RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 DBNLQ9UJU6 430 aaKnown RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 AMOTL2Q9Y2J4 779 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 UBR1Q8IWV7 1749 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 NWD2Q9ULI1 1742 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 GOLGA6CA6NDK9 693 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 USP17L5A8MUK1 530 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 E7EWF7 191 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 GOLGA6DP0CG33 693 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 MARCKSP29966 332 aaPredicted RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 SYKP43405 635 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 AKAP17AQ02040 695 aaKnown RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 WLSQ5T9L3 541 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 NT5DC1Q5TFE4 455 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 RESP18Q5W5W9 173 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 NAIF1Q69YI7 327 aaPredicted RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 TTC19Q6DKK2 380 aaPredicted RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 OLFM4Q6UX06 510 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 RASGRP2Q7LDG7 609 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 CAPS2Q9BXY5 557 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 GOLGA6AQ9NYA3 693 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 NOVA2Q9UNW9 492 aaKnown RBP6.88□□□□□ -1.31
CHD2-202ENST00000420239 VPS9D1Q9Y2B5 631 aa6.88□□□□□ -1.31
CHD2-202ENST00000420239 SHTN1A0MZ66 631 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 GOLIM4O00461 696 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 CHUKO15111 745 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 TEX33O43247 280 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 KCNQ3O43525 872 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 GCFC2P16383 781 aaKnown RBP6.87□□□□□ -1.31
CHD2-202ENST00000420239 PIP4K2BP78356 416 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 SETQ01105 290 aaPredicted RBP6.87□□□□□ -1.31
CHD2-202ENST00000420239 KIF23Q02241 960 aaPredicted RBP6.87□□□□□ -1.31
CHD2-202ENST00000420239 RBL2Q08999 1139 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 NR1I3Q14994 352 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 PTPAQ15257 358 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 TNNI3KQ59H18 835 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 ZMYM1Q5SVZ6 1142 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 APTXQ7Z2E3 356 aaKnown RBP6.87□□□□□ -1.31
CHD2-202ENST00000420239 JMYQ8N9B5 988 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 C8orf76Q96K31 380 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 SH3GL2Q99962 352 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 SELENOOQ9BVL4 669 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.87□□□□□ -1.31
CHD2-202ENST00000420239 SLAIN2Q9P270 581 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 MAP10Q9P2G4 905 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 FKBPLQ9UIM3 349 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 MAN1B1Q9UKM7 699 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 MYO6Q9UM54 1294 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 NFE2L3Q9Y4A8 694 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 PCDHA5Q9Y5H7 936 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 FPGT-TNNI3KV9GXZ4 949 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 WDR19Q8NEZ3 1342 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 KDM6AO15550 1401 aaPredicted RBP6.87□□□□□ -1.31
CHD2-202ENST00000420239 LTN1O94822 1766 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 ECM29Q5VYK3 1845 aa6.87□□□□□ -1.31
CHD2-202ENST00000420239 A0A1B0GTH6 734 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 SNPHO15079 494 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 MFAP3LO75121 409 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 F12P00748 615 aaPredicted RBP6.86□□□□□ -1.31
CHD2-202ENST00000420239 ANXA1P04083 346 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 SKIP12755 728 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 PBX1P40424 430 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 SARSP49591 514 aaKnown RBP6.86□□□□□ -1.31
CHD2-202ENST00000420239 ACTN3Q08043 901 aaPredicted RBP6.86□□□□□ -1.31
CHD2-202ENST00000420239 ZNF827Q17R98 1081 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 CWF19L2Q2TBE0 894 aaKnown RBP6.86□□□□□ -1.31
CHD2-202ENST00000420239 LONRF3Q496Y0 759 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 CRTC2Q53ET0 693 aaPredicted RBP6.86□□□□□ -1.31
CHD2-202ENST00000420239 SYNE3Q6ZMZ3 975 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 TRAPPC11Q7Z392 1133 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 TEX11Q8IYF3 940 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 TRIML1Q8N9V2 468 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 CCDC148Q8NFR7 591 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 MMS19Q96T76 1030 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 VEZTQ9HBM0 779 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 LGR6Q9HBX8 967 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 SAMSN1Q9NSI8 373 aaKnown RBP6.86□□□□□ -1.31
CHD2-202ENST00000420239 MYO1AQ9UBC5 1043 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 PARP4Q9UKK3 1724 aaKnown RBP6.86□□□□□ -1.31
CHD2-202ENST00000420239 TMEM2Q9UHN6 1383 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 WDR17Q8IZU2 1322 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 ACTN4O43707 911 aaKnown RBP6.86□□□□□ -1.31
CHD2-202ENST00000420239 RTN2O75298 545 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 RASSF9O75901 435 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 NEBLO76041 1014 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 A1BGP04217 495 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 IGKV5-2P06315 115 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 MRPL12P52815 198 aaKnown RBP6.86□□□□□ -1.31
CHD2-202ENST00000420239 ERVK-24P63145 666 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 PDCLQ13371 301 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 SF3B2Q13435 895 aaKnown RBP6.86□□□□□ -1.31
CHD2-202ENST00000420239 BIRC2Q13490 618 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 NBPF20Q3BBV1 942 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 RABL6Q3YEC7 729 aaPredicted RBP6.86□□□□□ -1.31
CHD2-202ENST00000420239 AKAP4Q5JQC9 854 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 MAMSTRQ6ZN01 415 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 CHST3Q7LGC8 479 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 IQCA1Q86XH1 822 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 MLKLQ8NB16 471 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 CCDC51Q96ER9 411 aa6.86□□□□□ -1.31
CHD2-202ENST00000420239 ZFRQ96KR1 1074 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms