RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 AGLP35573 1532 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 PTPRUQ92729 1446 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 PDE8AO60658 829 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 HOXC6P09630 235 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 CCL5P13501 91 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 IDEP14735 1019 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 SP4Q02446 784 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 CYP4A11Q02928 519 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 SF3A1Q15459 793 aaKnown RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 CFAP100Q494V2 611 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 FIBCD1Q8N539 461 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 GLMNQ92990 594 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 TMEM169Q96HH4 297 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 CSRNP1Q96S65 589 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 GZF1Q9H116 711 aaPredicted RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 KAT14Q9H8E8 782 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 C6orf50Q9HD87 102 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 ABI2Q9NYB9 513 aaPredicted RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 CPA4Q9UI42 421 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 ATP8B3O60423 1300 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 TSPY2A6NKD2 308 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 MYCLP12524 364 aaPredicted RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 COL9A1P20849 921 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 C21orf59P57076 290 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 CYP4A22Q5TCH4 519 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 FAM184AQ8NB25 1140 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 BAP1Q92560 729 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 SAMD11Q96NU1 681 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 OXCT2Q9BYC2 517 aaPredicted RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 RAB34Q9BZG1 259 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 INO80BQ9C086 356 aaPredicted RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 NUB1Q9Y5A7 615 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 DIP2BQ9P265 1576 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 CEP170BQ9Y4F5 1589 aaPredicted RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 HIP1O00291 1037 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 AOC2O75106 756 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 PPFIA3O75145 1194 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 SLU7O95391 586 aaKnown RBP4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ATF7P17544 494 aaPredicted RBP4.04□□□□□ -1.76
TOP2A-201ENST00000423485 TMEM132BQ14DG7 1078 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 COPS6Q7L5N1 327 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 DAAM2Q86T65 1068 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 RASEFQ8IZ41 740 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 UCMAQ8WVF2 138 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 SNX19Q92543 992 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ANO3Q9BYT9 981 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 BRD9Q9H8M2 597 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 KIF9Q9HAQ2 790 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 KCNG1Q9UIX4 513 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 USP17L15C9J2P7 530 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 USP17L13C9JLJ4 530 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 USP17L11C9JVI0 530 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 USP17L18D6R9N7 530 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 USP17L22D6RA61 530 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 USP17L17D6RBQ6 530 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 USP17L19D6RCP7 530 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 USP17L20D6RJB6 530 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 PES1O00541 588 aaKnown RBP4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ABL1P00519 1130 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 LRG1P02750 347 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ZNF18P17022 549 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ANXA13P27216 316 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 USP17L24Q0WX57 530 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 BIRC3Q13489 604 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 LRRC32Q14392 662 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 HABP4Q5JVS0 413 aaKnown RBP4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ARMCX5Q6P1M9 558 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 DEFB128Q7Z7B8 93 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ARHGEF1Q92888 912 aaKnown RBP4.04□□□□□ -1.76
TOP2A-201ENST00000423485 SYN1P17600 705 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 PAX3P23760 479 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 NPY2RP49146 381 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 NUCB1Q02818 461 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 AACSQ86V21 672 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 DNAJC10Q8IXB1 793 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 CCDC146Q8IYE0 955 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 METTL13Q8N6R0 699 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 TDRD5Q8NAT2 981 aaKnown RBP4.04□□□□□ -1.76
TOP2A-201ENST00000423485 CTCFLQ8NI51 663 aaPredicted RBP4.04□□□□□ -1.76
TOP2A-201ENST00000423485 TCF25Q9BQ70 676 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ALG1Q9BT22 464 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 TRIM5Q9C035 493 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 DYRK4Q9NR20 520 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ECHDC1Q9NTX5 307 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 RNF186Q9NXI6 227 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 CAMTA1Q9Y6Y1 1673 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ANKRD62A6NC57 917 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 KIF20AO95235 890 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 IL6STP40189 918 aaPredicted RBP4.04□□□□□ -1.76
TOP2A-201ENST00000423485 PLCD1P51178 756 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 GRAPQ13588 217 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 PPP2R5BQ15173 497 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ATP2B3Q16720 1220 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 TSR1Q2NL82 804 aaKnown RBP4.04□□□□□ -1.76
TOP2A-201ENST00000423485 SYCP2LQ5T4T6 812 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ANKRD23Q86SG2 305 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 NME9Q86XW9 330 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 GRAPLQ8TC17 118 aaPredicted RBP4.04□□□□□ -1.76
TOP2A-201ENST00000423485 CDCA5Q96FF9 252 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms