RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CCDC144CPQ8IYA2 1237 aa16.53■□□□□ 0.24
SHMT1P1-201ENST00000419974 LPAR1Q92633 364 aa16.53■□□□□ 0.24
SHMT1P1-201ENST00000419974 MTMR8Q96EF0 704 aa16.53■□□□□ 0.24
SHMT1P1-201ENST00000419974 KIAA1683Q9H0B3 1180 aa16.53■□□□□ 0.24
SHMT1P1-201ENST00000419974 ATP6V1DQ9Y5K8 247 aa16.53■□□□□ 0.24
SHMT1P1-201ENST00000419974 KLRF2D3W0D1 207 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 hCG_1984214I3L0E3 225 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 PLEKHA8P1O95397 391 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 NF2P35240 595 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 MAP2K2P36507 400 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 PKP1Q13835 747 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 PKN1Q16512 942 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 PFKFB3Q16875 520 aaPredicted RBP16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 SHROOM1Q2M3G4 852 aaPredicted RBP16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 TEX2Q8IWB9 1127 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 STAG2Q8N3U4 1231 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 ZNF713Q8N859 430 aaPredicted RBP16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 DDX11Q96FC9 970 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 ZSCAN16Q9H4T2 348 aaPredicted RBP16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 VCPKMTQ9H867 229 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 GOPCQ9HD26 462 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 SH3GLB2Q9NR46 395 aa16.52■□□□□ 0.24
SHMT1P1-201ENST00000419974 POLR2AP24928 1970 aaKnown RBP16.52■□□□□ 0.23
SHMT1P1-201ENST00000419974 PTPRAP18433 802 aa16.51■□□□□ 0.23
SHMT1P1-201ENST00000419974 AKAP17AQ02040 695 aaKnown RBP16.51■□□□□ 0.23
SHMT1P1-201ENST00000419974 COL13A1Q5TAT6 717 aaPredicted RBP16.51■□□□□ 0.23
SHMT1P1-201ENST00000419974 SLFN13Q68D06 897 aa16.51■□□□□ 0.23
SHMT1P1-201ENST00000419974 USP17L2Q6R6M4 530 aa16.51■□□□□ 0.23
SHMT1P1-201ENST00000419974 LRRC47Q8N1G4 583 aaKnown RBP16.51■□□□□ 0.23
SHMT1P1-201ENST00000419974 PHKBQ93100 1093 aa16.51■□□□□ 0.23
SHMT1P1-201ENST00000419974 CDCA5Q96FF9 252 aa16.51■□□□□ 0.23
SHMT1P1-201ENST00000419974 CAPNS2Q96L46 248 aa16.51■□□□□ 0.23
SHMT1P1-201ENST00000419974 WRNIP1Q96S55 665 aa16.51■□□□□ 0.23
SHMT1P1-201ENST00000419974 SLC26A6Q9BXS9 759 aa16.51■□□□□ 0.23
SHMT1P1-201ENST00000419974 AS3MTQ9HBK9 375 aa16.51■□□□□ 0.23
SHMT1P1-201ENST00000419974 SCAF8Q9UPN6 1271 aaKnown RBP16.51■□□□□ 0.23
SHMT1P1-201ENST00000419974 ADM5C9JUS6 153 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 CYTH3O43739 400 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 NDUFB10O96000 172 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 F13A1P00488 732 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 XBP1P17861 261 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 INPP5BP32019 993 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 USP14P54578 494 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 FKBP1BP68106 108 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 MAP3K9P80192 1104 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 CLEC10AQ8IUN9 316 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 TNPO1Q92973 898 aaKnown RBP16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 C8orf76Q96K31 380 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 C12orf42Q96LP6 360 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 ALG1Q9BT22 464 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 PICK1Q9NRD5 415 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 V9GY48 417 aaPredicted RBP16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 PAPPA2Q9BXP8 1791 aa16.5■□□□□ 0.23
SHMT1P1-201ENST00000419974 C19orf81C9J6K1 198 aa16.49■□□□□ 0.23
SHMT1P1-201ENST00000419974 SLC1A4P43007 532 aa16.49■□□□□ 0.23
SHMT1P1-201ENST00000419974 IREB2P48200 963 aaKnown RBP16.49■□□□□ 0.23
SHMT1P1-201ENST00000419974 SLC35G1Q2M3R5 365 aa16.49■□□□□ 0.23
SHMT1P1-201ENST00000419974 ATL3Q6DD88 541 aa16.49■□□□□ 0.23
SHMT1P1-201ENST00000419974 GALNT17Q6IS24 598 aa16.49■□□□□ 0.23
SHMT1P1-201ENST00000419974 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.49■□□□□ 0.23
SHMT1P1-201ENST00000419974 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
SHMT1P1-201ENST00000419974 USP17L10C9JJH3 530 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 H3BQV1 296 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 FOXN1O15353 648 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 BMP3P12645 472 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 SCG2P13521 617 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 CTCFP49711 727 aaPredicted RBP16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 SH3D19Q5HYK7 790 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 PRAMEF18Q5VWM3 479 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 CYP4F22Q6NT55 531 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 ANKRD13AQ8IZ07 590 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 C2orf69Q8N8R5 385 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 ZNF280CQ8ND82 737 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 PRDM10Q9NQV6 1147 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 THSD7BQ9C0I4 1608 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 DOCK1Q14185 1865 aa16.48■□□□□ 0.23
SHMT1P1-201ENST00000419974 WDR46O15213 610 aaKnown RBP16.47■□□□□ 0.23
SHMT1P1-201ENST00000419974 U2AF2P26368 475 aaKnown RBP eCLIP16.47■□□□□ 0.23
SHMT1P1-201ENST00000419974 BACE1P56817 501 aa16.47■□□□□ 0.23
SHMT1P1-201ENST00000419974 TRIM29Q14134 588 aa16.47■□□□□ 0.23
SHMT1P1-201ENST00000419974 LDLRAD1Q5T700 205 aa16.47■□□□□ 0.23
SHMT1P1-201ENST00000419974 BRAPQ7Z569 592 aa16.47■□□□□ 0.23
SHMT1P1-201ENST00000419974 RRP36Q96EU6 259 aaKnown RBP16.47■□□□□ 0.23
SHMT1P1-201ENST00000419974 GBP4Q96PP9 640 aa16.47■□□□□ 0.23
SHMT1P1-201ENST00000419974 PHF20Q9BVI0 1012 aa16.47■□□□□ 0.23
SHMT1P1-201ENST00000419974 ZNF408Q9H9D4 720 aa16.47■□□□□ 0.23
SHMT1P1-201ENST00000419974 GBA2Q9HCG7 927 aaPredicted RBP16.47■□□□□ 0.23
SHMT1P1-201ENST00000419974 BARHL2Q9NY43 387 aa16.47■□□□□ 0.23
SHMT1P1-201ENST00000419974 AFG3L2Q9Y4W6 797 aa16.47■□□□□ 0.23
SHMT1P1-201ENST00000419974 PNMA6FA0A0J9YX94 578 aa16.46■□□□□ 0.23
SHMT1P1-201ENST00000419974 ESYT2A0FGR8 921 aa16.46■□□□□ 0.23
SHMT1P1-201ENST00000419974 MMP1P03956 469 aa16.46■□□□□ 0.23
SHMT1P1-201ENST00000419974 ATP2B2Q01814 1243 aa16.46■□□□□ 0.23
SHMT1P1-201ENST00000419974 PPATQ06203 517 aa16.46■□□□□ 0.23
SHMT1P1-201ENST00000419974 RESTQ13127 1097 aa16.46■□□□□ 0.23
SHMT1P1-201ENST00000419974 KRT40Q6A162 431 aa16.46■□□□□ 0.23
SHMT1P1-201ENST00000419974 PAXIP1Q6ZW49 1069 aaPredicted RBP16.46■□□□□ 0.23
SHMT1P1-201ENST00000419974 ARMC9Q7Z3E5 817 aa16.46■□□□□ 0.23
SHMT1P1-201ENST00000419974 FAM160B2Q86V87 743 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms