RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TSPY3P0CV98 308 aa24.48■■□□□ 1.51
PKNOX1-202ENST00000418336 TSPY8P0CW00 308 aa24.48■■□□□ 1.51
PKNOX1-202ENST00000418336 PLEKHH3Q7Z736 793 aa24.48■■□□□ 1.51
PKNOX1-202ENST00000418336 TRIB2Q92519 343 aa24.48■■□□□ 1.51
PKNOX1-202ENST00000418336 PPP1R9AQ9ULJ8 1098 aa24.48■■□□□ 1.51
PKNOX1-202ENST00000418336 MYCP01106 439 aaPredicted RBP24.47■■□□□ 1.51
PKNOX1-202ENST00000418336 INHAP05111 366 aa24.47■■□□□ 1.51
PKNOX1-202ENST00000418336 XRCC5P13010 732 aaKnown RBP24.47■■□□□ 1.51
PKNOX1-202ENST00000418336 CHMLP26374 656 aa24.47■■□□□ 1.51
PKNOX1-202ENST00000418336 HAND2P61296 217 aa24.47■■□□□ 1.51
PKNOX1-202ENST00000418336 TRIM32Q13049 653 aa24.47■■□□□ 1.51
PKNOX1-202ENST00000418336 TMEM132BQ14DG7 1078 aa24.47■■□□□ 1.51
PKNOX1-202ENST00000418336 LRRC47Q8N1G4 583 aaKnown RBP24.47■■□□□ 1.51
PKNOX1-202ENST00000418336 MB21D1Q8N884 522 aa24.47■■□□□ 1.51
PKNOX1-202ENST00000418336 STAG1Q8WVM7 1258 aa24.47■■□□□ 1.51
PKNOX1-202ENST00000418336 DSCC1Q9BVC3 393 aa24.47■■□□□ 1.51
PKNOX1-202ENST00000418336 SPATC1LQ9H0A9 340 aa24.47■■□□□ 1.51
PKNOX1-202ENST00000418336 UNC93B1Q9H1C4 597 aa24.47■■□□□ 1.51
PKNOX1-202ENST00000418336 CCL5P13501 91 aa24.46■■□□□ 1.51
PKNOX1-202ENST00000418336 GRB14Q14449 540 aa24.46■■□□□ 1.51
PKNOX1-202ENST00000418336 SOCS4Q8WXH5 440 aa24.46■■□□□ 1.51
PKNOX1-202ENST00000418336 ZNF214Q9UL59 606 aaPredicted RBP24.46■■□□□ 1.51
PKNOX1-202ENST00000418336 VWA5AO00534 786 aa24.45■■□□□ 1.5
PKNOX1-202ENST00000418336 PTPREP23469 700 aa24.45■■□□□ 1.5
PKNOX1-202ENST00000418336 MFAP1P55081 439 aaKnown RBP24.45■■□□□ 1.5
PKNOX1-202ENST00000418336 MAP3K21Q5TCX8 1036 aa24.45■■□□□ 1.5
PKNOX1-202ENST00000418336 SHCBP1Q8NEM2 672 aa24.45■■□□□ 1.5
PKNOX1-202ENST00000418336 NUDT12Q9BQG2 462 aa24.45■■□□□ 1.5
PKNOX1-202ENST00000418336 NEDD4P46934 1319 aa24.44■■□□□ 1.5
PKNOX1-202ENST00000418336 CCNA1P78396 465 aa24.44■■□□□ 1.5
PKNOX1-202ENST00000418336 AKNAD1Q5T1N1 836 aa24.44■■□□□ 1.5
PKNOX1-202ENST00000418336 CENPQQ7L2Z9 268 aaPredicted RBP24.44■■□□□ 1.5
PKNOX1-202ENST00000418336 RASGRP2Q7LDG7 609 aa24.44■■□□□ 1.5
PKNOX1-202ENST00000418336 PAK6Q9NQU5 681 aaPredicted RBP24.44■■□□□ 1.5
PKNOX1-202ENST00000418336 TCP11L1Q9NUJ3 509 aa24.44■■□□□ 1.5
PKNOX1-202ENST00000418336 TSPY2A6NKD2 308 aa24.43■■□□□ 1.5
PKNOX1-202ENST00000418336 HOXC6P09630 235 aa24.43■■□□□ 1.5
PKNOX1-202ENST00000418336 CYP2B6P20813 491 aa24.43■■□□□ 1.5
PKNOX1-202ENST00000418336 CCL14Q16627 93 aa24.43■■□□□ 1.5
PKNOX1-202ENST00000418336 UBE2Q1Q7Z7E8 422 aa24.43■■□□□ 1.5
PKNOX1-202ENST00000418336 GMCL1Q96IK5 515 aa24.43■■□□□ 1.5
PKNOX1-202ENST00000418336 TMEM106CQ9BVX2 250 aa24.43■■□□□ 1.5
PKNOX1-202ENST00000418336 FLRT1Q9NZU1 646 aa24.43■■□□□ 1.5
PKNOX1-202ENST00000418336 RAD50Q92878 1312 aa24.42■■□□□ 1.5
PKNOX1-202ENST00000418336 SLC15A5A6NIM6 579 aa24.42■■□□□ 1.5
PKNOX1-202ENST00000418336 HMGCRP04035 888 aa24.42■■□□□ 1.5
PKNOX1-202ENST00000418336 GJB1P08034 283 aa24.42■■□□□ 1.5
PKNOX1-202ENST00000418336 ERCC3P19447 782 aa24.42■■□□□ 1.5
PKNOX1-202ENST00000418336 GJA8P48165 433 aa24.42■■□□□ 1.5
PKNOX1-202ENST00000418336 UBXN2AP68543 259 aa24.42■■□□□ 1.5
PKNOX1-202ENST00000418336 MAP2K5Q13163 448 aa24.42■■□□□ 1.5
PKNOX1-202ENST00000418336 RCSD1Q6JBY9 416 aa24.42■■□□□ 1.5
PKNOX1-202ENST00000418336 SLF1Q9BQI6 1058 aa24.42■■□□□ 1.5
PKNOX1-202ENST00000418336 RANBP6O60518 1105 aaKnown RBP24.41■■□□□ 1.5
PKNOX1-202ENST00000418336 PCP11498 1178 aaKnown RBP24.41■■□□□ 1.5
PKNOX1-202ENST00000418336 SLFN13Q68D06 897 aa24.41■■□□□ 1.5
PKNOX1-202ENST00000418336 NPLOC4Q8TAT6 608 aa24.41■■□□□ 1.5
PKNOX1-202ENST00000418336 APBA2Q99767 749 aa24.41■■□□□ 1.5
PKNOX1-202ENST00000418336 RNF208Q9H0X6 261 aa24.41■■□□□ 1.5
PKNOX1-202ENST00000418336 PDE4DIPQ5VU43 2346 aa24.4■■□□□ 1.5
PKNOX1-202ENST00000418336 RGS2P41220 211 aa24.4■■□□□ 1.5
PKNOX1-202ENST00000418336 SGSM2O43147 1006 aa24.39■■□□□ 1.49
PKNOX1-202ENST00000418336 RAD21O60216 631 aa24.39■■□□□ 1.49
PKNOX1-202ENST00000418336 PTH1RQ03431 593 aa24.39■■□□□ 1.49
PKNOX1-202ENST00000418336 RIOX2Q8IUF8 465 aa24.39■■□□□ 1.49
PKNOX1-202ENST00000418336 CRISPLD2Q9H0B8 497 aa24.39■■□□□ 1.49
PKNOX1-202ENST00000418336 BIN2Q9UBW5 565 aaPredicted RBP24.39■■□□□ 1.49
PKNOX1-202ENST00000418336 STX8Q9UNK0 236 aa24.39■■□□□ 1.49
PKNOX1-202ENST00000418336 ZNF213O14771 459 aa24.38■■□□□ 1.49
PKNOX1-202ENST00000418336 ATP2A1O14983 1001 aa24.38■■□□□ 1.49
PKNOX1-202ENST00000418336 COBLO75128 1261 aa24.38■■□□□ 1.49
PKNOX1-202ENST00000418336 MFSD6Q6ZSS7 791 aa24.38■■□□□ 1.49
PKNOX1-202ENST00000418336 PRPF38AQ8NAV1 312 aaKnown RBP24.38■■□□□ 1.49
PKNOX1-202ENST00000418336 U2AF1L4Q8WU68 220 aaKnown RBP24.38■■□□□ 1.49
PKNOX1-202ENST00000418336 TMEM47Q9BQJ4 181 aa24.38■■□□□ 1.49
PKNOX1-202ENST00000418336 MROH8Q9H579 483 aa24.38■■□□□ 1.49
PKNOX1-202ENST00000418336 SLC38A10Q9HBR0 1119 aa24.38■■□□□ 1.49
PKNOX1-202ENST00000418336 FEM1BQ9UK73 627 aa24.38■■□□□ 1.49
PKNOX1-202ENST00000418336 SGPL1O95470 568 aa24.37■■□□□ 1.49
PKNOX1-202ENST00000418336 BMP3P12645 472 aa24.37■■□□□ 1.49
PKNOX1-202ENST00000418336 ADORA2AP29274 412 aa24.37■■□□□ 1.49
PKNOX1-202ENST00000418336 CACNB2Q08289 660 aaPredicted RBP24.37■■□□□ 1.49
PKNOX1-202ENST00000418336 RRP12Q5JTH9 1297 aaKnown RBP24.37■■□□□ 1.49
PKNOX1-202ENST00000418336 PPP4R3BQ5MIZ7 849 aa24.37■■□□□ 1.49
PKNOX1-202ENST00000418336 ABRAQ8N0Z2 381 aa24.37■■□□□ 1.49
PKNOX1-202ENST00000418336 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.37■■□□□ 1.495e-9■■■■■ 54.8
PKNOX1-202ENST00000418336 RIPK3Q9Y572 518 aa24.37■■□□□ 1.49
PKNOX1-202ENST00000418336 TAF6LQ9Y6J9 622 aa24.37■■□□□ 1.49
PKNOX1-202ENST00000418336 ZNFX1Q9P2E3 1918 aaKnown RBP24.36■■□□□ 1.49
PKNOX1-202ENST00000418336 STRNO43815 780 aa24.36■■□□□ 1.49
PKNOX1-202ENST00000418336 PLA2G6O60733 806 aa24.36■■□□□ 1.49
PKNOX1-202ENST00000418336 MCCP23508 829 aa24.36■■□□□ 1.49
PKNOX1-202ENST00000418336 STAT3P40763 770 aa24.36■■□□□ 1.49
PKNOX1-202ENST00000418336 SAMD1Q6SPF0 538 aaPredicted RBP24.36■■□□□ 1.49
PKNOX1-202ENST00000418336 RNF41Q9H4P4 317 aaPredicted RBP24.36■■□□□ 1.49
PKNOX1-202ENST00000418336 ZNF536O15090 1300 aa24.35■■□□□ 1.49
PKNOX1-202ENST00000418336 RPTORQ8N122 1335 aa24.35■■□□□ 1.49
PKNOX1-202ENST00000418336 SLC25A27O95847 323 aa24.35■■□□□ 1.49
PKNOX1-202ENST00000418336 PLS1Q14651 629 aa24.35■■□□□ 1.49
PKNOX1-202ENST00000418336 WDR78Q5VTH9 848 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms