RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MFAP1P55081 439 aaKnown RBP5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 ZNF124Q15973 351 aa5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 TSPYL5Q86VY4 417 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 SYTL4Q96C24 671 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 SLC38A3Q99624 504 aa5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 ASPNQ9BXN1 380 aa5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 GPR62Q9BZJ7 368 aa5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 ASCC2Q9H1I8 757 aaPredicted RBP5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 ADAMTS10Q9H324 1103 aa5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 C19orf73Q9NVV2 129 aa5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 FAM53CQ9NYF3 392 aa5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 GMIPQ9P107 970 aa5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 TMEM59LQ9UK28 342 aa5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 CEP170Q5SW79 1584 aa5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 KIAA0556O60303 1618 aa5.74□□□□□ -1.49
HMGB3P20-201ENST00000417997 ZNF503-AS2A6NEH8 195 aa5.74□□□□□ -1.49
HMGB3P20-201ENST00000417997 ZNF76P36508 570 aa5.74□□□□□ -1.49
HMGB3P20-201ENST00000417997 GAB4Q2WGN9 574 aa5.74□□□□□ -1.49
HMGB3P20-201ENST00000417997 OVOS1Q6IE37 1185 aa5.74□□□□□ -1.49
HMGB3P20-201ENST00000417997 ABHD4Q8TB40 342 aa5.74□□□□□ -1.49
HMGB3P20-201ENST00000417997 LRRC3Q9BY71 257 aa5.74□□□□□ -1.49
HMGB3P20-201ENST00000417997 KCNQ5Q9NR82 932 aa5.74□□□□□ -1.49
HMGB3P20-201ENST00000417997 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMGB3P20-201ENST00000417997 PCDHA11Q9Y5I1 949 aa5.74□□□□□ -1.49
HMGB3P20-201ENST00000417997 HECW1Q76N89 1606 aa5.74□□□□□ -1.49
HMGB3P20-201ENST00000417997 FHOD3Q2V2M9 1422 aa5.74□□□□□ -1.49
HMGB3P20-201ENST00000417997 TIAM1Q13009 1591 aa5.73□□□□□ -1.49
HMGB3P20-201ENST00000417997 FYCO1Q9BQS8 1478 aa5.73□□□□□ -1.49
HMGB3P20-201ENST00000417997 RGS13O14921 159 aa5.73□□□□□ -1.49
HMGB3P20-201ENST00000417997 POLR2BP30876 1174 aaKnown RBP5.73□□□□□ -1.49
HMGB3P20-201ENST00000417997 ERVFC1P60507 584 aa5.73□□□□□ -1.49
HMGB3P20-201ENST00000417997 RNF4P78317 190 aa5.73□□□□□ -1.49
HMGB3P20-201ENST00000417997 TRIM26Q12899 539 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P20-201ENST00000417997 KIAA0825Q8IV33 1275 aa5.73□□□□□ -1.49
HMGB3P20-201ENST00000417997 MYLIPQ8WY64 445 aa5.73□□□□□ -1.49
HMGB3P20-201ENST00000417997 NKD1Q969G9 470 aa5.73□□□□□ -1.49
HMGB3P20-201ENST00000417997 SPON2Q9BUD6 331 aa5.73□□□□□ -1.49
HMGB3P20-201ENST00000417997 UGGT2Q9NYU1 1516 aa5.73□□□□□ -1.49
HMGB3P20-201ENST00000417997 TTBK1Q5TCY1 1321 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P20-201ENST00000417997 LRRIQ1Q96JM4 1722 aa5.72□□□□□ -1.49
HMGB3P20-201ENST00000417997 SHISA3A0PJX4 238 aa5.72□□□□□ -1.49
HMGB3P20-201ENST00000417997 UBOX5O94941 541 aa5.72□□□□□ -1.49
HMGB3P20-201ENST00000417997 SRFP11831 508 aa5.72□□□□□ -1.49
HMGB3P20-201ENST00000417997 TRHRP34981 398 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P20-201ENST00000417997 ZNF165P49910 485 aa5.72□□□□□ -1.49
HMGB3P20-201ENST00000417997 CLCQ05315 142 aa5.72□□□□□ -1.49
HMGB3P20-201ENST00000417997 PRR23BQ6ZRT6 265 aa5.72□□□□□ -1.49
HMGB3P20-201ENST00000417997 HOMEZQ8IX15 550 aa5.72□□□□□ -1.49
HMGB3P20-201ENST00000417997 DIRC2Q96SL1 478 aa5.72□□□□□ -1.49
HMGB3P20-201ENST00000417997 PCGF6Q9BYE7 350 aa5.72□□□□□ -1.49
HMGB3P20-201ENST00000417997 KIAA0586Q9BVV6 1533 aa5.72□□□□□ -1.49
HMGB3P20-201ENST00000417997 FMN1Q68DA7 1419 aa5.72□□□□□ -1.49
HMGB3P20-201ENST00000417997 BTBD11A6QL63 1104 aa5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 ATE1O95260 518 aa5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 NMIQ13287 307 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 NLRC3Q7RTR2 1065 aa5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 USP48Q86UV5 1035 aa5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 DHX38Q92620 1227 aaKnown RBP5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 ZNF512BQ96KM6 892 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 FAM84AQ96KN4 292 aa5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 BACH2Q9BYV9 841 aa5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 NSUN3Q9H649 340 aaKnown RBP5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 ANTXR1Q9H6X2 564 aa5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 EHMT1Q9H9B1 1298 aa5.71□□□□□ -1.5
HMGB3P20-201ENST00000417997 MAP3K1Q13233 1512 aa5.7□□□□□ -1.5
HMGB3P20-201ENST00000417997 FAM86C2PA6NEL3 165 aa5.7□□□□□ -1.5
HMGB3P20-201ENST00000417997 CLEC3AO75596 197 aa5.7□□□□□ -1.5
HMGB3P20-201ENST00000417997 REXO1Q8N1G1 1221 aaKnown RBP5.7□□□□□ -1.5
HMGB3P20-201ENST00000417997 OXR1Q8N573 874 aa5.7□□□□□ -1.5
HMGB3P20-201ENST00000417997 ATG4CQ96DT6 458 aa5.7□□□□□ -1.5
HMGB3P20-201ENST00000417997 NT5C1AQ9BXI3 368 aa5.7□□□□□ -1.5
HMGB3P20-201ENST00000417997 C19orf44Q9H6X5 657 aa5.7□□□□□ -1.5
HMGB3P20-201ENST00000417997 PCDHGB7Q9Y5F8 929 aa5.7□□□□□ -1.5
HMGB3P20-201ENST00000417997 NUP160Q12769 1436 aa5.7□□□□□ -1.5
HMGB3P20-201ENST00000417997 RAPGEF6Q8TEU7 1601 aa5.7□□□□□ -1.5
HMGB3P20-201ENST00000417997 CASKIN1Q8WXD9 1431 aa5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 SSU72P8A0A1W2PR75 194 aa5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 RBM47A0AV96 593 aaKnown RBP5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 HPXP02790 462 aa5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 ZGLP1P0C6A0 271 aa5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 RPL10P27635 214 aaKnown RBP5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 FZD5Q13467 585 aa5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 LRRFIP1Q32MZ4 808 aaKnown RBP5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 ZNF394Q53GI3 561 aa5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 NBPF12Q5TAG4 269 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 CDCP2Q5VXM1 449 aa5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 FBXW10Q5XX13 1052 aa5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 TMC3Q7Z5M5 1100 aa5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 EAF1Q96JC9 268 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 MKRN2Q9H000 416 aaKnown RBP5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 CNNM2Q9H8M5 875 aa5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 DCP1AQ9NPI6 582 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 ZMYM5Q9UJ78 669 aa5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 CCDC18Q5T9S5 1454 aa5.69□□□□□ -1.5
HMGB3P20-201ENST00000417997 ARID1BQ8NFD5 2236 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 SUPT6HQ7KZ85 1726 aaKnown RBP5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 SHROOM2Q13796 1616 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 FKTNO75072 461 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms