RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 TTC38Q5R3I4 469 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 WWC2Q6AWC2 1192 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 TYW1BQ6NUM6 668 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 KRBA2Q6ZNG9 492 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 LUZP1Q86V48 1076 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 RTKN2Q8IZC4 609 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 BLIDQ8IZY5 108 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 TTLL6Q8N841 843 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 GMLQ99445 158 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 DNAJC18Q9H819 358 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 FAM198AQ9UFP1 575 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 KCNH3Q9ULD8 1083 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 STX8Q9UNK0 236 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 ZKSCAN5Q9Y2L8 839 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 ATAD5Q96QE3 1844 aa10.37□□□□□ -0.75
LINCMD1-201ENST00000418518 WNT7AO00755 349 aa10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 PPIP5K2O43314 1243 aa10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 ENTPD3O75355 529 aa10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 TTLL1O95922 423 aa10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 MDM2Q00987 491 aaPredicted RBP10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 GRIN1Q05586 938 aa10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 NT5DC1Q5TFE4 455 aa10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 ARL6IP4Q66PJ3 421 aaKnown RBP10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 PLA2G4DQ86XP0 818 aa10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 KIAA0825Q8IV33 1275 aa10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 DHX40Q8IX18 779 aaKnown RBP10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 CCDC12Q8WUD4 166 aaPredicted RBP10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 ZMYND12Q9H0C1 365 aa10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 FAM13BQ9NYF5 915 aa10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.36□□□□□ -0.75
LINCMD1-201ENST00000418518 ACTN4O43707 911 aaKnown RBP10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 ZNF500O60304 480 aaPredicted RBP10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 VIL1P09327 827 aaKnown RBP10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 ZNF543Q08ER8 600 aa10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 ORC2Q13416 577 aaPredicted RBP10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 NOM1Q5C9Z4 860 aaKnown RBP10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 SOGA3Q5TF21 947 aa10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 PPP1R18Q6NYC8 613 aa10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 TATDN1Q6P1N9 297 aa10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 SH3BP5LQ7L8J4 393 aa10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 DEFB132Q7Z7B7 95 aa10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 C4orf32Q8N8J7 132 aa10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 SPATA20Q8TB22 786 aa10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 GPKOWQ92917 476 aaPredicted RBP eCLIP10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 MKL1Q969V6 931 aa10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 MTMR8Q96EF0 704 aa10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 PDGFDQ9GZP0 370 aaPredicted RBP10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 NAT10Q9H0A0 1025 aaKnown RBP10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 NYAP2Q9P242 653 aa10.35□□□□□ -0.75
LINCMD1-201ENST00000418518 USP17L5A8MUK1 530 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 IKBKBO14920 756 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 ADAMTS3O15072 1205 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 C21orf2O43822 256 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 TPM3P06753 285 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 DPEP1P16444 411 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 ZNF75DP51815 510 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 DPCR1Q3MIW9 517 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 LONRF3Q496Y0 759 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 GPATCH4Q5T3I0 446 aaKnown RBP10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 KANK3Q6NY19 840 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 RSBN1LQ6PCB5 846 aaPredicted RBP10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 USP17L2Q6R6M4 530 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 PIK3AP1Q6ZUJ8 805 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 RASGRP2Q7LDG7 609 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 SH3RF1Q7Z6J0 888 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 CCDC125Q86Z20 511 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 FOXP4Q8IVH2 680 aaPredicted RBP10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 ZFPM1Q8IX07 1006 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 MTMR14Q8NCE2 650 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 RRP36Q96EU6 259 aaKnown RBP10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 PYM1Q9BRP8 204 aaKnown RBP10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 CSRNP2Q9H175 543 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 PI4KBQ9UBF8 816 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 HOOK1Q9UJC3 728 aaKnown RBP10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 SYNPO2Q9UMS6 1093 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 PCDHA6Q9UN73 950 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 PCDHA8Q9Y5H6 950 aa10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 DICER1Q9UPY3 1922 aaKnown RBP10.34□□□□□ -0.75
LINCMD1-201ENST00000418518 DDTLA6NHG4 134 aaPredicted RBP10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 LAD1O00515 517 aa10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 MYO1BO43795 1136 aa10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 GNA11P29992 359 aa10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 SARSP49591 514 aaKnown RBP10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 TGFB2P61812 414 aa10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 PTGDRQ13258 359 aa10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 CFAP100Q494V2 611 aa10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 FKBP1CQ5VVH2 108 aa10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 KRT25Q7Z3Z0 450 aa10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 HEATR3Q7Z4Q2 680 aa10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 TRIML1Q8N9V2 468 aa10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 CNNM3Q8NE01 707 aa10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 MRFAP1L1Q96HT8 127 aa10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 ZNF219Q9P2Y4 722 aaPredicted RBP10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 SEC63Q9UGP8 760 aaKnown RBP10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 PCDHAC2Q9Y5I4 1007 aa10.33□□□□□ -0.76
LINCMD1-201ENST00000418518 SPDYE2BA6NHP3 402 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 GOLGA6L19H0YKK7 550 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 POLR2DO15514 142 aaKnown RBP10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 SLFN14P0C7P3 912 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms