RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 HOXD11P31277 338 aaPredicted RBP13.82□□□□□ -0.2
GABRE-202ENST00000417300 SP3Q02447 781 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 TROAPQ12815 778 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 ARHGEF6Q15052 776 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 NTRK3Q16288 839 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 RTN1Q16799 776 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 NBPF9Q3BBW0 867 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 TATDN1Q6P1N9 297 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 CLEC17AQ6ZS10 378 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 RAB11FIP4Q86YS3 637 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 IFNL1Q8IU54 200 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 CRACR2BQ8N4Y2 399 aaPredicted RBP13.82□□□□□ -0.2
GABRE-202ENST00000417300 RGS22Q8NE09 1264 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 MAP3K14Q99558 947 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 MYL10Q9BUA6 226 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 VEZTQ9HBM0 779 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 RBM28Q9NW13 759 aaKnown RBP13.82□□□□□ -0.2
GABRE-202ENST00000417300 HERC5Q9UII4 1024 aaKnown RBP13.82□□□□□ -0.2
GABRE-202ENST00000417300 PTCH2Q9Y6C5 1203 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 STK36Q9NRP7 1315 aa13.82□□□□□ -0.2
GABRE-202ENST00000417300 TTC28Q96AY4 2481 aa13.81□□□□□ -0.2
GABRE-202ENST00000417300 AKR1B1P15121 316 aa13.81□□□□□ -0.2
GABRE-202ENST00000417300 IFNAR1P17181 557 aa13.81□□□□□ -0.2
GABRE-202ENST00000417300 ADD1P35611 737 aaKnown RBP13.81□□□□□ -0.2
GABRE-202ENST00000417300 TNNI2P48788 182 aa13.81□□□□□ -0.2
GABRE-202ENST00000417300 TNFAIP1Q13829 316 aa13.81□□□□□ -0.2
GABRE-202ENST00000417300 PPP4R3BQ5MIZ7 849 aa13.81□□□□□ -0.2
GABRE-202ENST00000417300 LARP1BQ659C4 914 aaKnown RBP13.81□□□□□ -0.2
GABRE-202ENST00000417300 FAM184AQ8NB25 1140 aa13.81□□□□□ -0.2
GABRE-202ENST00000417300 FANCBQ8NB91 859 aa13.81□□□□□ -0.2
GABRE-202ENST00000417300 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.81□□□□□ -0.2
GABRE-202ENST00000417300 TRIM34Q9BYJ4 488 aa13.81□□□□□ -0.2
GABRE-202ENST00000417300 KAT14Q9H8E8 782 aa13.81□□□□□ -0.2
GABRE-202ENST00000417300 MTMR6Q9Y217 621 aa13.81□□□□□ -0.2
GABRE-202ENST00000417300 MANSC4A6NHS7 340 aaPredicted RBP13.8□□□□□ -0.2
GABRE-202ENST00000417300 ZSCAN22P10073 491 aaPredicted RBP13.8□□□□□ -0.2
GABRE-202ENST00000417300 FDPSP14324 419 aaKnown RBP13.8□□□□□ -0.2
GABRE-202ENST00000417300 PNMA1Q8ND90 353 aa13.8□□□□□ -0.2
GABRE-202ENST00000417300 NUP133Q8WUM0 1156 aa13.8□□□□□ -0.2
GABRE-202ENST00000417300 DDX11Q96FC9 970 aa13.8□□□□□ -0.2
GABRE-202ENST00000417300 CEP95Q96GE4 821 aa13.8□□□□□ -0.2
GABRE-202ENST00000417300 GBP4Q96PP9 640 aa13.8□□□□□ -0.2
GABRE-202ENST00000417300 ORC3Q9UBD5 711 aaPredicted RBP13.8□□□□□ -0.2
GABRE-202ENST00000417300 TBC1D12O60347 775 aa13.79□□□□□ -0.2
GABRE-202ENST00000417300 DTNBO60941 627 aa13.79□□□□□ -0.2
GABRE-202ENST00000417300 TOP1P11387 765 aaKnown RBP13.79□□□□□ -0.2
GABRE-202ENST00000417300 NF2P35240 595 aa13.79□□□□□ -0.2
GABRE-202ENST00000417300 NFKBIBQ15653 356 aa13.79□□□□□ -0.2
GABRE-202ENST00000417300 SPRYD7Q5W111 196 aa13.79□□□□□ -0.2
GABRE-202ENST00000417300 CCDC144CPQ8IYA2 1237 aa13.79□□□□□ -0.2
GABRE-202ENST00000417300 CTCFLQ8NI51 663 aaPredicted RBP13.79□□□□□ -0.2
GABRE-202ENST00000417300 TMEM47Q9BQJ4 181 aa13.79□□□□□ -0.2
GABRE-202ENST00000417300 MTMR4Q9NYA4 1195 aa13.79□□□□□ -0.2
GABRE-202ENST00000417300 STX8Q9UNK0 236 aa13.79□□□□□ -0.2
GABRE-202ENST00000417300 MYH6P13533 1939 aa13.79□□□□□ -0.2
GABRE-202ENST00000417300 MYH4Q9Y623 1939 aa13.79□□□□□ -0.2
GABRE-202ENST00000417300 FMNL1O95466 1100 aaPredicted RBP13.78□□□□□ -0.2
GABRE-202ENST00000417300 F13A1P00488 732 aa13.78□□□□□ -0.2
GABRE-202ENST00000417300 KIF5BP33176 963 aa13.78□□□□□ -0.2
GABRE-202ENST00000417300 MAP3K10Q02779 954 aa13.78□□□□□ -0.2
GABRE-202ENST00000417300 GRM4Q14833 912 aa13.78□□□□□ -0.2
GABRE-202ENST00000417300 CERKLQ49MI3 558 aaPredicted RBP13.78□□□□□ -0.2
GABRE-202ENST00000417300 PRAMEF18Q5VWM3 479 aa13.78□□□□□ -0.2
GABRE-202ENST00000417300 OTUD7BQ6GQQ9 843 aa13.78□□□□□ -0.2
GABRE-202ENST00000417300 TMTC3Q6ZXV5 915 aa13.78□□□□□ -0.2
GABRE-202ENST00000417300 SH3TC2Q8TF17 1288 aa13.78□□□□□ -0.2
GABRE-202ENST00000417300 SYMPKQ92797 1274 aaKnown RBP13.78□□□□□ -0.2
GABRE-202ENST00000417300 RNF26Q9BY78 433 aaPredicted RBP13.78□□□□□ -0.2
GABRE-202ENST00000417300 TMEM39BQ9GZU3 492 aa13.78□□□□□ -0.2
GABRE-202ENST00000417300 RPTORQ8N122 1335 aa13.78□□□□□ -0.2
GABRE-202ENST00000417300 VPS37CA5D8V6 355 aaPredicted RBP13.77□□□□□ -0.21
GABRE-202ENST00000417300 FAM196BA6NMK8 535 aa13.77□□□□□ -0.21
GABRE-202ENST00000417300 EVI5O60447 810 aa13.77□□□□□ -0.21
GABRE-202ENST00000417300 BAG4O95429 457 aaKnown RBP13.77□□□□□ -0.21
GABRE-202ENST00000417300 TTLL1O95922 423 aa13.77□□□□□ -0.21
GABRE-202ENST00000417300 SLURP2P0DP57 97 aa13.77□□□□□ -0.21
GABRE-202ENST00000417300 SSRP1Q08945 709 aaKnown RBP13.77□□□□□ -0.21
GABRE-202ENST00000417300 FUT2Q10981 343 aa13.77□□□□□ -0.21
GABRE-202ENST00000417300 CRHR2Q13324 411 aa13.77□□□□□ -0.21
GABRE-202ENST00000417300 RASA3Q14644 834 aa13.77□□□□□ -0.21
GABRE-202ENST00000417300 TMEM179Q6ZVK1 233 aa13.77□□□□□ -0.21
GABRE-202ENST00000417300 APOBEC3FQ8IUX4 373 aaKnown RBP13.77□□□□□ -0.21
GABRE-202ENST00000417300 TRIM22Q8IYM9 498 aa13.77□□□□□ -0.21
GABRE-202ENST00000417300 SHISA4Q96DD7 197 aa13.77□□□□□ -0.21
GABRE-202ENST00000417300 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.77□□□□□ -0.211e-14■□□□□ 9.3
GABRE-202ENST00000417300 CNTNAP5Q8WYK1 1306 aa13.76□□□□□ -0.21
GABRE-202ENST00000417300 IGF2BP3O00425 579 aaKnown RBP eCLIP13.76□□□□□ -0.21
GABRE-202ENST00000417300 MCM4P33991 863 aa13.76□□□□□ -0.21
GABRE-202ENST00000417300 GNAQP50148 359 aa13.76□□□□□ -0.21
GABRE-202ENST00000417300 CAP1Q01518 475 aa13.76□□□□□ -0.21
GABRE-202ENST00000417300 ABCB5Q2M3G0 1257 aa13.76□□□□□ -0.21
GABRE-202ENST00000417300 ARMC9Q7Z3E5 817 aa13.76□□□□□ -0.21
GABRE-202ENST00000417300 WASF1Q92558 559 aa13.76□□□□□ -0.21
GABRE-202ENST00000417300 PHKBQ93100 1093 aa13.76□□□□□ -0.21
GABRE-202ENST00000417300 TEPSINQ96N21 525 aa13.76□□□□□ -0.21
GABRE-202ENST00000417300 KANSL2Q9H9L4 492 aa13.76□□□□□ -0.21
GABRE-202ENST00000417300 NYAP2Q9P242 653 aa13.76□□□□□ -0.21
GABRE-202ENST00000417300 SCAF8Q9UPN6 1271 aaKnown RBP13.76□□□□□ -0.21
GABRE-202ENST00000417300 ATP6V1DQ9Y5K8 247 aa13.76□□□□□ -0.21
GABRE-202ENST00000417300 MYH15Q9Y2K3 1946 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms