RNA–Protein interactions for RNA: ENST00000418217.1

GTF2B-202, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-202ENST00000418217 PHF20L1A8MW92 1017 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 AOC2O75106 756 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 GADD45BO75293 160 aaPredicted RBP7.56□□□□□ -1.2
GTF2B-202ENST00000418217 HMGB1P09429 215 aaKnown RBP7.56□□□□□ -1.2
GTF2B-202ENST00000418217 FGFR2P21802 821 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 MCM5P33992 734 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 SRSF11Q05519 484 aaKnown RBP7.56□□□□□ -1.2
GTF2B-202ENST00000418217 ZMYM1Q5SVZ6 1142 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 GORABQ5T7V8 394 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 FOXD4L5Q5VV16 416 aaPredicted RBP7.56□□□□□ -1.2
GTF2B-202ENST00000418217 CIAPIN1Q6FI81 312 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 CTU1Q7Z7A3 348 aaKnown RBP7.56□□□□□ -1.2
GTF2B-202ENST00000418217 GPC2Q8N158 579 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 FBXL16Q8N461 479 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 FOXD4L4Q8WXT5 416 aaPredicted RBP7.56□□□□□ -1.2
GTF2B-202ENST00000418217 GTF3C6Q969F1 213 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 NEUROD6Q96NK8 337 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 CD209Q9NNX6 404 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 ENAMQ9NRM1 1142 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 GNL3LQ9NVN8 582 aaKnown RBP7.56□□□□□ -1.2
GTF2B-202ENST00000418217 CNPY2Q9Y2B0 182 aa7.56□□□□□ -1.2
GTF2B-202ENST00000418217 COL4A1P02462 1669 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 A0A1B0GUL7 405 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 USP17L3A6NCW0 530 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 USP17L4A6NCW7 530 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 WTIPA6NIX2 430 aaPredicted RBP7.55□□□□□ -1.2
GTF2B-202ENST00000418217 SNAP23O00161 211 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 SPINT1O43278 529 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 ZNF500O60304 480 aaPredicted RBP7.55□□□□□ -1.2
GTF2B-202ENST00000418217 RAD17O75943 681 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 F12P00748 615 aaPredicted RBP7.55□□□□□ -1.2
GTF2B-202ENST00000418217 IL1R1P14778 569 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 KLRK1P26718 216 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 LMOD1P29536 600 aaPredicted RBP7.55□□□□□ -1.2
GTF2B-202ENST00000418217 STRIP1Q5VSL9 837 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 USP17L1Q7RTZ2 530 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 TXNRD3Q86VQ6 643 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 SMARCC2Q8TAQ2 1214 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 CCDC102AQ96A19 550 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 FAM84BQ96KN1 310 aaPredicted RBP7.55□□□□□ -1.2
GTF2B-202ENST00000418217 NEK1Q96PY6 1258 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 LLPHQ9BRT6 129 aaKnown RBP7.55□□□□□ -1.2
GTF2B-202ENST00000418217 FUCA2Q9BTY2 467 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 PAG1Q9NWQ8 432 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 HDAC9Q9UKV0 1011 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 NOL7Q9UMY1 257 aaKnown RBP7.55□□□□□ -1.2
GTF2B-202ENST00000418217 GJA3Q9Y6H8 435 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 TAF6LQ9Y6J9 622 aa7.55□□□□□ -1.2
GTF2B-202ENST00000418217 DUOX1Q9NRD9 1551 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 MYO3BQ8WXR4 1341 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 CCDC88AQ3V6T2 1871 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 YDJCA8MPS7 323 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 CYP21A2P08686 494 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 RPS12P25398 132 aaKnown RBP7.54□□□□□ -1.2
GTF2B-202ENST00000418217 GYG1P46976 350 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 TIMM10P62072 90 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 KRT85P78386 507 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 CXCL9Q07325 125 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 NOGQ13253 232 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 LRRFIP1Q32MZ4 808 aaKnown RBP7.54□□□□□ -1.2
GTF2B-202ENST00000418217 CCDC158Q5M9N0 1113 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 TTLL5Q6EMB2 1281 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 VASH1Q7L8A9 365 aaPredicted RBP7.54□□□□□ -1.2
GTF2B-202ENST00000418217 SH3RF1Q7Z6J0 888 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 FBXO33Q7Z6M2 555 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 CCDC116Q8IYX3 515 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 RGS22Q8NE09 1264 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 TDRD7Q8NHU6 1098 aaKnown RBP7.54□□□□□ -1.2
GTF2B-202ENST00000418217 CHMP4CQ96CF2 233 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 EDC3Q96F86 508 aaKnown RBP7.54□□□□□ -1.2
GTF2B-202ENST00000418217 XAGE2Q96GT9 111 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 GDPD2Q9HCC8 539 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 CCDC39Q9UFE4 941 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 LRRC37AA6NMS7 1700 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 SLX4Q8IY92 1834 aa7.54□□□□□ -1.2
GTF2B-202ENST00000418217 MAST3O60307 1309 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 ZNF541Q9H0D2 1346 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 SALL1Q9NSC2 1324 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 IRS2Q9Y4H2 1338 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 BRCA1P38398 1863 aaKnown RBP7.53□□□□□ -1.2
GTF2B-202ENST00000418217 PSMD14O00487 310 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 FIBPO43427 364 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 PFKFB2O60825 505 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 ZFYP08048 801 aaPredicted RBP7.53□□□□□ -1.2
GTF2B-202ENST00000418217 VIL1P09327 827 aaKnown RBP7.53□□□□□ -1.2
GTF2B-202ENST00000418217 UQCRFS1P1P0C7P4 283 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 MMP14P50281 582 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 TERF1P54274 439 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 EVCP57679 992 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 GTF2IP78347 998 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 EXOSC10Q01780 885 aaKnown RBP7.53□□□□□ -1.2
GTF2B-202ENST00000418217 DNM1Q05193 864 aaKnown RBP7.53□□□□□ -1.2
GTF2B-202ENST00000418217 CBLBQ13191 982 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 COL9A3Q14050 684 aaPredicted RBP7.53□□□□□ -1.2
GTF2B-202ENST00000418217 TTC39AQ5SRH9 613 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 LARP1BQ659C4 914 aaKnown RBP7.53□□□□□ -1.2
GTF2B-202ENST00000418217 CCDC102BQ68D86 513 aa7.53□□□□□ -1.2
GTF2B-202ENST00000418217 RSBN1LQ6PCB5 846 aaPredicted RBP7.53□□□□□ -1.2
GTF2B-202ENST00000418217 RBM43Q6ZSC3 357 aaKnown RBP7.53□□□□□ -1.2
GTF2B-202ENST00000418217 CDC37L1Q7L3B6 337 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms