RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 ALDH8A1Q9H2A2 487 aaPredicted RBP16.36■□□□□ 0.21
CHRD-204ENST00000420973 SPATS2LQ9NUQ6 558 aaKnown RBP16.36■□□□□ 0.21
CHRD-204ENST00000420973 TSPY3P0CV98 308 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 TSPY8P0CW00 308 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 FAM160A1Q05DH4 1040 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 FNBP4Q8N3X1 1017 aaPredicted RBP16.35■□□□□ 0.21
CHRD-204ENST00000420973 LINC00301Q8NCQ3 95 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 ODF2LQ9ULJ1 636 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 AP1G2O75843 785 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 CACNB3P54284 484 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 NLRP5P59047 1200 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 CLEC10AQ8IUN9 316 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 ZNF384Q8TF68 577 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 ZSCAN10Q96SZ4 725 aaPredicted RBP16.35■□□□□ 0.21
CHRD-204ENST00000420973 GGA1Q9UJY5 639 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 RCOR1Q9UKL0 485 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 FAN1Q9Y2M0 1017 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 COBLO75128 1261 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 ZNF202O95125 648 aa16.35■□□□□ 0.21
CHRD-204ENST00000420973 CC2D1AQ6P1N0 951 aaPredicted RBP16.35■□□□□ 0.21
CHRD-204ENST00000420973 DCP1AQ9NPI6 582 aaPredicted RBP16.35■□□□□ 0.21
CHRD-204ENST00000420973 ABCC6O95255 1503 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 H3BQF6 201 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 PFKFB1P16118 471 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 CDC25AP30304 524 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 PDE4BQ07343 736 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 TCP10Q12799 353 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 PNOCQ13519 176 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 NYAP1Q6ZVC0 841 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 ZNF804AQ7Z570 1209 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 TEX11Q8IYF3 940 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 CNNM3Q8NE01 707 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 BORCS6Q96GS4 357 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 WDHD1O75717 1129 aaPredicted RBP16.34■□□□□ 0.21
CHRD-204ENST00000420973 GRIN1Q05586 938 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 KAT14Q9H8E8 782 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 SLIT2O94813 1529 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 LAMB4A4D0S4 1761 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 NHSL1Q5SYE7 1610 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 NUP98P52948 1817 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 TUBGCP6Q96RT7 1819 aa16.34■□□□□ 0.21
CHRD-204ENST00000420973 N4BP2Q86UW6 1770 aaPredicted RBP16.34■□□□□ 0.21
CHRD-204ENST00000420973 CASP1P29466 404 aa16.33■□□□□ 0.21
CHRD-204ENST00000420973 TXNRD1Q16881 649 aa16.33■□□□□ 0.21
CHRD-204ENST00000420973 AGXT2Q9BYV1 514 aa16.33■□□□□ 0.21
CHRD-204ENST00000420973 BIN2Q9UBW5 565 aaPredicted RBP16.33■□□□□ 0.21
CHRD-204ENST00000420973 ELP1O95163 1332 aa16.33■□□□□ 0.21
CHRD-204ENST00000420973 VEGFAP15692 232 aaPredicted RBP16.33■□□□□ 0.2
CHRD-204ENST00000420973 CEP57L1Q8IYX8 460 aa16.33■□□□□ 0.2
CHRD-204ENST00000420973 IQUBQ8NA54 791 aa16.33■□□□□ 0.2
CHRD-204ENST00000420973 KCNG4Q8TDN1 519 aa16.33■□□□□ 0.2
CHRD-204ENST00000420973 KAT2BQ92831 832 aa16.33■□□□□ 0.2
CHRD-204ENST00000420973 DBNDD1Q9H9R9 158 aa16.33■□□□□ 0.2
CHRD-204ENST00000420973 PRDM16Q9HAZ2 1276 aa16.33■□□□□ 0.2
CHRD-204ENST00000420973 PSD3Q9NYI0 1048 aa16.33■□□□□ 0.2
CHRD-204ENST00000420973 GRAPQ13588 217 aa16.33■□□□□ 0.2
CHRD-204ENST00000420973 DPCR1Q3MIW9 517 aa16.33■□□□□ 0.2
CHRD-204ENST00000420973 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.2
CHRD-204ENST00000420973 RIOK1Q9BRS2 568 aaKnown RBP16.33■□□□□ 0.2
CHRD-204ENST00000420973 ZC3H12CQ9C0D7 883 aaKnown RBP16.33■□□□□ 0.2
CHRD-204ENST00000420973 FAM107BQ9H098 131 aa16.33■□□□□ 0.2
CHRD-204ENST00000420973 PCDHB6Q9Y5E3 794 aa16.33■□□□□ 0.2
CHRD-204ENST00000420973 FAM196BA6NMK8 535 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 FOXN1O15353 648 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 GYS1P13807 737 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 XBP1P17861 261 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 HEATR3Q7Z4Q2 680 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 FAXDC2Q96IV6 333 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 ETAA1Q9NY74 926 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 CNTNAP4Q9C0A0 1308 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 TJP1Q07157 1748 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 ABCA3Q99758 1704 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 MCM7P33993 719 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 BTDP43251 543 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 ZC3H12AQ5D1E8 599 aaKnown RBP16.32■□□□□ 0.2
CHRD-204ENST00000420973 ZNF512BQ96KM6 892 aaPredicted RBP16.32■□□□□ 0.2
CHRD-204ENST00000420973 FAM217BQ9NTX9 383 aaPredicted RBP16.32■□□□□ 0.2
CHRD-204ENST00000420973 G3BP2Q9UN86 482 aaKnown RBP16.32■□□□□ 0.2
CHRD-204ENST00000420973 NEMFO60524 1076 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 EIF3JO75822 258 aaKnown RBP16.32■□□□□ 0.2
CHRD-204ENST00000420973 PIK3AP1Q6ZUJ8 805 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 ARMCX6Q7L4S7 300 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 DHX58Q96C10 678 aa16.32■□□□□ 0.2
CHRD-204ENST00000420973 MYO5AQ9Y4I1 1855 aaKnown RBP16.31■□□□□ 0.2
CHRD-204ENST00000420973 PES1O00541 588 aaKnown RBP16.31■□□□□ 0.2
CHRD-204ENST00000420973 BAG3O95817 575 aa16.31■□□□□ 0.2
CHRD-204ENST00000420973 POLR2DO15514 142 aaKnown RBP16.31■□□□□ 0.2
CHRD-204ENST00000420973 MMP10P09238 476 aa16.31■□□□□ 0.2
CHRD-204ENST00000420973 STX1AQ16623 288 aa16.31■□□□□ 0.2
CHRD-204ENST00000420973 FBXO33Q7Z6M2 555 aa16.31■□□□□ 0.2
CHRD-204ENST00000420973 KIAA0825Q8IV33 1275 aa16.31■□□□□ 0.2
CHRD-204ENST00000420973 CAPN7Q9Y6W3 813 aa16.31■□□□□ 0.2
CHRD-204ENST00000420973 PLCD1P51178 756 aa16.31■□□□□ 0.2
CHRD-204ENST00000420973 USP49Q70CQ1 688 aa16.31■□□□□ 0.2
CHRD-204ENST00000420973 BRAPQ7Z569 592 aa16.31■□□□□ 0.2
CHRD-204ENST00000420973 STAG1Q8WVM7 1258 aa16.31■□□□□ 0.2
CHRD-204ENST00000420973 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHRD-204ENST00000420973 CD248Q9HCU0 757 aa16.31■□□□□ 0.2
CHRD-204ENST00000420973 SHANK3Q9BYB0 1731 aa16.3■□□□□ 0.2
CHRD-204ENST00000420973 COL16A1Q07092 1604 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms