RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 A0A0G2JMZ2 1700 aa19.89■□□□□ 0.77
COL7A1-202ENST00000422991 FGD1P98174 961 aa19.89■□□□□ 0.77
COL7A1-202ENST00000422991 FAM83BQ5T0W9 1011 aa19.89■□□□□ 0.77
COL7A1-202ENST00000422991 NFXL1Q6ZNB6 911 aa19.89■□□□□ 0.77
COL7A1-202ENST00000422991 ZNF654Q8IZM8 581 aa19.89■□□□□ 0.77
COL7A1-202ENST00000422991 DCAF4Q8WV16 495 aa19.89■□□□□ 0.77
COL7A1-202ENST00000422991 MTMR7Q9Y216 660 aa19.89■□□□□ 0.77
COL7A1-202ENST00000422991 CCDC69A6NI79 296 aa19.88■□□□□ 0.77
COL7A1-202ENST00000422991 PDHXO00330 501 aa19.88■□□□□ 0.77
COL7A1-202ENST00000422991 DDAH1O94760 285 aa19.88■□□□□ 0.77
COL7A1-202ENST00000422991 PDHBP11177 359 aa19.88■□□□□ 0.77
COL7A1-202ENST00000422991 HOXA7P31268 230 aaPredicted RBP19.88■□□□□ 0.77
COL7A1-202ENST00000422991 PABPC4Q13310 644 aaKnown RBP eCLIP19.88■□□□□ 0.77
COL7A1-202ENST00000422991 TOB2Q14106 344 aaPredicted RBP19.88■□□□□ 0.77
COL7A1-202ENST00000422991 RABEP1Q15276 862 aa19.88■□□□□ 0.77
COL7A1-202ENST00000422991 CATIPQ7Z7H3 387 aa19.88■□□□□ 0.77
COL7A1-202ENST00000422991 BRF1Q92994 677 aa19.88■□□□□ 0.77
COL7A1-202ENST00000422991 TANGO6Q9C0B7 1094 aa19.88■□□□□ 0.77
COL7A1-202ENST00000422991 ALDH8A1Q9H2A2 487 aaPredicted RBP19.88■□□□□ 0.77
COL7A1-202ENST00000422991 SAGE1Q9NXZ1 904 aa19.88■□□□□ 0.77
COL7A1-202ENST00000422991 TSKSQ9UJT2 592 aa19.88■□□□□ 0.77
COL7A1-202ENST00000422991 USP17L15C9J2P7 530 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 USP17L13C9JLJ4 530 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 USP17L11C9JVI0 530 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 USP17L18D6R9N7 530 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 USP17L22D6RA61 530 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 USP17L17D6RBQ6 530 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 USP17L19D6RCP7 530 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 USP17L20D6RJB6 530 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 BMP3P12645 472 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 SLC1A4P43007 532 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 NEK4P51957 841 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 USP17L24Q0WX57 530 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 TROAPQ12815 778 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 OTUD7BQ6GQQ9 843 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 APOA5Q6Q788 366 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 CATSPERGQ6ZRH7 1159 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 CHMP4CQ96CF2 233 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 BRPF3Q9ULD4 1205 aa19.87■□□□□ 0.77
COL7A1-202ENST00000422991 KLF18A0A0U1RQI7 1052 aa19.86■□□□□ 0.77
COL7A1-202ENST00000422991 ZNF543Q08ER8 600 aa19.86■□□□□ 0.77
COL7A1-202ENST00000422991 APOBRQ0VD83 1088 aa19.86■□□□□ 0.77
COL7A1-202ENST00000422991 CCDC96Q2M329 555 aa19.86■□□□□ 0.77
COL7A1-202ENST00000422991 MYL10Q9BUA6 226 aa19.86■□□□□ 0.77
COL7A1-202ENST00000422991 ASCC2Q9H1I8 757 aaPredicted RBP19.86■□□□□ 0.77
COL7A1-202ENST00000422991 SLC12A7Q9Y666 1083 aa19.86■□□□□ 0.77
COL7A1-202ENST00000422991 ALDH1A1P00352 501 aa19.85■□□□□ 0.77
COL7A1-202ENST00000422991 EVCP57679 992 aa19.85■□□□□ 0.77
COL7A1-202ENST00000422991 IRX3P78415 501 aaPredicted RBP19.85■□□□□ 0.77
COL7A1-202ENST00000422991 GRM4Q14833 912 aa19.85■□□□□ 0.77
COL7A1-202ENST00000422991 ASPRV1Q53RT3 343 aa19.85■□□□□ 0.77
COL7A1-202ENST00000422991 KCTD1Q719H9 257 aa19.85■□□□□ 0.77
COL7A1-202ENST00000422991 MAP3K14Q99558 947 aa19.85■□□□□ 0.77
COL7A1-202ENST00000422991 RNF186Q9NXI6 227 aa19.85■□□□□ 0.77
COL7A1-202ENST00000422991 PNMA3Q9UL41 463 aa19.85■□□□□ 0.77
COL7A1-202ENST00000422991 NID2Q14112 1375 aa19.84■□□□□ 0.77
COL7A1-202ENST00000422991 FRMPD2Q68DX3 1309 aaPredicted RBP19.84■□□□□ 0.77
COL7A1-202ENST00000422991 MYPNQ86TC9 1320 aa19.84■□□□□ 0.77
COL7A1-202ENST00000422991 COL11A1P12107 1806 aaPredicted RBP19.84■□□□□ 0.77
COL7A1-202ENST00000422991 PARP1P09874 1014 aaKnown RBP19.84■□□□□ 0.77
COL7A1-202ENST00000422991 OSBPP22059 807 aa19.84■□□□□ 0.77
COL7A1-202ENST00000422991 RCAN1P53805 252 aa19.84■□□□□ 0.77
COL7A1-202ENST00000422991 AK2P54819 239 aa19.84■□□□□ 0.77
COL7A1-202ENST00000422991 GPATCH4Q5T3I0 446 aaKnown RBP19.84■□□□□ 0.77
COL7A1-202ENST00000422991 MICU3Q86XE3 530 aa19.84■□□□□ 0.77
COL7A1-202ENST00000422991 PARK7Q99497 189 aaKnown RBP19.84■□□□□ 0.77
COL7A1-202ENST00000422991 FBXO28Q9NVF7 368 aa19.84■□□□□ 0.77
COL7A1-202ENST00000422991 ISY1Q9ULR0 285 aaKnown RBP19.84■□□□□ 0.77
COL7A1-202ENST00000422991 ADGRA2Q96PE1 1338 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 GOLGA8BA8MQT2 603 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 TMEM232C9JQI7 657 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 ZBTB43O43298 467 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 PLA2G6O60733 806 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 TRPA1O75762 1119 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 FLOT1O75955 427 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 CALM1P0DP23 149 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 CALM2P0DP24 149 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 CALM3P0DP25 149 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 CYP2C8P10632 490 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 RXRAP19793 462 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 STAT2P52630 851 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 ANKRD1Q15327 319 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 TAF1CQ15572 869 aaPredicted RBP19.83■□□□□ 0.77
COL7A1-202ENST00000422991 SYNE3Q6ZMZ3 975 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 RAB11FIP4Q86YS3 637 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 NUP133Q8WUM0 1156 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 SLF1Q9BQI6 1058 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 GPCPD1Q9NPB8 672 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 MAD2L2Q9UI95 211 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 FEM1BQ9UK73 627 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 PPP1R9AQ9ULJ8 1098 aa19.83■□□□□ 0.77
COL7A1-202ENST00000422991 PALM3A6NDB9 673 aaPredicted RBP19.82■□□□□ 0.76
COL7A1-202ENST00000422991 SPDYE16A6NNV3 312 aaPredicted RBP19.82■□□□□ 0.76
COL7A1-202ENST00000422991 GOLGA8HP0CJ92 632 aa19.82■□□□□ 0.76
COL7A1-202ENST00000422991 HERVK_113P62684 666 aa19.82■□□□□ 0.76
COL7A1-202ENST00000422991 TTBK2Q6IQ55 1244 aa19.82■□□□□ 0.76
COL7A1-202ENST00000422991 BTNL9Q6UXG8 535 aa19.82■□□□□ 0.76
COL7A1-202ENST00000422991 FAM160B2Q86V87 743 aa19.82■□□□□ 0.76
COL7A1-202ENST00000422991 STAG2Q8N3U4 1231 aa19.82■□□□□ 0.76
COL7A1-202ENST00000422991 IL27Q8NEV9 243 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms