□ -0.15
PLOD3-204ENST00000424135 PUS7LQ9H0K6 701 aaKnown RBP14.14□□□□□ -0.15
PLOD3-204ENST00000424135 ATP8A2Q9NTI2 1148 aa14.14□□□□□ -0.15
PLOD3-204ENST00000424135 PRKAG2Q9UGJ0 569 aa14.14□□□□□ -0.15
PLOD3-204ENST00000424135 COL11A1P12107 1806 aaPredicted RBP14.13□□□□□ -0.15
PLOD3-204ENST00000424135 VWA5AO00534 786 aa14.13□□□□□ -0.15
PLOD3-204ENST00000424135 ZNF865P0CJ78 1059 aaPredicted RBP14.13□□□□□ -0.15
PLOD3-204ENST00000424135 ZNF792Q3KQV3 632 aa14.13□□□□□ -0.15
PLOD3-204ENST00000424135 FAM83BQ5T0W9 1011 aa14.13□□□□□ -0.15
PLOD3-204ENST00000424135 RIOX2Q8IUF8 465 aa14.13□□□□□ -0.15
PLOD3-204ENST00000424135 RPAP2Q8IXW5 612 aaPredicted RBP14.13□□□□□ -0.15
PLOD3-204ENST00000424135 TINF2Q9BSI4 451 aa14.13□□□□□ -0.15
PLOD3-204ENST00000424135 SEMA6BQ9H3T3 888 aa14.13□□□□□ -0.15
PLOD3-204ENST00000424135 XPNPEP3Q9NQH7 507 aa14.13□□□□□ -0.15
PLOD3-204ENST00000424135 ZNF214Q9UL59 606 aaPredicted RBP14.13□□□□□ -0.15
PLOD3-204ENST00000424135 PHF24Q9UPV7 400 aa14.13□□□□□ -0.15
PLOD3-204ENST00000424135 SLC4A4Q9Y6R1 1079 aa14.13□□□□□ -0.15
PLOD3-204ENST00000424135 ZBED9Q6R2W3 1325 aa14.13□□□□□ -0.15
PLOD3-204ENST00000424135 ZNFX1Q9P2E3 1918 aaKnown RBP14.12□□□□□ -0.15
PLOD3-204ENST00000424135 RAD21O60216 631 aa14.12□□□□□ -0.15
PLOD3-204ENST00000424135 STAT3P40763 770 aa14.12□□□□□ -0.15
PLOD3-204ENST00000424135 ZNF697Q5TEC3 545 aa14.12□□□□□ -0.15
PLOD3-204ENST00000424135 MYLIPQ8WY64 445 aa14.12□□□□□ -0.15
PLOD3-204ENST00000424135 CCDC17Q96LX7 622 aa14.12□□□□□ -0.15
PLOD3-204ENST00000424135 PPP1R9AQ9ULJ8 1098 aa14.12□□□□□ -0.15
PLOD3-204ENST00000424135 RIPK3Q9Y572 518 aa14.12□□□□□ -0.15
PLOD3-204ENST00000424135 MYADML2A6NDP7 307 aa14.11□□□□□ -0.15
PLOD3-204ENST00000424135 SLC25A27O95847 323 aa14.11□□□□□ -0.15
PLOD3-204ENST00000424135 UBE3CQ15386 1083 aa14.11□□□□□ -0.15
PLOD3-204ENST00000424135 C1orf53Q5VUE5 145 aa14.11□□□□□ -0.15
PLOD3-204ENST00000424135 SH2D4AQ9H788 454 aa14.11□□□□□ -0.15
PLOD3-204ENST00000424135 KANSL2Q9H9L4 492 aa14.11□□□□□ -0.15
PLOD3-204ENST00000424135 SLC5A4Q9NY91 659 aa14.11□□□□□ -0.15
PLOD3-204ENST00000424135 MYH8P13535 1937 aa14.11□□□□□ -0.15
PLOD3-204ENST00000424135 A0A1W2PQ45 241 aaPredicted RBP14.1□□□□□ -0.15
PLOD3-204ENST00000424135 A0A1W2PQY0 241 aa14.1□□□□□ -0.15
PLOD3-204ENST00000424135 ADCY6O43306 1168 aa14.1□□□□□ -0.15
PLOD3-204ENST00000424135 PQBP1O60828 265 aaKnown RBP14.1□□□□□ -0.15
PLOD3-204ENST00000424135 RAB11FIP3O75154 756 aa14.1□□□□□ -0.15
PLOD3-204ENST00000424135 ADAMTS4O75173 837 aa14.1□□□□□ -0.15
PLOD3-204ENST00000424135 SNAI1O95863 264 aaPredicted RBP14.1□□□□□ -0.15
PLOD3-204ENST00000424135 RARBP10826 455 aa14.1□□□□□ -0.15
PLOD3-204ENST00000424135 RASA1P20936 1047 aa14.1□□□□□ -0.15
PLOD3-204ENST00000424135 C20orf194Q5TEA3 1177 aa14.1□□□□□ -0.15
PLOD3-204ENST00000424135 TSHZ3Q63HK5 1081 aa14.1□□□□□ -0.15
PLOD3-204ENST00000424135 HMMRO75330 724 aa14.09□□□□□ -0.15
PLOD3-204ENST00000424135 NDUFB10O96000 172 aa14.09□□□□□ -0.15
PLOD3-204ENST00000424135 KCTD2Q14681 263 aa14.09□□□□□ -0.15
PLOD3-204ENST00000424135 STRBPQ96SI9 672 aaKnown RBP14.09□□□□□ -0.15
PLOD3-204ENST00000424135 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.09□□□□□ -0.156e-6■■■□□ 19.2
PLOD3-204ENST00000424135 GREB1LQ9C091 1923 aaPredicted RBP14.08□□□□□ -0.16
PLOD3-204ENST00000424135 CHD9Q3L8U1 2897 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 GSG1L2A8MUP6 293 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 KIAA0355O15063 1070 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 CLTBP09497 229 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 SLC4A3P48751 1232 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 SMAD3P84022 425 aaKnown RBP14.08□□□□□ -0.16
PLOD3-204ENST00000424135 FAAP100Q0VG06 881 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 CCSAPQ6IQ19 270 aaPredicted RBP14.08□□□□□ -0.16
PLOD3-204ENST00000424135 MAFAQ8NHW3 353 aaPredicted RBP14.08□□□□□ -0.16
PLOD3-204ENST00000424135 OSBP2Q969R2 916 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 FGD4Q96M96 766 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 SLF1Q9BQI6 1058 aa14.08□□□□□ -0.16
PLOD3-204ENST00000424135 EPB41L4AQ9HCS5 686 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms