RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 GJB1P08034 283 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 ZKSCAN1P17029 563 aaPredicted RBP12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 CTDSPL2Q05D32 466 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 PLS1Q14651 629 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 IMMTQ16891 758 aaKnown RBP12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 VPS53Q5VIR6 699 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 CLEC10AQ8IUN9 316 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 SIAH1Q8IUQ4 282 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 PRPF38AQ8NAV1 312 aaKnown RBP12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 CHURC1Q8WUH1 139 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 ESR2Q92731 530 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 APBA2Q99767 749 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 SLF1Q9BQI6 1058 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 SPATC1LQ9H0A9 340 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 PPP1R9AQ9ULJ8 1098 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 STX8Q9UNK0 236 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 ZNF236Q9UL36 1845 aa12.95□□□□□ -0.34
SNRNP25-204ENST00000417493 SMIM22K7EJ46 135 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 ZBED4O75132 1171 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 NDUFB10O96000 172 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 INHAP05111 366 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 FGRP09769 529 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 CCL5P13501 91 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 MAP2K5Q13163 448 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 Q3C1V9 767 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 FAM47AQ5JRC9 791 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 RRP12Q5JTH9 1297 aaKnown RBP12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 FAM83BQ5T0W9 1011 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 AKNAD1Q5T1N1 836 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 SAMD1Q6SPF0 538 aaPredicted RBP12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 ZNF589Q86UQ0 364 aaPredicted RBP12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 FAM160B2Q86V87 743 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 IQCA1Q86XH1 822 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 ABRAQ8N0Z2 381 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 STAG1Q8WVM7 1258 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 PORCNQ9H237 461 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 CNNM2Q9H8M5 875 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 BTBD7Q9P203 1132 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 GJD2Q9UKL4 321 aa12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 ISY1Q9ULR0 285 aaKnown RBP12.94□□□□□ -0.34
SNRNP25-204ENST00000417493 CNMDO75829 334 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 BMP3P12645 472 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 ELNP15502 786 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 CYP2B6P20813 491 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 PTPREP23469 700 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 PDE4AP27815 886 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 SLC1A4P43007 532 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 IKQ13123 557 aaPredicted RBP12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 MORN1Q5T089 497 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 MFSD14CQ5VZR4 134 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 SLFN13Q68D06 897 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 DPP9Q86TI2 863 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 NCAPG2Q86XI2 1143 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 ATG4CQ96DT6 458 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 GMCL1Q96IK5 515 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 TTC14Q96N46 770 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 MOV10L1Q9BXT6 1211 aaKnown RBP12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 HMX1Q9NP08 348 aaPredicted RBP12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 TCP11L1Q9NUJ3 509 aa12.93□□□□□ -0.34
SNRNP25-204ENST00000417493 RPTORQ8N122 1335 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 VWA5AO00534 786 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 FOXP2O15409 715 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 MYCP01106 439 aaPredicted RBP12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 FCER1AP12319 257 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 STAT3P40763 770 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 GJA8P48165 433 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 STAT2P52630 851 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 TRDNQ13061 729 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 GRB14Q14449 540 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 RCSD1Q6JBY9 416 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 CASC1Q6TDU7 716 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 TEX13BQ9BXU2 312 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 KRT23Q9C075 422 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 PLXNA1Q9UIW2 1896 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 PNMA2Q9UL42 364 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 ADAMTS5Q9UNA0 930 aa12.92□□□□□ -0.34
SNRNP25-204ENST00000417493 PLA2G6O60733 806 aa12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 CENPBP07199 599 aaPredicted RBP12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 HOXC6P09630 235 aa12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 TOP1P11387 765 aaKnown RBP12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 GSPT1P15170 499 aaKnown RBP12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 ERCC3P19447 782 aa12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 OAZ1P54368 228 aa12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 HAND2P61296 217 aa12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 KCTD2Q14681 263 aa12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 KIAA1755Q5JYT7 1200 aa12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 KIAA1211Q6ZU35 1233 aa12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 RIOX2Q8IUF8 465 aa12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 LRRC47Q8N1G4 583 aaKnown RBP12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 DCAF4Q8WV16 495 aa12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 USP6NLQ92738 828 aa12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 CCDC136Q96JN2 1154 aa12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 FBXO40Q9UH90 709 aa12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 U3KPZ7 1027 aaPredicted RBP12.91□□□□□ -0.34
SNRNP25-204ENST00000417493 ATP2A1O14983 1001 aa12.9□□□□□ -0.34
SNRNP25-204ENST00000417493 MSCO60682 206 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms