RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 FCER1AP12319 257 aa17.79■□□□□ 0.44
RPS28-201ENST00000417088 PRAMEF19Q5SWL8 479 aa17.79■□□□□ 0.44
RPS28-201ENST00000417088 ANO1Q5XXA6 986 aa17.79■□□□□ 0.44
RPS28-201ENST00000417088 ARRDC4Q8NCT1 418 aa17.79■□□□□ 0.44
RPS28-201ENST00000417088 MAML3Q96JK9 1138 aa17.79■□□□□ 0.44
RPS28-201ENST00000417088 ARPP21Q9UBL0 812 aaPredicted RBP17.79■□□□□ 0.44
RPS28-201ENST00000417088 DNAH12Q6ZR08 3092 aa17.79■□□□□ 0.44
RPS28-201ENST00000417088 GSG1L2A8MUP6 293 aa17.78■□□□□ 0.44
RPS28-201ENST00000417088 SBK1Q52WX2 424 aa17.78■□□□□ 0.44
RPS28-201ENST00000417088 DEFB123Q8N688 67 aa17.78■□□□□ 0.44
RPS28-201ENST00000417088 DCTPP1Q9H773 170 aa17.78■□□□□ 0.44
RPS28-201ENST00000417088 COL6A3P12111 3177 aa17.77■□□□□ 0.44
RPS28-201ENST00000417088 PARP14Q460N5 1801 aa17.77■□□□□ 0.44
RPS28-201ENST00000417088 VWA5AO00534 786 aa17.77■□□□□ 0.44
RPS28-201ENST00000417088 RTP1P59025 263 aa17.77■□□□□ 0.44
RPS28-201ENST00000417088 FAM83BQ5T0W9 1011 aa17.77■□□□□ 0.44
RPS28-201ENST00000417088 Q7L0L9 218 aa17.77■□□□□ 0.44
RPS28-201ENST00000417088 RIOX2Q8IUF8 465 aa17.77■□□□□ 0.44
RPS28-201ENST00000417088 KBTBD3Q8NAB2 608 aa17.77■□□□□ 0.44
RPS28-201ENST00000417088 OSBP2Q969R2 916 aa17.77■□□□□ 0.44
RPS28-201ENST00000417088 GOPCQ9HD26 462 aa17.77■□□□□ 0.44
RPS28-201ENST00000417088 PPP1R9AQ9ULJ8 1098 aa17.77■□□□□ 0.44
RPS28-201ENST00000417088 RAD21O60216 631 aa17.76■□□□□ 0.43
RPS28-201ENST00000417088 RASA1P20936 1047 aa17.76■□□□□ 0.43
RPS28-201ENST00000417088 STAT3P40763 770 aa17.76■□□□□ 0.43
RPS28-201ENST00000417088 TSHZ3Q63HK5 1081 aa17.76■□□□□ 0.43
RPS28-201ENST00000417088 GIMAP6Q6P9H5 292 aa17.76■□□□□ 0.43
RPS28-201ENST00000417088 SLC39A5Q6ZMH5 540 aa17.76■□□□□ 0.43
RPS28-201ENST00000417088 STK11IPQ8N1F8 1099 aa17.76■□□□□ 0.43
RPS28-201ENST00000417088 REPS2Q8NFH8 660 aa17.76■□□□□ 0.43
RPS28-201ENST00000417088 MMP19Q99542 508 aa17.76■□□□□ 0.43
RPS28-201ENST00000417088 ZNF214Q9UL59 606 aaPredicted RBP17.76■□□□□ 0.43
RPS28-201ENST00000417088 KBTBD13C9JR72 458 aa17.75■□□□□ 0.43
RPS28-201ENST00000417088 RNF113AO15541 343 aaKnown RBP17.75■□□□□ 0.43
RPS28-201ENST00000417088 MYCNP04198 464 aaPredicted RBP17.75■□□□□ 0.43
RPS28-201ENST00000417088 PGK2P07205 417 aa17.75■□□□□ 0.43
RPS28-201ENST00000417088 LRRC41Q15345 812 aa17.75■□□□□ 0.43
RPS28-201ENST00000417088 ZNF792Q3KQV3 632 aa17.75■□□□□ 0.43
RPS28-201ENST00000417088 SLC17A8Q8NDX2 589 aa17.75■□□□□ 0.43
RPS28-201ENST00000417088 APPBP2Q92624 585 aa17.75■□□□□ 0.43
RPS28-201ENST00000417088 LBHD1Q9BQE6 289 aaPredicted RBP17.75■□□□□ 0.43
RPS28-201ENST00000417088 MKNK2Q9HBH9 465 aa17.75■□□□□ 0.43
RPS28-201ENST00000417088 ATP11BQ9Y2G3 1177 aa17.75■□□□□ 0.43
RPS28-201ENST00000417088 MINDY4BA8MYZ0 360 aa17.74■□□□□ 0.43
RPS28-201ENST00000417088 KCTD2Q14681 263 aa17.74■□□□□ 0.43
RPS28-201ENST00000417088 FAM47AQ5JRC9 791 aa17.74■□□□□ 0.43
RPS28-201ENST00000417088 NUP88Q99567 741 aaPredicted RBP17.74■□□□□ 0.43
RPS28-201ENST00000417088 EPB41L4AQ9HCS5 686 aaPredicted RBP17.74■□□□□ 0.43
RPS28-201ENST00000417088 MTMR10Q9NXD2 777 aa17.74■□□□□ 0.43
RPS28-201ENST00000417088 NYAP2Q9P242 653 aa17.74■□□□□ 0.43
RPS28-201ENST00000417088 NRBP1Q9UHY1 535 aa17.74■□□□□ 0.43
RPS28-201ENST00000417088 ROBO3Q96MS0 1386 aa17.74■□□□□ 0.43
RPS28-201ENST00000417088 COL11A1P12107 1806 aaPredicted RBP17.74■□□□□ 0.43
RPS28-201ENST00000417088 ZNFX1Q9P2E3 1918 aaKnown RBP17.74■□□□□ 0.43
RPS28-201ENST00000417088 GREB1LQ9C091 1923 aaPredicted RBP17.73■□□□□ 0.43
RPS28-201ENST00000417088 F5H6K3 240 aa17.73■□□□□ 0.43
RPS28-201ENST00000417088 GPAA1O43292 621 aa17.73■□□□□ 0.43
RPS28-201ENST00000417088 ADCYAP1R1P41586 468 aa17.73■□□□□ 0.43
RPS28-201ENST00000417088 KLRC3Q07444 240 aa17.73■□□□□ 0.43
RPS28-201ENST00000417088 GPATCH3Q96I76 525 aa17.73■□□□□ 0.43
RPS28-201ENST00000417088 TINF2Q9BSI4 451 aa17.73■□□□□ 0.43
RPS28-201ENST00000417088 PRKAG2Q9UGJ0 569 aa17.73■□□□□ 0.43
RPS28-201ENST00000417088 DIS3Q9Y2L1 958 aaKnown RBP17.73■□□□□ 0.43
RPS28-201ENST00000417088 NDUFB10O96000 172 aa17.72■□□□□ 0.43
RPS28-201ENST00000417088 ZFYP08048 801 aaPredicted RBP17.72■□□□□ 0.43
RPS28-201ENST00000417088 TAL1P17542 331 aaPredicted RBP17.72■□□□□ 0.43
RPS28-201ENST00000417088 COPB2P35606 906 aa17.72■□□□□ 0.43
RPS28-201ENST00000417088 SNX17Q15036 470 aa17.72■□□□□ 0.43
RPS28-201ENST00000417088 TRIM60Q495X7 471 aa17.72■□□□□ 0.43
RPS28-201ENST00000417088 FERMT2Q96AC1 680 aa17.72■□□□□ 0.43
RPS28-201ENST00000417088 SLF1Q9BQI6 1058 aa17.72■□□□□ 0.43
RPS28-201ENST00000417088 SMCHD1A6NHR9 2005 aa17.72■□□□□ 0.43
RPS28-201ENST00000417088 IGKV6D-41A0A0C4DH26 115 aa17.71■□□□□ 0.43
RPS28-201ENST00000417088 M0R2C6 588 aa17.71■□□□□ 0.43
RPS28-201ENST00000417088 GNAT2P19087 354 aa17.71■□□□□ 0.43
RPS28-201ENST00000417088 TDO2P48775 406 aa17.71■□□□□ 0.43
RPS28-201ENST00000417088 TEX13BQ9BXU2 312 aa17.71■□□□□ 0.43
RPS28-201ENST00000417088 XPNPEP3Q9NQH7 507 aa17.71■□□□□ 0.43
RPS28-201ENST00000417088 CLIP2Q9UDT6 1046 aa17.71■□□□□ 0.43
RPS28-201ENST00000417088 STXBP5LQ9Y2K9 1186 aa17.71■□□□□ 0.43
RPS28-201ENST00000417088 PRDM1O75626 825 aa17.7■□□□□ 0.42
RPS28-201ENST00000417088 ZNF865P0CJ78 1059 aaPredicted RBP17.7■□□□□ 0.42
RPS28-201ENST00000417088 RARBP10826 455 aa17.7■□□□□ 0.42
RPS28-201ENST00000417088 C1orf53Q5VUE5 145 aa17.7■□□□□ 0.42
RPS28-201ENST00000417088 SNRNP48Q6IEG0 339 aaKnown RBP17.7■□□□□ 0.42
RPS28-201ENST00000417088 ZNF444Q8N0Y2 327 aaPredicted RBP17.7■□□□□ 0.42
RPS28-201ENST00000417088 PRPF38AQ8NAV1 312 aaKnown RBP17.7■□□□□ 0.42
RPS28-201ENST00000417088 PHF24Q9UPV7 400 aa17.7■□□□□ 0.42
RPS28-201ENST00000417088 RIPK3Q9Y572 518 aa17.7■□□□□ 0.42
RPS28-201ENST00000417088 PATL2C9JE40 543 aaKnown RBP17.69■□□□□ 0.42
RPS28-201ENST00000417088 POTEB2H3BUK9 544 aa17.69■□□□□ 0.42
RPS28-201ENST00000417088 PGK1P00558 417 aa17.69■□□□□ 0.42
RPS28-201ENST00000417088 APPP05067 770 aa17.69■□□□□ 0.42
RPS28-201ENST00000417088 IFNL3Q8IZI9 196 aa17.69■□□□□ 0.42
RPS28-201ENST00000417088 MKL1Q969V6 931 aa17.69■□□□□ 0.42
RPS28-201ENST00000417088 ZNF287Q9HBT7 754 aa17.69■□□□□ 0.42
RPS28-201ENST00000417088 PRDM5Q9NQX1 630 aaPredicted RBP17.69■□□□□ 0.42
RPS28-201ENST00000417088 PDLIM7Q9NR12 457 aa17.69■□□□□ 0.42
RPS28-201ENST00000417088 MTMR4Q9NYA4 1195 aa17.69■□□□□ 0.42
RPS28-201ENST00000417088 A0A0C4DFX4 3053 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms