RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 MORN1Q5T089 497 aa24.08■■□□□ 1.45
GTF3A-202ENST00000419181 NUP88Q99567 741 aaPredicted RBP24.08■■□□□ 1.45
GTF3A-202ENST00000419181 SPATC1LQ9H0A9 340 aa24.08■■□□□ 1.45
GTF3A-202ENST00000419181 XRCC5P13010 732 aaKnown RBP24.07■■□□□ 1.44
GTF3A-202ENST00000419181 CCL5P13501 91 aa24.07■■□□□ 1.44
GTF3A-202ENST00000419181 HAND2P61296 217 aa24.07■■□□□ 1.44
GTF3A-202ENST00000419181 LRRC47Q8N1G4 583 aaKnown RBP24.07■■□□□ 1.44
GTF3A-202ENST00000419181 GMCL1P1Q8NEA9 526 aa24.07■■□□□ 1.44
GTF3A-202ENST00000419181 DSCC1Q9BVC3 393 aa24.07■■□□□ 1.44
GTF3A-202ENST00000419181 MOV10L1Q9BXT6 1211 aaKnown RBP24.07■■□□□ 1.44
GTF3A-202ENST00000419181 IL25Q9H293 177 aa24.07■■□□□ 1.44
GTF3A-202ENST00000419181 IL17RBQ9NRM6 502 aa24.07■■□□□ 1.44
GTF3A-202ENST00000419181 PPP1R9AQ9ULJ8 1098 aa24.07■■□□□ 1.44
GTF3A-202ENST00000419181 PDE4DIPQ5VU43 2346 aa24.07■■□□□ 1.44
GTF3A-202ENST00000419181 MKI67P46013 3256 aaKnown RBP24.06■■□□□ 1.44
GTF3A-202ENST00000419181 RANBP6O60518 1105 aaKnown RBP24.06■■□□□ 1.44
GTF3A-202ENST00000419181 HMGCRP04035 888 aa24.06■■□□□ 1.44
GTF3A-202ENST00000419181 PPP4R3BQ5MIZ7 849 aa24.06■■□□□ 1.44
GTF3A-202ENST00000419181 CWC22Q9HCG8 908 aaKnown RBP24.06■■□□□ 1.44
GTF3A-202ENST00000419181 ZNF236Q9UL36 1845 aa24.05■■□□□ 1.44
GTF3A-202ENST00000419181 NMT2O60551 498 aa24.05■■□□□ 1.44
GTF3A-202ENST00000419181 PCP11498 1178 aaKnown RBP24.05■■□□□ 1.44
GTF3A-202ENST00000419181 CYP2B6P20813 491 aa24.05■■□□□ 1.44
GTF3A-202ENST00000419181 RGS2P41220 211 aa24.05■■□□□ 1.44
GTF3A-202ENST00000419181 WDR78Q5VTH9 848 aa24.05■■□□□ 1.44
GTF3A-202ENST00000419181 SAMD1Q6SPF0 538 aaPredicted RBP24.05■■□□□ 1.44
GTF3A-202ENST00000419181 CENPQQ7L2Z9 268 aaPredicted RBP24.05■■□□□ 1.44
GTF3A-202ENST00000419181 TBC1D10CQ8IV04 446 aa24.05■■□□□ 1.44
GTF3A-202ENST00000419181 SHCBP1Q8NEM2 672 aa24.05■■□□□ 1.44
GTF3A-202ENST00000419181 STAG1Q8WVM7 1258 aa24.05■■□□□ 1.44
GTF3A-202ENST00000419181 TRIB2Q92519 343 aa24.05■■□□□ 1.44
GTF3A-202ENST00000419181 RNF208Q9H0X6 261 aa24.05■■□□□ 1.44
GTF3A-202ENST00000419181 UNC93B1Q9H1C4 597 aa24.05■■□□□ 1.44
GTF3A-202ENST00000419181 RAD50Q92878 1312 aa24.05■■□□□ 1.44
GTF3A-202ENST00000419181 SLC15A5A6NIM6 579 aa24.04■■□□□ 1.44
GTF3A-202ENST00000419181 VWA5AO00534 786 aa24.04■■□□□ 1.44
GTF3A-202ENST00000419181 GJB1P08034 283 aa24.04■■□□□ 1.44
GTF3A-202ENST00000419181 PTPREP23469 700 aa24.04■■□□□ 1.44
GTF3A-202ENST00000419181 NOVP48745 357 aa24.04■■□□□ 1.44
GTF3A-202ENST00000419181 TMEM132BQ14DG7 1078 aa24.04■■□□□ 1.44
GTF3A-202ENST00000419181 AKNAD1Q5T1N1 836 aa24.04■■□□□ 1.44
GTF3A-202ENST00000419181 APBA2Q99767 749 aa24.04■■□□□ 1.44
GTF3A-202ENST00000419181 SLF1Q9BQI6 1058 aa24.04■■□□□ 1.44
GTF3A-202ENST00000419181 TOMM22Q9NS69 142 aa24.04■■□□□ 1.44
GTF3A-202ENST00000419181 STX8Q9UNK0 236 aa24.04■■□□□ 1.44
GTF3A-202ENST00000419181 IVNS1ABPQ9Y6Y0 642 aa24.04■■□□□ 1.44
GTF3A-202ENST00000419181 ERCC3P19447 782 aa24.03■■□□□ 1.44
GTF3A-202ENST00000419181 CHMLP26374 656 aa24.03■■□□□ 1.44
GTF3A-202ENST00000419181 MAP2K5Q13163 448 aa24.03■■□□□ 1.44
GTF3A-202ENST00000419181 GRB14Q14449 540 aa24.03■■□□□ 1.44
GTF3A-202ENST00000419181 PLS1Q14651 629 aa24.03■■□□□ 1.44
GTF3A-202ENST00000419181 RRP12Q5JTH9 1297 aaKnown RBP24.03■■□□□ 1.44
GTF3A-202ENST00000419181 MFSD6Q6ZSS7 791 aa24.03■■□□□ 1.44
GTF3A-202ENST00000419181 REPS2Q8NFH8 660 aa24.03■■□□□ 1.44
GTF3A-202ENST00000419181 ZNF213O14771 459 aa24.02■■□□□ 1.44
GTF3A-202ENST00000419181 SLFN13Q68D06 897 aa24.02■■□□□ 1.44
GTF3A-202ENST00000419181 TRMT44Q8IYL2 757 aaKnown RBP24.02■■□□□ 1.44
GTF3A-202ENST00000419181 SHISA4Q96DD7 197 aa24.02■■□□□ 1.44
GTF3A-202ENST00000419181 RNF41Q9H4P4 317 aaPredicted RBP24.02■■□□□ 1.44
GTF3A-202ENST00000419181 ZNF214Q9UL59 606 aaPredicted RBP24.02■■□□□ 1.44
GTF3A-202ENST00000419181 GJA8P48165 433 aa24.01■■□□□ 1.43
GTF3A-202ENST00000419181 TRIM32Q13049 653 aa24.01■■□□□ 1.43
GTF3A-202ENST00000419181 PRPF38AQ8NAV1 312 aaKnown RBP24.01■■□□□ 1.43
GTF3A-202ENST00000419181 NKX2-3Q8TAU0 364 aa24.01■■□□□ 1.43
GTF3A-202ENST00000419181 GMCL1Q96IK5 515 aa24.01■■□□□ 1.43
GTF3A-202ENST00000419181 MROH8Q9H579 483 aa24.01■■□□□ 1.43
GTF3A-202ENST00000419181 PAK6Q9NQU5 681 aaPredicted RBP24.01■■□□□ 1.43
GTF3A-202ENST00000419181 TCP11L1Q9NUJ3 509 aa24.01■■□□□ 1.43
GTF3A-202ENST00000419181 NEDD4P46934 1319 aa24.01■■□□□ 1.43
GTF3A-202ENST00000419181 STRNO43815 780 aa24■■□□□ 1.43
GTF3A-202ENST00000419181 HOXC6P09630 235 aa24■■□□□ 1.43
GTF3A-202ENST00000419181 BMP3P12645 472 aa24■■□□□ 1.43
GTF3A-202ENST00000419181 ZKSCAN1P17029 563 aaPredicted RBP24■■□□□ 1.43
GTF3A-202ENST00000419181 CCL14Q16627 93 aa24■■□□□ 1.43
GTF3A-202ENST00000419181 RIOX2Q8IUF8 465 aa24■■□□□ 1.43
GTF3A-202ENST00000419181 RUFY2Q8WXA3 655 aa24■■□□□ 1.43
GTF3A-202ENST00000419181 CTNNA3Q9UI47 895 aa24■■□□□ 1.43
GTF3A-202ENST00000419181 FEM1BQ9UK73 627 aa24■■□□□ 1.43
GTF3A-202ENST00000419181 SLC25A27O95847 323 aa23.99■■□□□ 1.43
GTF3A-202ENST00000419181 MAP3K21Q5TCX8 1036 aa23.99■■□□□ 1.43
GTF3A-202ENST00000419181 NCAPG2Q86XI2 1143 aa23.99■■□□□ 1.43
GTF3A-202ENST00000419181 U2AF1L4Q8WU68 220 aaKnown RBP23.99■■□□□ 1.43
GTF3A-202ENST00000419181 ADORA2AP29274 412 aa23.98■■□□□ 1.43
GTF3A-202ENST00000419181 STAT3P40763 770 aa23.98■■□□□ 1.43
GTF3A-202ENST00000419181 SLC1A4P43007 532 aa23.98■■□□□ 1.43
GTF3A-202ENST00000419181 NT5C2P49902 561 aa23.98■■□□□ 1.43
GTF3A-202ENST00000419181 IMMTQ16891 758 aaKnown RBP23.98■■□□□ 1.43
GTF3A-202ENST00000419181 PRPF38BQ5VTL8 546 aaKnown RBP23.98■■□□□ 1.43
GTF3A-202ENST00000419181 ABRAQ8N0Z2 381 aa23.98■■□□□ 1.43
GTF3A-202ENST00000419181 ESR2Q92731 530 aa23.98■■□□□ 1.43
GTF3A-202ENST00000419181 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.98■■□□□ 1.43
GTF3A-202ENST00000419181 RPTORQ8N122 1335 aa23.98■■□□□ 1.43
GTF3A-202ENST00000419181 SGPL1O95470 568 aa23.97■■□□□ 1.43
GTF3A-202ENST00000419181 MCCP23508 829 aa23.97■■□□□ 1.43
GTF3A-202ENST00000419181 KIFC2Q96AC6 838 aa23.97■■□□□ 1.43
GTF3A-202ENST00000419181 DEFB118Q96PH6 123 aa23.97■■□□□ 1.43
GTF3A-202ENST00000419181 TEX13BQ9BXU2 312 aa23.97■■□□□ 1.43
GTF3A-202ENST00000419181 HMX1Q9NP08 348 aaPredicted RBP23.97■■□□□ 1.43
GTF3A-202ENST00000419181 ZNFX1Q9P2E3 1918 aaKnown RBP23.96■■□□□ 1.43
GTF3A-202ENST00000419181 TMEM232C9JQI7 657 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms