RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-208	ENST00000421689	AGTPBP1	Q9UPW5	1226 aa		13.78	□□□□□ -0.2
CAST-208	ENST00000421689	USP17L15	C9J2P7	530 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	USP17L13	C9JLJ4	530 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	USP17L11	C9JVI0	530 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	USP17L18	D6R9N7	530 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	USP17L22	D6RA61	530 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	USP17L17	D6RBQ6	530 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	USP17L19	D6RCP7	530 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	USP17L20	D6RJB6	530 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	ZBTB43	O43298	467 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	AOC2	O75106	756 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	PARP1	P09874	1014 aa	Known RBP	13.77	□□□□□ -0.21
CAST-208	ENST00000421689	HOXA7	P31268	230 aa	Predicted RBP	13.77	□□□□□ -0.21
CAST-208	ENST00000421689	RCAN1	P53805	252 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	USP17L24	Q0WX57	530 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	FAM83B	Q5T0W9	1011 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	TREML2	Q5T2D2	321 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	OTUD7B	Q6GQQ9	843 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	GPAT2	Q6NUI2	795 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	ANKRD23	Q86SG2	305 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	NUP133	Q8WUM0	1156 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	ZIC5	Q96T25	663 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.77	□□□□□ -0.21
CAST-208	ENST00000421689	ZCCHC17	Q9NP64	241 aa	Known RBP	13.77	□□□□□ -0.21
CAST-208	ENST00000421689	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.77	□□□□□ -0.21
CAST-208	ENST00000421689	SLC45A1	Q9Y2W3	748 aa		13.77	□□□□□ -0.21
CAST-208	ENST00000421689	THSD7B	Q9C0I4	1608 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	BTBD19	C9JJ37	291 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	OSBP	P22059	807 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	KIF5B	P33176	963 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	ZNF543	Q08ER8	600 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	GRM4	Q14833	912 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	PPP2R5B	Q15173	497 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	CCDC96	Q2M329	555 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	ASPRV1	Q53RT3	343 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	GPATCH4	Q5T3I0	446 aa	Known RBP	13.76	□□□□□ -0.21
CAST-208	ENST00000421689	CATSPERG	Q6ZRH7	1159 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	IFNL1	Q8IU54	200 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	CTCFL	Q8NI51	663 aa	Predicted RBP	13.76	□□□□□ -0.21
CAST-208	ENST00000421689	CHMP4C	Q96CF2	233 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	ZNF274	Q96GC6	653 aa	Predicted RBP	13.76	□□□□□ -0.21
CAST-208	ENST00000421689	NUP88	Q99567	741 aa	Predicted RBP	13.76	□□□□□ -0.21
CAST-208	ENST00000421689	PTPN18	Q99952	460 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	MYL10	Q9BUA6	226 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	TANGO6	Q9C0B7	1094 aa		13.76	□□□□□ -0.21
CAST-208	ENST00000421689	ISY1	Q9ULR0	285 aa	Known RBP	13.76	□□□□□ -0.21
CAST-208	ENST00000421689	PALM3	A6NDB9	673 aa	Predicted RBP	13.75	□□□□□ -0.21
CAST-208	ENST00000421689	GOLGA8B	A8MQT2	603 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	TMEM232	C9JQI7	657 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	PDHX	O00330	501 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	PLA2G6	O60733	806 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	PDIA3	P30101	505 aa	Known RBP	13.75	□□□□□ -0.21
CAST-208	ENST00000421689	MCM2	P49736	904 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	KCTD1	Q719H9	257 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	RASGRP2	Q7LDG7	609 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	MICU3	Q86XE3	530 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	FANCB	Q8NB91	859 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	CHURC1	Q8WUH1	139 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	LARP6	Q9BRS8	491 aa	Known RBP	13.75	□□□□□ -0.21
CAST-208	ENST00000421689	GPCPD1	Q9NPB8	672 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	FEM1B	Q9UK73	627 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	PNMA3	Q9UL41	463 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	LIMCH1	Q9UPQ0	1083 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	PARP14	Q460N5	1801 aa		13.75	□□□□□ -0.21
CAST-208	ENST00000421689	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.74	□□□□□ -0.21
CAST-208	ENST00000421689	GOLGA8A	A7E2F4	631 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
CAST-208	ENST00000421689	FLOT1	O75955	427 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	ALDH1A1	P00352	501 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	GOLGA8H	P0CJ92	632 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	RXRA	P19793	462 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	GNAQ	P50148	359 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	METAP2	P50579	478 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
CAST-208	ENST00000421689	STAT2	P52630	851 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	IRX3	P78415	501 aa	Predicted RBP	13.74	□□□□□ -0.21
CAST-208	ENST00000421689	COG2	Q14746	738 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	RTN1	Q16799	776 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	BTNL9	Q6UXG8	535 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	NOL8	Q76FK4	1167 aa	Known RBP	13.74	□□□□□ -0.21
CAST-208	ENST00000421689	FAM160B2	Q86V87	743 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	RAB11FIP4	Q86YS3	637 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	CCDC144CP	Q8IYA2	1237 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	FAM43A	Q8N2R8	423 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.74	□□□□□ -0.21
CAST-208	ENST00000421689	RBM28	Q9NW13	759 aa	Known RBP	13.74	□□□□□ -0.21
CAST-208	ENST00000421689	HOXC10	Q9NYD6	342 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	MAD2L2	Q9UI95	211 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	TPCN1	Q9ULQ1	816 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	HPS5	Q9UPZ3	1129 aa		13.74	□□□□□ -0.21
CAST-208	ENST00000421689	NID2	Q14112	1375 aa		13.73	□□□□□ -0.21
CAST-208	ENST00000421689	MYPN	Q86TC9	1320 aa		13.73	□□□□□ -0.21
CAST-208	ENST00000421689	RLF	Q13129	1914 aa		13.73	□□□□□ -0.21
CAST-208	ENST00000421689	CCDC196	A0A1B0GTZ2	297 aa		13.73	□□□□□ -0.21
CAST-208	ENST00000421689	KLRF2	D3W0D1	207 aa		13.73	□□□□□ -0.21
CAST-208	ENST00000421689	HOXD11	P31277	338 aa	Predicted RBP	13.73	□□□□□ -0.21
CAST-208	ENST00000421689	IK	Q13123	557 aa	Predicted RBP	13.73	□□□□□ -0.21
CAST-208	ENST00000421689	STAG2	Q8N3U4	1231 aa		13.73	□□□□□ -0.21
CAST-208	ENST00000421689	DNAJC5G	Q8N7S2	189 aa		13.73	□□□□□ -0.21
CAST-208	ENST00000421689	PRPF38A	Q8NAV1	312 aa	Known RBP	13.73	□□□□□ -0.21
CAST-208	ENST00000421689	PARK7	Q99497	189 aa	Known RBP	13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms