RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 REPS2Q8NFH8 660 aa18.42■□□□□ 0.54
SPC24-201ENST00000423327 NEDD1Q8NHV4 660 aa18.42■□□□□ 0.54
SPC24-201ENST00000423327 NKX2-3Q8TAU0 364 aa18.42■□□□□ 0.54
SPC24-201ENST00000423327 DEFB118Q96PH6 123 aa18.42■□□□□ 0.54
SPC24-201ENST00000423327 CRISPLD2Q9H0B8 497 aa18.42■□□□□ 0.54
SPC24-201ENST00000423327 CLIP2Q9UDT6 1046 aa18.42■□□□□ 0.54
SPC24-201ENST00000423327 ANAPC4Q9UJX5 808 aa18.42■□□□□ 0.54
SPC24-201ENST00000423327 PPP1R9AQ9ULJ8 1098 aa18.42■□□□□ 0.54
SPC24-201ENST00000423327 FRMPD3Q5JV73 1810 aa18.42■□□□□ 0.54
SPC24-201ENST00000423327 SLC15A5A6NIM6 579 aa18.41■□□□□ 0.54
SPC24-201ENST00000423327 F5H6K3 240 aa18.41■□□□□ 0.54
SPC24-201ENST00000423327 IGHA2P01877 340 aa18.41■□□□□ 0.54
SPC24-201ENST00000423327 HSPD1P10809 573 aaKnown RBP18.41■□□□□ 0.54
SPC24-201ENST00000423327 PRKAR2AP13861 404 aaKnown RBP18.41■□□□□ 0.54
SPC24-201ENST00000423327 ERCC3P19447 782 aa18.41■□□□□ 0.54
SPC24-201ENST00000423327 SDSP20132 328 aa18.41■□□□□ 0.54
SPC24-201ENST00000423327 PDE4BQ07343 736 aa18.41■□□□□ 0.54
SPC24-201ENST00000423327 KLRC3Q07444 240 aa18.41■□□□□ 0.54
SPC24-201ENST00000423327 SAMD1Q6SPF0 538 aaPredicted RBP18.41■□□□□ 0.54
SPC24-201ENST00000423327 CCAR1Q8IX12 1150 aaKnown RBP18.41■□□□□ 0.54
SPC24-201ENST00000423327 ZNF444Q8N0Y2 327 aaPredicted RBP18.41■□□□□ 0.54
SPC24-201ENST00000423327 LRRC47Q8N1G4 583 aaKnown RBP18.41■□□□□ 0.54
SPC24-201ENST00000423327 MB21D1Q8N884 522 aa18.41■□□□□ 0.54
SPC24-201ENST00000423327 NPLOC4Q8TAT6 608 aa18.41■□□□□ 0.54
SPC24-201ENST00000423327 MKL1Q969V6 931 aa18.41■□□□□ 0.54
SPC24-201ENST00000423327 CCDC171Q6TFL3 1326 aa18.41■□□□□ 0.54
SPC24-201ENST00000423327 ALPK3Q96L96 1907 aa18.41■□□□□ 0.54
SPC24-201ENST00000423327 LAMA4Q16363 1823 aa18.4■□□□□ 0.54
SPC24-201ENST00000423327 RAD21O60216 631 aa18.4■□□□□ 0.54
SPC24-201ENST00000423327 FGAP02671 866 aa18.4■□□□□ 0.54
SPC24-201ENST00000423327 HOXC6P09630 235 aa18.4■□□□□ 0.54
SPC24-201ENST00000423327 ZKSCAN1P17029 563 aaPredicted RBP18.4■□□□□ 0.54
SPC24-201ENST00000423327 TFAP4Q01664 338 aa18.4■□□□□ 0.54
SPC24-201ENST00000423327 CACNB2Q08289 660 aaPredicted RBP18.4■□□□□ 0.54
SPC24-201ENST00000423327 SHCBP1Q8NEM2 672 aa18.4■□□□□ 0.54
SPC24-201ENST00000423327 NBPF3Q9H094 633 aa18.4■□□□□ 0.54
SPC24-201ENST00000423327 ZNF287Q9HBT7 754 aa18.4■□□□□ 0.54
SPC24-201ENST00000423327 ZMYM6O95789 1325 aa18.4■□□□□ 0.54
SPC24-201ENST00000423327 RPTORQ8N122 1335 aa18.4■□□□□ 0.54
SPC24-201ENST00000423327 VWA5AO00534 786 aa18.39■□□□□ 0.53
SPC24-201ENST00000423327 NMT2O60551 498 aa18.39■□□□□ 0.53
SPC24-201ENST00000423327 FGRP09769 529 aa18.39■□□□□ 0.53
SPC24-201ENST00000423327 TSPY3P0CV98 308 aa18.39■□□□□ 0.53
SPC24-201ENST00000423327 TSPY8P0CW00 308 aa18.39■□□□□ 0.53
SPC24-201ENST00000423327 GSPT1P15170 499 aaKnown RBP18.39■□□□□ 0.53
SPC24-201ENST00000423327 IL25Q9H293 177 aa18.39■□□□□ 0.53
SPC24-201ENST00000423327 IL17RBQ9NRM6 502 aa18.39■□□□□ 0.53
SPC24-201ENST00000423327 ZNF214Q9UL59 606 aaPredicted RBP18.39■□□□□ 0.53
SPC24-201ENST00000423327 ZNFX1Q9P2E3 1918 aaKnown RBP18.39■□□□□ 0.53
SPC24-201ENST00000423327 CEP290O15078 2479 aa18.39■□□□□ 0.53
SPC24-201ENST00000423327 FARP2O94887 1054 aaPredicted RBP18.38■□□□□ 0.53
SPC24-201ENST00000423327 TTLL1O95922 423 aa18.38■□□□□ 0.53
SPC24-201ENST00000423327 ADORA2AP29274 412 aa18.38■□□□□ 0.53
SPC24-201ENST00000423327 CCND3P30281 292 aaPredicted RBP18.38■□□□□ 0.53
SPC24-201ENST00000423327 MNX1P50219 401 aaPredicted RBP18.38■□□□□ 0.53
SPC24-201ENST00000423327 PLS1Q14651 629 aa18.38■□□□□ 0.53
SPC24-201ENST00000423327 RASGRP2Q7LDG7 609 aa18.38■□□□□ 0.53
SPC24-201ENST00000423327 GMCL1P1Q8NEA9 526 aa18.38■□□□□ 0.53
SPC24-201ENST00000423327 DIS3LQ8TF46 1054 aaKnown RBP18.38■□□□□ 0.53
SPC24-201ENST00000423327 CWC22Q9HCG8 908 aaKnown RBP18.38■□□□□ 0.53
SPC24-201ENST00000423327 HMX1Q9NP08 348 aaPredicted RBP18.38■□□□□ 0.53
SPC24-201ENST00000423327 ORC4O43929 436 aa18.37■□□□□ 0.53
SPC24-201ENST00000423327 COBLO75128 1261 aa18.37■□□□□ 0.53
SPC24-201ENST00000423327 SLC3A2P08195 630 aaKnown RBP18.37■□□□□ 0.53
SPC24-201ENST00000423327 TBC1D10CQ8IV04 446 aa18.37■□□□□ 0.53
SPC24-201ENST00000423327 TRMT44Q8IYL2 757 aaKnown RBP18.37■□□□□ 0.53
SPC24-201ENST00000423327 SLF1Q9BQI6 1058 aa18.37■□□□□ 0.53
SPC24-201ENST00000423327 SYNPO2Q9UMS6 1093 aa18.37■□□□□ 0.53
SPC24-201ENST00000423327 IVNS1ABPQ9Y6Y0 642 aa18.37■□□□□ 0.53
SPC24-201ENST00000423327 NOVP48745 357 aa18.36■□□□□ 0.53
SPC24-201ENST00000423327 HAND2P61296 217 aa18.36■□□□□ 0.53
SPC24-201ENST00000423327 CWC27Q6UX04 472 aaKnown RBP18.36■□□□□ 0.53
SPC24-201ENST00000423327 NCAPG2Q86XI2 1143 aa18.36■□□□□ 0.53
SPC24-201ENST00000423327 RIOX2Q8IUF8 465 aa18.36■□□□□ 0.53
SPC24-201ENST00000423327 PLXNA1Q9UIW2 1896 aa18.35■□□□□ 0.53
SPC24-201ENST00000423327 TSPY2A6NKD2 308 aa18.35■□□□□ 0.53
SPC24-201ENST00000423327 TFRCP02786 760 aaKnown RBP18.35■□□□□ 0.53
SPC24-201ENST00000423327 TTC22Q5TAA0 569 aa18.35■□□□□ 0.53
SPC24-201ENST00000423327 LHX8Q68G74 356 aa18.35■□□□□ 0.53
SPC24-201ENST00000423327 TRPV1Q8NER1 839 aa18.35■□□□□ 0.53
SPC24-201ENST00000423327 MROH8Q9H579 483 aa18.35■□□□□ 0.53
SPC24-201ENST00000423327 STRNO43815 780 aa18.34■□□□□ 0.53
SPC24-201ENST00000423327 CYP2C19P33261 490 aa18.34■□□□□ 0.53
SPC24-201ENST00000423327 STAT3P40763 770 aa18.34■□□□□ 0.53
SPC24-201ENST00000423327 SLFN13Q68D06 897 aa18.34■□□□□ 0.53
SPC24-201ENST00000423327 OGDHLQ9ULD0 1010 aa18.34■□□□□ 0.53
SPC24-201ENST00000423327 RIPK3Q9Y572 518 aa18.34■□□□□ 0.53
SPC24-201ENST00000423327 NEDD4P46934 1319 aa18.33■□□□□ 0.53
SPC24-201ENST00000423327 RANBP6O60518 1105 aaKnown RBP18.33■□□□□ 0.52
SPC24-201ENST00000423327 SLC25A27O95847 323 aa18.33■□□□□ 0.52
SPC24-201ENST00000423327 CYBAP13498 195 aa18.33■□□□□ 0.52
SPC24-201ENST00000423327 ABRAQ8N0Z2 381 aa18.33■□□□□ 0.52
SPC24-201ENST00000423327 STAG1Q8WVM7 1258 aa18.33■□□□□ 0.52
SPC24-201ENST00000423327 CHMP4CQ96CF2 233 aa18.33■□□□□ 0.52
SPC24-201ENST00000423327 PAWRQ96IZ0 340 aaKnown RBP18.33■□□□□ 0.52
SPC24-201ENST00000423327 DIAPH3Q9NSV4 1193 aa18.33■□□□□ 0.52
SPC24-201ENST00000423327 STX8Q9UNK0 236 aa18.33■□□□□ 0.52
SPC24-201ENST00000423327 ATP2A1O14983 1001 aa18.32■□□□□ 0.52
SPC24-201ENST00000423327 BMP3P12645 472 aa18.32■□□□□ 0.52
SPC24-201ENST00000423327 OLFML2BQ68BL8 750 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 954.6 ms