RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 COL9A3Q14050 684 aaPredicted RBP12.15□□□□□ -0.46
HDLBP-206ENST00000417540 MORN1Q5T089 497 aa12.15□□□□□ -0.46
HDLBP-206ENST00000417540 NEDD1Q8NHV4 660 aa12.15□□□□□ -0.46
HDLBP-206ENST00000417540 NPLOC4Q8TAT6 608 aa12.15□□□□□ -0.46
HDLBP-206ENST00000417540 LPAR1Q92633 364 aa12.15□□□□□ -0.46
HDLBP-206ENST00000417540 USP6NLQ92738 828 aa12.15□□□□□ -0.46
HDLBP-206ENST00000417540 SPATC1LQ9H0A9 340 aa12.15□□□□□ -0.46
HDLBP-206ENST00000417540 KANSL2Q9H9L4 492 aa12.15□□□□□ -0.46
HDLBP-206ENST00000417540 MTMR4Q9NYA4 1195 aa12.15□□□□□ -0.46
HDLBP-206ENST00000417540 CLIP2Q9UDT6 1046 aa12.15□□□□□ -0.46
HDLBP-206ENST00000417540 ANAPC4Q9UJX5 808 aa12.15□□□□□ -0.46
HDLBP-206ENST00000417540 PPP1R9AQ9ULJ8 1098 aa12.15□□□□□ -0.46
HDLBP-206ENST00000417540 RABGAP1Q9Y3P9 1069 aa12.15□□□□□ -0.46
HDLBP-206ENST00000417540 TSPY2A6NKD2 308 aa12.14□□□□□ -0.47
HDLBP-206ENST00000417540 RANBP6O60518 1105 aaKnown RBP12.14□□□□□ -0.47
HDLBP-206ENST00000417540 GNRH1P01148 92 aa12.14□□□□□ -0.47
HDLBP-206ENST00000417540 PRMT2P55345 433 aa12.14□□□□□ -0.47
HDLBP-206ENST00000417540 SNAP25P60880 206 aa12.14□□□□□ -0.47
HDLBP-206ENST00000417540 IRF5Q13568 498 aa12.14□□□□□ -0.47
HDLBP-206ENST00000417540 GRB14Q14449 540 aa12.14□□□□□ -0.47
HDLBP-206ENST00000417540 PLS1Q14651 629 aa12.14□□□□□ -0.47
HDLBP-206ENST00000417540 HABP4Q5JVS0 413 aaKnown RBP12.14□□□□□ -0.47
HDLBP-206ENST00000417540 DIS3LQ8TF46 1054 aaKnown RBP12.14□□□□□ -0.47
HDLBP-206ENST00000417540 COA7Q96BR5 231 aa12.14□□□□□ -0.47
HDLBP-206ENST00000417540 APBA2Q99767 749 aa12.14□□□□□ -0.47
HDLBP-206ENST00000417540 ZKSCAN3Q9BRR0 538 aa12.14□□□□□ -0.47
HDLBP-206ENST00000417540 SH2D4AQ9H788 454 aa12.14□□□□□ -0.47
HDLBP-206ENST00000417540 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
HDLBP-206ENST00000417540 TOMM22Q9NS69 142 aa12.14□□□□□ -0.47
HDLBP-206ENST00000417540 ZNF214Q9UL59 606 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-206ENST00000417540 F5H6K3 240 aa12.13□□□□□ -0.47
HDLBP-206ENST00000417540 HMGCRP04035 888 aa12.13□□□□□ -0.47
HDLBP-206ENST00000417540 PRKAR2AP13861 404 aaKnown RBP12.13□□□□□ -0.47
HDLBP-206ENST00000417540 ERCC3P19447 782 aa12.13□□□□□ -0.47
HDLBP-206ENST00000417540 PTH1RQ03431 593 aa12.13□□□□□ -0.47
HDLBP-206ENST00000417540 PDE4BQ07343 736 aa12.13□□□□□ -0.47
HDLBP-206ENST00000417540 KLRC3Q07444 240 aa12.13□□□□□ -0.47
HDLBP-206ENST00000417540 ALX1Q15699 326 aa12.13□□□□□ -0.47
HDLBP-206ENST00000417540 KCTD1Q719H9 257 aa12.13□□□□□ -0.47
HDLBP-206ENST00000417540 PLEKHH3Q7Z736 793 aa12.13□□□□□ -0.47
HDLBP-206ENST00000417540 GTF3C2Q8WUA4 911 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-206ENST00000417540 STAG1Q8WVM7 1258 aa12.13□□□□□ -0.47
HDLBP-206ENST00000417540 SOCS4Q8WXH5 440 aa12.13□□□□□ -0.47
HDLBP-206ENST00000417540 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.13□□□□□ -0.472e-10■■□□□ 13.3
HDLBP-206ENST00000417540 NYAP2Q9P242 653 aa12.13□□□□□ -0.47
HDLBP-206ENST00000417540 BIN2Q9UBW5 565 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-206ENST00000417540 ISY1Q9ULR0 285 aaKnown RBP12.13□□□□□ -0.47
HDLBP-206ENST00000417540 STX8Q9UNK0 236 aa12.13□□□□□ -0.47
HDLBP-206ENST00000417540 FRMPD2Q68DX3 1309 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-206ENST00000417540 RAD50Q92878 1312 aa12.12□□□□□ -0.47
HDLBP-206ENST00000417540 LTBP2Q14767 1821 aa12.12□□□□□ -0.47
HDLBP-206ENST00000417540 ORC4O43929 436 aa12.12□□□□□ -0.47
HDLBP-206ENST00000417540 TTLL1O95922 423 aa12.12□□□□□ -0.47
HDLBP-206ENST00000417540 ZKSCAN1P17029 563 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-206ENST00000417540 CHMLP26374 656 aa12.12□□□□□ -0.47
HDLBP-206ENST00000417540 HOXD10P28358 340 aa12.12□□□□□ -0.47
HDLBP-206ENST00000417540 CCND3P30281 292 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-206ENST00000417540 MAPK4P31152 587 aa12.12□□□□□ -0.47
HDLBP-206ENST00000417540 ARHGEF6Q15052 776 aa12.12□□□□□ -0.47
HDLBP-206ENST00000417540 ZNF444Q8N0Y2 327 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-206ENST00000417540 KIFC2Q96AC6 838 aa12.12□□□□□ -0.47
HDLBP-206ENST00000417540 LENG1Q96BZ8 264 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-206ENST00000417540 SLF1Q9BQI6 1058 aa12.12□□□□□ -0.47
HDLBP-206ENST00000417540 RNF208Q9H0X6 261 aa12.12□□□□□ -0.47
HDLBP-206ENST00000417540 RIPK3Q9Y572 518 aa12.12□□□□□ -0.47
HDLBP-206ENST00000417540 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
HDLBP-206ENST00000417540 B4E1Z4 1266 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 VWA5AO00534 786 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 COBLO75128 1261 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 FGRP09769 529 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 PTPREP23469 700 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 ADORA2AP29274 412 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 MAP2K5Q13163 448 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 COG2Q14746 738 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 MAP3K21Q5TCX8 1036 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 SLFN13Q68D06 897 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 RCSD1Q6JBY9 416 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 STOX1Q6ZVD7 989 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 NCAPG2Q86XI2 1143 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 GMCL1P1Q8NEA9 526 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 TRPV1Q8NER1 839 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 DEFB118Q96PH6 123 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 NUDT12Q9BQG2 462 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 CPVLQ9H3G5 476 aa12.11□□□□□ -0.47
HDLBP-206ENST00000417540 CWC22Q9HCG8 908 aaKnown RBP12.11□□□□□ -0.47
HDLBP-206ENST00000417540 RAVER2Q9HCJ3 691 aaKnown RBP12.11□□□□□ -0.47
HDLBP-206ENST00000417540 PAK6Q9NQU5 681 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-206ENST00000417540 PGK2P07205 417 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 CYP2C19P33261 490 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 RGS2P41220 211 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 NOVP48745 357 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 UBXN2AP68543 259 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 CCDC96Q2M329 555 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 AKNAD1Q5T1N1 836 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 ANO1Q5XXA6 986 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 SNRNP48Q6IEG0 339 aaKnown RBP12.1□□□□□ -0.47
HDLBP-206ENST00000417540 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 UBE2Q1Q7Z7E8 422 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 NBPF11Q86T75 865 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 PXYLP1Q8TE99 480 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms