RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 BMP3P12645 472 aa18.51■□□□□ 0.55
BRAT1-202ENST00000421712 DSG3P32926 999 aa18.51■□□□□ 0.55
BRAT1-202ENST00000421712 FCGRTP55899 365 aa18.51■□□□□ 0.55
BRAT1-202ENST00000421712 SART3Q15020 963 aaKnown RBP18.51■□□□□ 0.55
BRAT1-202ENST00000421712 CCDC96Q2M329 555 aa18.51■□□□□ 0.55
BRAT1-202ENST00000421712 CHST3Q7LGC8 479 aa18.51■□□□□ 0.55
BRAT1-202ENST00000421712 ARHGAP39Q9C0H5 1083 aa18.51■□□□□ 0.55
BRAT1-202ENST00000421712 KAT14Q9H8E8 782 aa18.51■□□□□ 0.55
BRAT1-202ENST00000421712 CWC22Q9HCG8 908 aaKnown RBP18.51■□□□□ 0.55
BRAT1-202ENST00000421712 FBXO28Q9NVF7 368 aa18.51■□□□□ 0.55
BRAT1-202ENST00000421712 RBPJLQ9UBG7 517 aa18.51■□□□□ 0.55
BRAT1-202ENST00000421712 CTDP1Q9Y5B0 961 aaPredicted RBP18.51■□□□□ 0.55
BRAT1-202ENST00000421712 SPDYE16A6NNV3 312 aaPredicted RBP18.5■□□□□ 0.55
BRAT1-202ENST00000421712 NOVP48745 357 aa18.5■□□□□ 0.55
BRAT1-202ENST00000421712 PLS1Q14651 629 aa18.5■□□□□ 0.55
BRAT1-202ENST00000421712 IFIT1BQ5T764 474 aaKnown RBP18.5■□□□□ 0.55
BRAT1-202ENST00000421712 ENAHQ8N8S7 591 aaPredicted RBP18.5■□□□□ 0.55
BRAT1-202ENST00000421712 ATG4CQ96DT6 458 aa18.5■□□□□ 0.55
BRAT1-202ENST00000421712 TXNRD2Q9NNW7 524 aa18.5■□□□□ 0.55
BRAT1-202ENST00000421712 FEM1BQ9UK73 627 aa18.5■□□□□ 0.55
BRAT1-202ENST00000421712 RABGAP1Q9Y3P9 1069 aa18.5■□□□□ 0.55
BRAT1-202ENST00000421712 TMEM232C9JQI7 657 aa18.49■□□□□ 0.55
BRAT1-202ENST00000421712 HOXD10P28358 340 aa18.49■□□□□ 0.55
BRAT1-202ENST00000421712 ERVK-9P63128 1117 aa18.49■□□□□ 0.55
BRAT1-202ENST00000421712 ERVK-24P63145 666 aa18.49■□□□□ 0.55
BRAT1-202ENST00000421712 RCSD1Q6JBY9 416 aa18.49■□□□□ 0.55
BRAT1-202ENST00000421712 KCTD1Q719H9 257 aa18.49■□□□□ 0.55
BRAT1-202ENST00000421712 OTOP1Q7RTM1 612 aa18.49■□□□□ 0.55
BRAT1-202ENST00000421712 TNS4Q8IZW8 715 aa18.49■□□□□ 0.55
BRAT1-202ENST00000421712 DCAF4Q8WV16 495 aa18.49■□□□□ 0.55
BRAT1-202ENST00000421712 KIFC2Q96AC6 838 aa18.49■□□□□ 0.55
BRAT1-202ENST00000421712 GMCL1Q96IK5 515 aa18.49■□□□□ 0.55
BRAT1-202ENST00000421712 SLF1Q9BQI6 1058 aa18.49■□□□□ 0.55
BRAT1-202ENST00000421712 MORF4L1Q9UBU8 362 aa18.49■□□□□ 0.55
BRAT1-202ENST00000421712 TNPO2O14787 897 aaKnown RBP18.48■□□□□ 0.55
BRAT1-202ENST00000421712 MCM5P33992 734 aa18.48■□□□□ 0.55
BRAT1-202ENST00000421712 CCNA1P78396 465 aa18.48■□□□□ 0.55
BRAT1-202ENST00000421712 KRT32Q14532 448 aa18.48■□□□□ 0.55
BRAT1-202ENST00000421712 PKN2Q16513 984 aaKnown RBP18.48■□□□□ 0.55
BRAT1-202ENST00000421712 Q3C1V9 767 aa18.48■□□□□ 0.55
BRAT1-202ENST00000421712 WDR78Q5VTH9 848 aa18.48■□□□□ 0.55
BRAT1-202ENST00000421712 LBX2Q6XYB7 198 aa18.48■□□□□ 0.55
BRAT1-202ENST00000421712 MB21D1Q8N884 522 aa18.48■□□□□ 0.55
BRAT1-202ENST00000421712 PRPF38AQ8NAV1 312 aaKnown RBP18.48■□□□□ 0.55
BRAT1-202ENST00000421712 PNMA1Q8ND90 353 aa18.48■□□□□ 0.55
BRAT1-202ENST00000421712 CHURC1Q8WUH1 139 aa18.48■□□□□ 0.55
BRAT1-202ENST00000421712 BTBD7Q9P203 1132 aa18.48■□□□□ 0.55
BRAT1-202ENST00000421712 PPP1R9AQ9ULJ8 1098 aa18.48■□□□□ 0.55
BRAT1-202ENST00000421712 FRMPD2Q68DX3 1309 aaPredicted RBP18.48■□□□□ 0.55
BRAT1-202ENST00000421712 MYPNQ86TC9 1320 aa18.48■□□□□ 0.55
BRAT1-202ENST00000421712 PRC1O43663 620 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 GNRH1P01148 92 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 STAT2P52630 851 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 CAP1Q01518 475 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 WTAPQ15007 396 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 TMEM67Q5HYA8 995 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 FAM160B2Q86V87 743 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 MB21D2Q8IYB1 491 aaPredicted RBP18.47■□□□□ 0.55
BRAT1-202ENST00000421712 RASEFQ8IZ41 740 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 ANKS1AQ92625 1134 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 COA7Q96BR5 231 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 TRIM47Q96LD4 638 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 NEK1Q96PY6 1258 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 MCOLN1Q9GZU1 580 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 GPCPD1Q9NPB8 672 aa18.47■□□□□ 0.55
BRAT1-202ENST00000421712 EIF5BO60841 1220 aaKnown RBP18.46■□□□□ 0.55
BRAT1-202ENST00000421712 ZBED4O75132 1171 aa18.46■□□□□ 0.55
BRAT1-202ENST00000421712 CNMDO75829 334 aa18.46■□□□□ 0.55
BRAT1-202ENST00000421712 CTGFP29279 349 aa18.46■□□□□ 0.55
BRAT1-202ENST00000421712 HSPA4P34932 840 aa18.46■□□□□ 0.55
BRAT1-202ENST00000421712 SLC4A3P48751 1232 aa18.46■□□□□ 0.55
BRAT1-202ENST00000421712 POTEEQ6S8J3 1075 aa18.46■□□□□ 0.55
BRAT1-202ENST00000421712 RASGRP2Q7LDG7 609 aa18.46■□□□□ 0.55
BRAT1-202ENST00000421712 VWA5AO00534 786 aa18.45■□□□□ 0.54
BRAT1-202ENST00000421712 PDHBP11177 359 aa18.45■□□□□ 0.54
BRAT1-202ENST00000421712 MAPK4P31152 587 aa18.45■□□□□ 0.54
BRAT1-202ENST00000421712 SEC23AQ15436 765 aa18.45■□□□□ 0.54
BRAT1-202ENST00000421712 NFXL1Q6ZNB6 911 aa18.45■□□□□ 0.54
BRAT1-202ENST00000421712 USP26Q9BXU7 913 aa18.45■□□□□ 0.54
BRAT1-202ENST00000421712 SPATC1LQ9H0A9 340 aa18.45■□□□□ 0.54
BRAT1-202ENST00000421712 EPB41L2O43491 1005 aaKnown RBP18.44■□□□□ 0.54
BRAT1-202ENST00000421712 SLC16A2P36021 539 aa18.44■□□□□ 0.54
BRAT1-202ENST00000421712 ANTXR2P58335 489 aa18.44■□□□□ 0.54
BRAT1-202ENST00000421712 TMEM132BQ14DG7 1078 aa18.44■□□□□ 0.54
BRAT1-202ENST00000421712 TSGA10IPQ3SY00 556 aa18.44■□□□□ 0.54
BRAT1-202ENST00000421712 TTBK2Q6IQ55 1244 aa18.44■□□□□ 0.54
BRAT1-202ENST00000421712 FBXO46Q6PJ61 603 aaPredicted RBP18.44■□□□□ 0.54
BRAT1-202ENST00000421712 CPXCR1Q8N123 301 aa18.44■□□□□ 0.54
BRAT1-202ENST00000421712 RAET1EQ8TD07 263 aa18.44■□□□□ 0.54
BRAT1-202ENST00000421712 PORCNQ9H237 461 aa18.44■□□□□ 0.54
BRAT1-202ENST00000421712 SRRDQ9UH36 339 aa18.44■□□□□ 0.54
BRAT1-202ENST00000421712 ADAMTS5Q9UNA0 930 aa18.44■□□□□ 0.54
BRAT1-202ENST00000421712 PTPN22Q9Y2R2 807 aa18.44■□□□□ 0.54
BRAT1-202ENST00000421712 PARP1P09874 1014 aaKnown RBP18.43■□□□□ 0.54
BRAT1-202ENST00000421712 GOLGA8HP0CJ92 632 aa18.43■□□□□ 0.54
BRAT1-202ENST00000421712 ADCK5Q3MIX3 580 aa18.43■□□□□ 0.54
BRAT1-202ENST00000421712 CATIPQ7Z7H3 387 aa18.43■□□□□ 0.54
BRAT1-202ENST00000421712 NCAPG2Q86XI2 1143 aa18.43■□□□□ 0.54
BRAT1-202ENST00000421712 IGDCC4Q8TDY8 1250 aa18.43■□□□□ 0.54
BRAT1-202ENST00000421712 TMEM87BQ96K49 555 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms