RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 RAB11FIP3O75154 756 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 ATP5JP18859 108 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 LRRC41Q15345 812 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 FAM47AQ5JRC9 791 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 C9orf50Q5SZB4 431 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 SH3RF1Q7Z6J0 888 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 AMOTL1Q8IY63 956 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 ABRAQ8N0Z2 381 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 DDRGK1Q96HY6 314 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 CCDC17Q96LX7 622 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 GUCD1Q96NT3 240 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 MMP19Q99542 508 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 SH2D4AQ9H788 454 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 ZBTB40Q9NUA8 1239 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 SLC4A4Q9Y6R1 1079 aa11.29□□□□□ -0.6
SCRN1-204ENST00000421434 TRIM43BA6NCK2 446 aa11.28□□□□□ -0.6
SCRN1-204ENST00000421434 WDR46O15213 610 aaKnown RBP11.28□□□□□ -0.6
SCRN1-204ENST00000421434 SLC25A27O95847 323 aa11.28□□□□□ -0.6
SCRN1-204ENST00000421434 PGK1P00558 417 aa11.28□□□□□ -0.6
SCRN1-204ENST00000421434 MS4A1P11836 297 aa11.28□□□□□ -0.6
SCRN1-204ENST00000421434 TAL1P17542 331 aaPredicted RBP11.28□□□□□ -0.6
SCRN1-204ENST00000421434 STAT3P40763 770 aa11.28□□□□□ -0.6
SCRN1-204ENST00000421434 SLC4A3P48751 1232 aa11.28□□□□□ -0.6
SCRN1-204ENST00000421434 FAM109BQ6ICB4 259 aaPredicted RBP11.28□□□□□ -0.6
SCRN1-204ENST00000421434 CTR9Q6PD62 1173 aa11.28□□□□□ -0.6
SCRN1-204ENST00000421434 C16orf86Q6ZW13 317 aa11.28□□□□□ -0.6
SCRN1-204ENST00000421434 TRIM43Q96BQ3 446 aaPredicted RBP11.28□□□□□ -0.6
SCRN1-204ENST00000421434 HAUS7Q99871 368 aa11.28□□□□□ -0.6
SCRN1-204ENST00000421434 PUS7LQ9H0K6 701 aaKnown RBP11.28□□□□□ -0.6
SCRN1-204ENST00000421434 KANSL2Q9H9L4 492 aa11.28□□□□□ -0.6
SCRN1-204ENST00000421434 XPNPEP3Q9NQH7 507 aa11.28□□□□□ -0.6
SCRN1-204ENST00000421434 VWA5AO00534 786 aa11.27□□□□□ -0.61
SCRN1-204ENST00000421434 SMARCA5O60264 1052 aaPredicted RBP11.27□□□□□ -0.61
SCRN1-204ENST00000421434 RARBP10826 455 aa11.27□□□□□ -0.61
SCRN1-204ENST00000421434 TLE2Q04725 743 aa11.27□□□□□ -0.61
SCRN1-204ENST00000421434 KCTD2Q14681 263 aa11.27□□□□□ -0.61
SCRN1-204ENST00000421434 FAM83BQ5T0W9 1011 aa11.27□□□□□ -0.61
SCRN1-204ENST00000421434 ZNF697Q5TEC3 545 aa11.27□□□□□ -0.61
SCRN1-204ENST00000421434 NUP88Q99567 741 aaPredicted RBP11.27□□□□□ -0.61
SCRN1-204ENST00000421434 TINF2Q9BSI4 451 aa11.27□□□□□ -0.61
SCRN1-204ENST00000421434 GOPCQ9HD26 462 aa11.27□□□□□ -0.61
SCRN1-204ENST00000421434 PDLIM7Q9NR12 457 aa11.27□□□□□ -0.61
SCRN1-204ENST00000421434 DDX19BQ9UMR2 479 aa11.27□□□□□ -0.61
SCRN1-204ENST00000421434 ADAMTS5Q9UNA0 930 aa11.27□□□□□ -0.61
SCRN1-204ENST00000421434 ITGB8P26012 769 aa11.26□□□□□ -0.61
SCRN1-204ENST00000421434 SNX17Q15036 470 aa11.26□□□□□ -0.61
SCRN1-204ENST00000421434 UBE3CQ15386 1083 aa11.26□□□□□ -0.61
SCRN1-204ENST00000421434 RNF180Q86T96 592 aa11.26□□□□□ -0.61
SCRN1-204ENST00000421434 RIOX2Q8IUF8 465 aa11.26□□□□□ -0.61
SCRN1-204ENST00000421434 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.26□□□□□ -0.61
SCRN1-204ENST00000421434 LENG1Q96BZ8 264 aaPredicted RBP11.26□□□□□ -0.61
SCRN1-204ENST00000421434 CDX2Q99626 313 aaPredicted RBP11.26□□□□□ -0.61
SCRN1-204ENST00000421434 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.26□□□□□ -0.61
SCRN1-204ENST00000421434 COL25A1Q9BXS0 654 aaPredicted RBP11.26□□□□□ -0.61
SCRN1-204ENST00000421434 SEMA6BQ9H3T3 888 aa11.26□□□□□ -0.61
SCRN1-204ENST00000421434 PPP1R9AQ9ULJ8 1098 aa11.26□□□□□ -0.61
SCRN1-204ENST00000421434 NAV1Q8NEY1 1877 aa11.25□□□□□ -0.61
SCRN1-204ENST00000421434 RLFQ13129 1914 aa11.25□□□□□ -0.61
SCRN1-204ENST00000421434 SMCHD1A6NHR9 2005 aa11.25□□□□□ -0.61
SCRN1-204ENST00000421434 MINDY4BA8MYZ0 360 aa11.25□□□□□ -0.61
SCRN1-204ENST00000421434 PQBP1O60828 265 aaKnown RBP11.25□□□□□ -0.61
SCRN1-204ENST00000421434 ZNF792Q3KQV3 632 aa11.25□□□□□ -0.61
SCRN1-204ENST00000421434 ZSCAN25Q6NSZ9 544 aa11.25□□□□□ -0.61
SCRN1-204ENST00000421434 MKNK2Q9HBH9 465 aa11.25□□□□□ -0.61
SCRN1-204ENST00000421434 ZNF214Q9UL59 606 aaPredicted RBP11.25□□□□□ -0.61
SCRN1-204ENST00000421434 PHF24Q9UPV7 400 aa11.25□□□□□ -0.61
SCRN1-204ENST00000421434 TACC3Q9Y6A5 838 aa11.25□□□□□ -0.61
SCRN1-204ENST00000421434 ZBED9Q6R2W3 1325 aa11.25□□□□□ -0.61
SCRN1-204ENST00000421434 FRMPD3Q5JV73 1810 aa11.25□□□□□ -0.61
SCRN1-204ENST00000421434 VCANP13611 3396 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 F5H6K3 240 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 CLTBP09497 229 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 ZNF865P0CJ78 1059 aaPredicted RBP11.24□□□□□ -0.61
SCRN1-204ENST00000421434 RAG1P15918 1043 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 EPHB4P54760 987 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 KLRC3Q07444 240 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 C1orf53Q5VUE5 145 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 DIEXFQ68CQ4 756 aaKnown RBP11.24□□□□□ -0.61
SCRN1-204ENST00000421434 CPXCR1Q8N123 301 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 REPS2Q8NFH8 660 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 DDX11Q96FC9 970 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 STRBPQ96SI9 672 aaKnown RBP11.24□□□□□ -0.61
SCRN1-204ENST00000421434 SLF1Q9BQI6 1058 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 LRRCC1Q9C099 1032 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 TMEM39AQ9NV64 488 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 CLIP2Q9UDT6 1046 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 NRBP1Q9UHY1 535 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 CNPY2Q9Y2B0 182 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 DIS3Q9Y2L1 958 aaKnown RBP11.24□□□□□ -0.61
SCRN1-204ENST00000421434 RIPK3Q9Y572 518 aa11.24□□□□□ -0.61
SCRN1-204ENST00000421434 BAZ2AQ9UIF9 1905 aaKnown RBP11.23□□□□□ -0.61
SCRN1-204ENST00000421434 A0A1W2PQ45 241 aaPredicted RBP11.23□□□□□ -0.61
SCRN1-204ENST00000421434 A0A1W2PQY0 241 aa11.23□□□□□ -0.61
SCRN1-204ENST00000421434 GSG1L2A8MUP6 293 aa11.23□□□□□ -0.61
SCRN1-204ENST00000421434 AKR1A1P14550 325 aa11.23□□□□□ -0.61
SCRN1-204ENST00000421434 RASA1P20936 1047 aa11.23□□□□□ -0.61
SCRN1-204ENST00000421434 IRX5P78411 483 aaPredicted RBP11.23□□□□□ -0.61
SCRN1-204ENST00000421434 SMAD3P84022 425 aaKnown RBP11.23□□□□□ -0.61
SCRN1-204ENST00000421434 TSHZ3Q63HK5 1081 aa11.23□□□□□ -0.61
SCRN1-204ENST00000421434 SNRNP48Q6IEG0 339 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms