RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 UBE2FQ969M7 185 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 NIF3L1Q9GZT8 377 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 DNAJC25Q9H1X3 360 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 SRCAPQ6ZRS2 3230 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 CNTNAP4Q9C0A0 1308 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 NCOA2Q15596 1464 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 TMEM2Q9UHN6 1383 aa7.74□□□□□ -1.17
SFXN1-202ENST00000421887 KDM5AP29375 1690 aaKnown RBP7.74□□□□□ -1.17
SFXN1-202ENST00000421887 H3BRB1 525 aa7.74□□□□□ -1.17
SFXN1-202ENST00000421887 FANCGO15287 622 aa7.74□□□□□ -1.17
SFXN1-202ENST00000421887 ICMTO60725 284 aa7.74□□□□□ -1.17
SFXN1-202ENST00000421887 SLITRK5O94991 958 aa7.74□□□□□ -1.17
SFXN1-202ENST00000421887 HK2P52789 917 aa7.74□□□□□ -1.17
SFXN1-202ENST00000421887 ZBTB37Q5TC79 503 aa7.74□□□□□ -1.17
SFXN1-202ENST00000421887 GLYCTKQ8IVS8 523 aa7.74□□□□□ -1.17
SFXN1-202ENST00000421887 CSRNP1Q96S65 589 aa7.74□□□□□ -1.17
SFXN1-202ENST00000421887 TUT1Q9H6E5 874 aaKnown RBP7.74□□□□□ -1.17
SFXN1-202ENST00000421887 RGS12O14924 1447 aa7.74□□□□□ -1.17
SFXN1-202ENST00000421887 SETBP1Q9Y6X0 1596 aa7.73□□□□□ -1.17
SFXN1-202ENST00000421887 DNAJC25-GNG10A0A024R161 153 aa7.73□□□□□ -1.17
SFXN1-202ENST00000421887 ATF3P18847 181 aa7.73□□□□□ -1.17
SFXN1-202ENST00000421887 ZNF252P-AS1Q0IIN9 211 aa7.73□□□□□ -1.17
SFXN1-202ENST00000421887 RALGPS1Q5JS13 557 aa7.73□□□□□ -1.17
SFXN1-202ENST00000421887 KCT2Q8NC54 265 aa7.73□□□□□ -1.17
SFXN1-202ENST00000421887 C8orf37Q96NL8 207 aa7.73□□□□□ -1.17
SFXN1-202ENST00000421887 FAM129BQ96TA1 746 aa7.73□□□□□ -1.17
SFXN1-202ENST00000421887 ZSWIM5Q9P217 1185 aa7.73□□□□□ -1.17
SFXN1-202ENST00000421887 ST14Q9Y5Y6 855 aa7.73□□□□□ -1.17
SFXN1-202ENST00000421887 PIK3C2BO00750 1634 aa7.73□□□□□ -1.17
SFXN1-202ENST00000421887 AHDC1Q5TGY3 1603 aaPredicted RBP7.72□□□□□ -1.17
SFXN1-202ENST00000421887 EIF2AK4Q9P2K8 1649 aaKnown RBP7.72□□□□□ -1.17
SFXN1-202ENST00000421887 A0A0G2JLL6 359 aaPredicted RBP7.72□□□□□ -1.17
SFXN1-202ENST00000421887 CARNS1A5YM72 827 aa7.72□□□□□ -1.17
SFXN1-202ENST00000421887 LRIG2O94898 1065 aa7.72□□□□□ -1.17
SFXN1-202ENST00000421887 CBX7O95931 251 aa7.72□□□□□ -1.17
SFXN1-202ENST00000421887 DBX2Q6ZNG2 339 aa7.72□□□□□ -1.17
SFXN1-202ENST00000421887 GRIN3AQ8TCU5 1115 aa7.72□□□□□ -1.17
SFXN1-202ENST00000421887 MIPEPQ99797 713 aa7.72□□□□□ -1.17
SFXN1-202ENST00000421887 EFCAB6Q5THR3 1501 aa7.72□□□□□ -1.17
SFXN1-202ENST00000421887 NWD1Q149M9 1564 aa7.71□□□□□ -1.17
SFXN1-202ENST00000421887 SYN1P17600 705 aa7.71□□□□□ -1.18
SFXN1-202ENST00000421887 RING1Q06587 406 aa7.71□□□□□ -1.18
SFXN1-202ENST00000421887 NLRP2Q9NX02 1062 aa7.71□□□□□ -1.18
SFXN1-202ENST00000421887 CAPN6Q9Y6Q1 641 aa7.71□□□□□ -1.18
SFXN1-202ENST00000421887 CHD2O14647 1828 aaKnown RBP7.71□□□□□ -1.18
SFXN1-202ENST00000421887 XRCC5P13010 732 aaKnown RBP7.7□□□□□ -1.18
SFXN1-202ENST00000421887 PI16Q6UXB8 463 aa7.7□□□□□ -1.18
SFXN1-202ENST00000421887 EGFL7Q9UHF1 273 aa7.7□□□□□ -1.18
SFXN1-202ENST00000421887 TMEM59LQ9UK28 342 aa7.7□□□□□ -1.18
SFXN1-202ENST00000421887 PCDHA4Q9UN74 947 aa7.7□□□□□ -1.18
SFXN1-202ENST00000421887 ADAMTS20P59510 1910 aa7.7□□□□□ -1.18
SFXN1-202ENST00000421887 TET3O43151 1660 aa7.7□□□□□ -1.18
SFXN1-202ENST00000421887 CAMSAP2Q08AD1 1489 aa7.69□□□□□ -1.18
SFXN1-202ENST00000421887 GPR182O15218 404 aa7.69□□□□□ -1.18
SFXN1-202ENST00000421887 PPP1R15AO75807 674 aaPredicted RBP7.69□□□□□ -1.18
SFXN1-202ENST00000421887 TRHRP34981 398 aaPredicted RBP7.69□□□□□ -1.18
SFXN1-202ENST00000421887 C22orf34Q6ZV56 151 aa7.69□□□□□ -1.18
SFXN1-202ENST00000421887 THAP5Q7Z6K1 395 aa7.69□□□□□ -1.18
SFXN1-202ENST00000421887 ZNF507Q8TCN5 953 aa7.69□□□□□ -1.18
SFXN1-202ENST00000421887 LRRC59Q96AG4 307 aaKnown RBP7.69□□□□□ -1.18
SFXN1-202ENST00000421887 ELMO3Q96BJ8 720 aa7.69□□□□□ -1.18
SFXN1-202ENST00000421887 BCO2Q9BYV7 579 aa7.69□□□□□ -1.18
SFXN1-202ENST00000421887 C19orf44Q9H6X5 657 aa7.69□□□□□ -1.18
SFXN1-202ENST00000421887 CACNA2D2Q9NY47 1150 aa7.69□□□□□ -1.18
SFXN1-202ENST00000421887 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.69□□□□□ -1.18
SFXN1-202ENST00000421887 NCOA3Q9Y6Q9 1424 aa7.69□□□□□ -1.18
SFXN1-202ENST00000421887 EHBP1L1Q8N3D4 1523 aa7.68□□□□□ -1.18
SFXN1-202ENST00000421887 PRAMEF27A3QJZ7 478 aa7.68□□□□□ -1.18
SFXN1-202ENST00000421887 NFIXQ14938 502 aa7.68□□□□□ -1.18
SFXN1-202ENST00000421887 ARHGEF5Q12774 1597 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 RBAK-RBAKDNI3L0D1 243 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 SRFP11831 508 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 DLG4P78352 724 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 ARHGAP4P98171 946 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 TMEM132EQ6IEE7 984 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 ZNF605Q86T29 641 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 RIN3Q8TB24 985 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 BAHD1Q8TBE0 780 aaPredicted RBP7.67□□□□□ -1.18
SFXN1-202ENST00000421887 CITED4Q96RK1 184 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 MCOLN1Q9GZU1 580 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 RNF32Q9H0A6 362 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 ADAMTS10Q9H324 1103 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 TRPC5Q9UL62 973 aaPredicted RBP7.67□□□□□ -1.18
SFXN1-202ENST00000421887 CNOT6Q9ULM6 557 aaKnown RBP7.67□□□□□ -1.18
SFXN1-202ENST00000421887 ARHGAP31Q2M1Z3 1444 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 DIP2AQ14689 1571 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 LRP5O75197 1615 aa7.67□□□□□ -1.18
SFXN1-202ENST00000421887 TRIM37O94972 964 aa7.66□□□□□ -1.18
SFXN1-202ENST00000421887 HPXP02790 462 aa7.66□□□□□ -1.18
SFXN1-202ENST00000421887 SERPINB4P48594 390 aa7.66□□□□□ -1.18
SFXN1-202ENST00000421887 BRINP3Q76B58 766 aa7.66□□□□□ -1.18
SFXN1-202ENST00000421887 FBRSQ9HAH7 460 aa7.66□□□□□ -1.18
SFXN1-202ENST00000421887 SAMM50Q9Y512 469 aa7.66□□□□□ -1.18
SFXN1-202ENST00000421887 KANK1Q14678 1352 aa7.66□□□□□ -1.18
SFXN1-202ENST00000421887 MROH1Q8NDA8 1641 aa7.66□□□□□ -1.18
SFXN1-202ENST00000421887 BMP6P22004 513 aa7.65□□□□□ -1.18
SFXN1-202ENST00000421887 IDI1Q13907 227 aa7.65□□□□□ -1.18
SFXN1-202ENST00000421887 CEP162Q5TB80 1403 aa7.65□□□□□ -1.18
SFXN1-202ENST00000421887 TCERG1LQ5VWI1 586 aa7.65□□□□□ -1.18
SFXN1-202ENST00000421887 LETMD1Q6P1Q0 360 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms