RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 JDP2Q8WYK2 163 aa19.26■□□□□ 0.67
SSBP3-205ENST00000417664 SGIP1Q9BQI5 828 aa19.26■□□□□ 0.67
SSBP3-205ENST00000417664 RIOX1Q9H6W3 641 aa19.26■□□□□ 0.67
SSBP3-205ENST00000417664 DNAJC18Q9H819 358 aa19.26■□□□□ 0.67
SSBP3-205ENST00000417664 KANSL2Q9H9L4 492 aa19.26■□□□□ 0.67
SSBP3-205ENST00000417664 CLIP2Q9UDT6 1046 aa19.26■□□□□ 0.67
SSBP3-205ENST00000417664 PCDHA4Q9UN74 947 aa19.26■□□□□ 0.67
SSBP3-205ENST00000417664 GPATCH4Q5T3I0 446 aaKnown RBP19.25■□□□□ 0.67
SSBP3-205ENST00000417664 RESP18Q5W5W9 173 aa19.25■□□□□ 0.67
SSBP3-205ENST00000417664 USP17L2Q6R6M4 530 aa19.25■□□□□ 0.67
SSBP3-205ENST00000417664 CKAP2LQ8IYA6 745 aa19.25■□□□□ 0.67
SSBP3-205ENST00000417664 BLIDQ8IZY5 108 aa19.25■□□□□ 0.67
SSBP3-205ENST00000417664 RNF214Q8ND24 703 aa19.25■□□□□ 0.67
SSBP3-205ENST00000417664 MKL1Q969V6 931 aa19.25■□□□□ 0.67
SSBP3-205ENST00000417664 NYAP2Q9P242 653 aa19.25■□□□□ 0.67
SSBP3-205ENST00000417664 SEC63Q9UGP8 760 aaKnown RBP19.25■□□□□ 0.67
SSBP3-205ENST00000417664 HERC5Q9UII4 1024 aaKnown RBP19.25■□□□□ 0.67
SSBP3-205ENST00000417664 HPSEQ9Y251 543 aa19.25■□□□□ 0.67
SSBP3-205ENST00000417664 SRPRBQ9Y5M8 271 aaKnown RBP19.25■□□□□ 0.67
SSBP3-205ENST00000417664 FER1L6Q2WGJ9 1857 aa19.25■□□□□ 0.67
SSBP3-205ENST00000417664 LTBP3Q9NS15 1303 aa19.25■□□□□ 0.67
SSBP3-205ENST00000417664 COL4A5P29400 1685 aa19.25■□□□□ 0.67
SSBP3-205ENST00000417664 SIPA1L1O43166 1804 aa19.25■□□□□ 0.67
SSBP3-205ENST00000417664 BAZ2BQ9UIF8 2168 aaKnown RBP19.25■□□□□ 0.67
SSBP3-205ENST00000417664 PFKFB1P16118 471 aa19.24■□□□□ 0.67
SSBP3-205ENST00000417664 R3HDM1Q15032 1099 aaKnown RBP19.24■□□□□ 0.67
SSBP3-205ENST00000417664 SLC35G1Q2M3R5 365 aa19.24■□□□□ 0.67
SSBP3-205ENST00000417664 TMEM179Q6ZVK1 233 aa19.24■□□□□ 0.67
SSBP3-205ENST00000417664 SDF4Q9BRK5 362 aa19.24■□□□□ 0.67
SSBP3-205ENST00000417664 PCDHB6Q9Y5E3 794 aa19.24■□□□□ 0.67
SSBP3-205ENST00000417664 USP17L5A8MUK1 530 aa19.24■□□□□ 0.67
SSBP3-205ENST00000417664 MPHOSPH10O00566 681 aaKnown RBP19.24■□□□□ 0.67
SSBP3-205ENST00000417664 ZNF202O95125 648 aa19.24■□□□□ 0.67
SSBP3-205ENST00000417664 TNIP1Q15025 636 aa19.24■□□□□ 0.67
SSBP3-205ENST00000417664 CIAPIN1Q6FI81 312 aa19.24■□□□□ 0.67
SSBP3-205ENST00000417664 FAM200AQ8TCP9 573 aa19.24■□□□□ 0.67
SSBP3-205ENST00000417664 FAM151AQ8WW52 585 aa19.24■□□□□ 0.67
SSBP3-205ENST00000417664 SYNPO2Q9UMS6 1093 aa19.24■□□□□ 0.67
SSBP3-205ENST00000417664 MTMR7Q9Y216 660 aa19.24■□□□□ 0.67
SSBP3-205ENST00000417664 STXBP3O00186 592 aa19.23■□□□□ 0.67
SSBP3-205ENST00000417664 GOLGA8HP0CJ92 632 aa19.23■□□□□ 0.67
SSBP3-205ENST00000417664 SYKP43405 635 aa19.23■□□□□ 0.67
SSBP3-205ENST00000417664 ZNF543Q08ER8 600 aa19.23■□□□□ 0.67
SSBP3-205ENST00000417664 SPDYE2Q495Y8 402 aa19.23■□□□□ 0.67
SSBP3-205ENST00000417664 WWC2Q6AWC2 1192 aa19.23■□□□□ 0.67
SSBP3-205ENST00000417664 SHC4Q6S5L8 630 aa19.23■□□□□ 0.67
SSBP3-205ENST00000417664 ELOA2Q8IYF1 753 aaPredicted RBP19.23■□□□□ 0.67
SSBP3-205ENST00000417664 FERMT2Q96AC1 680 aa19.23■□□□□ 0.67
SSBP3-205ENST00000417664 PDLIM2Q96JY6 352 aa19.23■□□□□ 0.67
SSBP3-205ENST00000417664 ZMYND12Q9H0C1 365 aa19.23■□□□□ 0.67
SSBP3-205ENST00000417664 ZNF70Q9UC06 446 aaPredicted RBP19.23■□□□□ 0.67
SSBP3-205ENST00000417664 FBXO2Q9UK22 296 aaPredicted RBP19.23■□□□□ 0.67
SSBP3-205ENST00000417664 MRVI1Q9Y6F6 885 aa19.23■□□□□ 0.67
SSBP3-205ENST00000417664 ESYT2A0FGR8 921 aa19.22■□□□□ 0.67
SSBP3-205ENST00000417664 MYO1BO43795 1136 aa19.22■□□□□ 0.67
SSBP3-205ENST00000417664 VEGFAP15692 232 aaPredicted RBP19.22■□□□□ 0.67
SSBP3-205ENST00000417664 GNA11P29992 359 aa19.22■□□□□ 0.67
SSBP3-205ENST00000417664 CXCL9Q07325 125 aa19.22■□□□□ 0.67
SSBP3-205ENST00000417664 HEATR3Q7Z4Q2 680 aa19.22■□□□□ 0.67
SSBP3-205ENST00000417664 LRRC47Q8N1G4 583 aaKnown RBP19.22■□□□□ 0.67
SSBP3-205ENST00000417664 PIBF1Q8WXW3 757 aa19.22■□□□□ 0.67
SSBP3-205ENST00000417664 FAM13BQ9NYF5 915 aa19.22■□□□□ 0.67
SSBP3-205ENST00000417664 M0R2N6 131 aa19.21■□□□□ 0.67
SSBP3-205ENST00000417664 RPS12P25398 132 aaKnown RBP19.21■□□□□ 0.67
SSBP3-205ENST00000417664 TTC38Q5R3I4 469 aa19.21■□□□□ 0.67
SSBP3-205ENST00000417664 FAM83AQ86UY5 434 aa19.21■□□□□ 0.67
SSBP3-205ENST00000417664 GPKOWQ92917 476 aaPredicted RBP eCLIP19.21■□□□□ 0.671e-8■■□□□ 12.3
SSBP3-205ENST00000417664 CSRNP1Q96S65 589 aa19.21■□□□□ 0.67
SSBP3-205ENST00000417664 ABCB5Q2M3G0 1257 aa19.2■□□□□ 0.66
SSBP3-205ENST00000417664 EARS2Q5JPH6 523 aaKnown RBP19.2■□□□□ 0.66
SSBP3-205ENST00000417664 C6orf50Q9HD87 102 aa19.2■□□□□ 0.66
SSBP3-205ENST00000417664 ZBTB12Q9Y330 459 aaPredicted RBP19.2■□□□□ 0.66
SSBP3-205ENST00000417664 NFKBIEO00221 500 aa19.2■□□□□ 0.66
SSBP3-205ENST00000417664 EIF6P56537 245 aaKnown RBP19.2■□□□□ 0.66
SSBP3-205ENST00000417664 STX1AQ16623 288 aa19.2■□□□□ 0.66
SSBP3-205ENST00000417664 PIK3AP1Q6ZUJ8 805 aa19.2■□□□□ 0.66
SSBP3-205ENST00000417664 DCAF4Q8WV16 495 aa19.2■□□□□ 0.66
SSBP3-205ENST00000417664 ZBED3Q96IU2 234 aaPredicted RBP19.2■□□□□ 0.66
SSBP3-205ENST00000417664 ANO10Q9NW15 660 aa19.2■□□□□ 0.66
SSBP3-205ENST00000417664 PPP1R1BQ9UD71 204 aaPredicted RBP19.2■□□□□ 0.66
SSBP3-205ENST00000417664 KCNH3Q9ULD8 1083 aa19.2■□□□□ 0.66
SSBP3-205ENST00000417664 MYH4Q9Y623 1939 aa19.19■□□□□ 0.66
SSBP3-205ENST00000417664 CCDC194A0A1B0GVG4 234 aa19.19■□□□□ 0.66
SSBP3-205ENST00000417664 ATP2B1P20020 1258 aa19.19■□□□□ 0.66
SSBP3-205ENST00000417664 NAPAP54920 295 aa19.19■□□□□ 0.66
SSBP3-205ENST00000417664 RBM26Q5T8P6 1007 aaKnown RBP19.19■□□□□ 0.66
SSBP3-205ENST00000417664 TYW1BQ6NUM6 668 aa19.19■□□□□ 0.66
SSBP3-205ENST00000417664 PPP1R18Q6NYC8 613 aa19.19■□□□□ 0.66
SSBP3-205ENST00000417664 TRIM44Q96DX7 344 aaPredicted RBP19.19■□□□□ 0.66
SSBP3-205ENST00000417664 CLIC6Q96NY7 704 aa19.19■□□□□ 0.66
SSBP3-205ENST00000417664 KIAA1468Q9P260 1216 aa19.19■□□□□ 0.66
SSBP3-205ENST00000417664 HOOK1Q9UJC3 728 aaKnown RBP19.19■□□□□ 0.66
SSBP3-205ENST00000417664 FAM205CA6NFA0 338 aa19.18■□□□□ 0.66
SSBP3-205ENST00000417664 TBC1D12O60347 775 aa19.18■□□□□ 0.66
SSBP3-205ENST00000417664 EEF2P13639 858 aaKnown RBP19.18■□□□□ 0.66
SSBP3-205ENST00000417664 ATP2C1P98194 919 aaPredicted RBP19.18■□□□□ 0.66
SSBP3-205ENST00000417664 ICA1Q05084 483 aa19.18■□□□□ 0.66
SSBP3-205ENST00000417664 ANO6Q4KMQ2 910 aa19.18■□□□□ 0.66
SSBP3-205ENST00000417664 ARL6IP4Q66PJ3 421 aaKnown RBP19.18■□□□□ 0.66
SSBP3-205ENST00000417664 KRT25Q7Z3Z0 450 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms