RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 BCL9LQ86UU0 1499 aa14.49□□□□□ -0.09
LRRTM1-205ENST00000417012 CTAGE15A4D2H0 777 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 CTAGE8P0CG41 777 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 CASP1P29466 404 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 KRT2P35908 639 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 FXR1P51114 621 aaKnown RBP eCLIP14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 WHAMMP3Q1A5X7 153 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 SH3RF1Q7Z6J0 888 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 CTAGE6Q86UF2 777 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 CTAGE4Q8IX94 777 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 ACRBPQ8NEB7 543 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 MINPP1Q9UNW1 487 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 CTNND2Q9UQB3 1225 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 CASZ1Q86V15 1759 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 COL1A1P02452 1464 aaPredicted RBP14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 CCT6AP40227 531 aaKnown RBP14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 DPYDQ12882 1025 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 LEKR1Q6ZMV7 388 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 MSL3Q8N5Y2 521 aaKnown RBP14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 FEZ2Q9UHY8 353 aaPredicted RBP14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 RTL9Q8NET4 1388 aa14.48□□□□□ -0.09
LRRTM1-205ENST00000417012 LAMB2P55268 1798 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 FAM205CA6NFA0 338 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 RHOXF2BP0C7M4 288 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 FECHP22830 423 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 CLEC4GQ6UXB4 293 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 AMIGO3Q86WK7 504 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 ANKRD20A12PQ8NF67 263 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 RHOXF2Q9BQY4 288 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 ABCB6Q9NP58 842 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 VPS54Q9P1Q0 977 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 MYO1AQ9UBC5 1043 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 CYP2D7A0A087X1C5 515 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 PPP1R3GB7ZBB8 358 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 N4BP3O15049 544 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 TUBBP07437 444 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 ACTN2P35609 894 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 DYNLL1P63167 89 aaKnown RBP14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 L1RE1Q9UN81 338 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 PNPLA7Q6ZV29 1317 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 BCORQ6W2J9 1755 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 SPAG1Q07617 926 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 TRIM14Q14142 442 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 PPP2R5BQ15173 497 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 HSP90B2PQ58FF3 399 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 CYP26C1Q6V0L0 522 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 SLC51AQ86UW1 340 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 NUP88Q99567 741 aaPredicted RBP14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 BRMS1Q9HCU9 246 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 ABHD10Q9NUJ1 306 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 JAG2Q9Y219 1238 aa14.47□□□□□ -0.09
LRRTM1-205ENST00000417012 MYH6P13533 1939 aa14.46□□□□□ -0.09
LRRTM1-205ENST00000417012 BAZ2AQ9UIF9 1905 aaKnown RBP14.46□□□□□ -0.09
LRRTM1-205ENST00000417012 ACBD3Q9H3P7 528 aa14.46□□□□□ -0.09
LRRTM1-205ENST00000417012 BSDC1Q9NW68 430 aaPredicted RBP14.46□□□□□ -0.09
LRRTM1-205ENST00000417012 MAGEB6P1A0A0J9YX57 407 aa14.46□□□□□ -0.1
LRRTM1-205ENST00000417012 VSNL1P62760 191 aa14.46□□□□□ -0.1
LRRTM1-205ENST00000417012 PPARAQ07869 468 aa14.46□□□□□ -0.1
LRRTM1-205ENST00000417012 KRT31Q15323 416 aa14.46□□□□□ -0.1
LRRTM1-205ENST00000417012 FAM84BQ96KN1 310 aaPredicted RBP14.46□□□□□ -0.1
LRRTM1-205ENST00000417012 TFCP2L1Q9NZI6 479 aa14.46□□□□□ -0.1
LRRTM1-205ENST00000417012 TNKSO95271 1327 aa14.46□□□□□ -0.1
LRRTM1-205ENST00000417012 ERVK-24P63145 666 aa14.45□□□□□ -0.1
LRRTM1-205ENST00000417012 EVX2Q03828 476 aa14.45□□□□□ -0.1
LRRTM1-205ENST00000417012 SF3B3Q15393 1217 aaKnown RBP14.45□□□□□ -0.1
LRRTM1-205ENST00000417012 ZNF384Q8TF68 577 aa14.45□□□□□ -0.1
LRRTM1-205ENST00000417012 ESR2Q92731 530 aa14.45□□□□□ -0.1
LRRTM1-205ENST00000417012 PHF20Q9BVI0 1012 aa14.45□□□□□ -0.1
LRRTM1-205ENST00000417012 ZNF804BA4D1E1 1349 aa14.45□□□□□ -0.1
LRRTM1-205ENST00000417012 GNPATO15228 680 aa14.45□□□□□ -0.1
LRRTM1-205ENST00000417012 PRDM1O75626 825 aa14.45□□□□□ -0.1
LRRTM1-205ENST00000417012 CAVIN4Q5BKX8 364 aa14.45□□□□□ -0.1
LRRTM1-205ENST00000417012 LIMA1Q9UHB6 759 aaKnown RBP14.45□□□□□ -0.1
LRRTM1-205ENST00000417012 CICQ96RK0 1608 aaPredicted RBP14.45□□□□□ -0.1
LRRTM1-205ENST00000417012 MYH2Q9UKX2 1941 aa14.45□□□□□ -0.1
LRRTM1-205ENST00000417012 IVLP07476 585 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 CASP8Q14790 479 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 EARS2Q5JPH6 523 aaKnown RBP14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 RRAGBQ5VZM2 374 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 IQUBQ8NA54 791 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 CCDC102AQ96A19 550 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 VPS16Q9H269 839 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 SUGCTQ9HAC7 445 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 MYH8P13535 1937 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 GOLGB1Q14789 3259 aaKnown RBP14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 TFRCP02786 760 aaKnown RBP14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 STAMQ92783 540 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 RASSF4Q9H2L5 321 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 GNL3LQ9NVN8 582 aaKnown RBP14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 MYO6Q9UM54 1294 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 FAN1Q9Y2M0 1017 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 A0A1B0GUL6 1792 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 COPB1P53618 953 aaKnown RBP14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 PAK1Q13153 545 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 ZNF174Q15697 407 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 TTC38Q5R3I4 469 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 WWC2Q6AWC2 1192 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 NBPF5PQ86XG9 351 aaPredicted RBP14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 FAM71BQ8TC56 605 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 SHISA4Q96DD7 197 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms