RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 CLTBP09497 229 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 CYP2D6P10635 497 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 FOSL2P15408 326 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 RAG1P15918 1043 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 EVX2Q03828 476 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 TLE2Q04725 743 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 KCTD2Q14681 263 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 SH3RF1Q7Z6J0 888 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 CLASRPQ8N2M8 674 aaKnown RBP12.1□□□□□ -0.47
MDC1-202ENST00000416571 LCORLQ8N3X6 602 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 MYLIPQ8WY64 445 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
MDC1-202ENST00000416571 DYNLL2Q96FJ2 89 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 DDRGK1Q96HY6 314 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 RNPC3Q96LT9 517 aaKnown RBP12.1□□□□□ -0.47
MDC1-202ENST00000416571 CCDC17Q96LX7 622 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 MMP19Q99542 508 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 NRBP1Q9UHY1 535 aa12.1□□□□□ -0.47
MDC1-202ENST00000416571 BAZ2AQ9UIF9 1905 aaKnown RBP12.09□□□□□ -0.47
MDC1-202ENST00000416571 APBB1O00213 710 aa12.09□□□□□ -0.47
MDC1-202ENST00000416571 PQBP1O60828 265 aaKnown RBP12.09□□□□□ -0.47
MDC1-202ENST00000416571 IFIT2P09913 472 aaKnown RBP12.09□□□□□ -0.47
MDC1-202ENST00000416571 RLBP1P12271 317 aa12.09□□□□□ -0.47
MDC1-202ENST00000416571 AKR1B1P15121 316 aa12.09□□□□□ -0.47
MDC1-202ENST00000416571 TMEM132BQ14DG7 1078 aa12.09□□□□□ -0.47
MDC1-202ENST00000416571 KIAA1755Q5JYT7 1200 aa12.09□□□□□ -0.47
MDC1-202ENST00000416571 CLEC10AQ8IUN9 316 aa12.09□□□□□ -0.47
MDC1-202ENST00000416571 RHPN1Q8TCX5 695 aa12.09□□□□□ -0.47
MDC1-202ENST00000416571 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.09□□□□□ -0.47
MDC1-202ENST00000416571 ARMT1Q9H993 441 aa12.09□□□□□ -0.47
MDC1-202ENST00000416571 PHF24Q9UPV7 400 aa12.09□□□□□ -0.47
MDC1-202ENST00000416571 SMCHD1A6NHR9 2005 aa12.08□□□□□ -0.48
MDC1-202ENST00000416571 PGK1P00558 417 aa12.08□□□□□ -0.48
MDC1-202ENST00000416571 PGK2P07205 417 aa12.08□□□□□ -0.48
MDC1-202ENST00000416571 AKR1A1P14550 325 aa12.08□□□□□ -0.48
MDC1-202ENST00000416571 COPB2P35606 906 aa12.08□□□□□ -0.48
MDC1-202ENST00000416571 FPGSQ05932 587 aa12.08□□□□□ -0.48
MDC1-202ENST00000416571 RIOX2Q8IUF8 465 aa12.08□□□□□ -0.48
MDC1-202ENST00000416571 KIF1BPQ96EK5 621 aa12.08□□□□□ -0.48
MDC1-202ENST00000416571 TINF2Q9BSI4 451 aa12.08□□□□□ -0.48
MDC1-202ENST00000416571 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.08□□□□□ -0.48
MDC1-202ENST00000416571 TTYH1Q9H313 450 aaPredicted RBP12.08□□□□□ -0.48
MDC1-202ENST00000416571 GOPCQ9HD26 462 aa12.08□□□□□ -0.48
MDC1-202ENST00000416571 ATP8A2Q9NTI2 1148 aa12.08□□□□□ -0.48
MDC1-202ENST00000416571 CNPY2Q9Y2B0 182 aa12.08□□□□□ -0.48
MDC1-202ENST00000416571 LAMA2P24043 3122 aaKnown RBP12.07□□□□□ -0.48
MDC1-202ENST00000416571 TMEM265A0A087WTH1 108 aa12.07□□□□□ -0.48
MDC1-202ENST00000416571 A0A1W2PQ45 241 aaPredicted RBP12.07□□□□□ -0.48
MDC1-202ENST00000416571 A0A1W2PQY0 241 aa12.07□□□□□ -0.48
MDC1-202ENST00000416571 TCRBV5S4A2TA0A5A2 114 aa12.07□□□□□ -0.48
MDC1-202ENST00000416571 DCDC2CA8MYV0 355 aa12.07□□□□□ -0.48
MDC1-202ENST00000416571 MBD4O95243 580 aa12.07□□□□□ -0.48
MDC1-202ENST00000416571 STAT3P40763 770 aa12.07□□□□□ -0.48
MDC1-202ENST00000416571 CDK8P49336 464 aa12.07□□□□□ -0.48
MDC1-202ENST00000416571 PRUNE2Q8WUY3 3088 aa12.07□□□□□ -0.48
MDC1-202ENST00000416571 SYMPKQ92797 1274 aaKnown RBP12.07□□□□□ -0.48
MDC1-202ENST00000416571 KANSL2Q9H9L4 492 aa12.07□□□□□ -0.48
MDC1-202ENST00000416571 STARD7Q9NQZ5 370 aa12.07□□□□□ -0.48
MDC1-202ENST00000416571 TMEM39AQ9NV64 488 aa12.07□□□□□ -0.48
MDC1-202ENST00000416571 PAG1Q9NWQ8 432 aa12.07□□□□□ -0.48
MDC1-202ENST00000416571 DIS3Q9Y2L1 958 aaKnown RBP12.07□□□□□ -0.48
MDC1-202ENST00000416571 ROBO3Q96MS0 1386 aa12.06□□□□□ -0.48
MDC1-202ENST00000416571 VWA5AO00534 786 aa12.06□□□□□ -0.48
MDC1-202ENST00000416571 KIAA0355O15063 1070 aa12.06□□□□□ -0.48
MDC1-202ENST00000416571 PRKAB2O43741 272 aa12.06□□□□□ -0.48
MDC1-202ENST00000416571 HMMRO75330 724 aa12.06□□□□□ -0.48
MDC1-202ENST00000416571 EEF2P13639 858 aaKnown RBP12.06□□□□□ -0.48
MDC1-202ENST00000416571 C12orf60Q5U649 245 aa12.06□□□□□ -0.48
MDC1-202ENST00000416571 SIAH1Q8IUQ4 282 aa12.06□□□□□ -0.48
MDC1-202ENST00000416571 NUP133Q8WUM0 1156 aa12.06□□□□□ -0.48
MDC1-202ENST00000416571 FBXO28Q9NVF7 368 aa12.06□□□□□ -0.48
MDC1-202ENST00000416571 PPP1R9AQ9ULJ8 1098 aa12.06□□□□□ -0.48
MDC1-202ENST00000416571 MYH7P12883 1935 aa12.05□□□□□ -0.48
MDC1-202ENST00000416571 CYP2D7A0A087X1C5 515 aa12.05□□□□□ -0.48
MDC1-202ENST00000416571 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.05□□□□□ -0.48
MDC1-202ENST00000416571 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.05□□□□□ -0.48
MDC1-202ENST00000416571 USP17L12C9JPN9 530 aa12.05□□□□□ -0.48
MDC1-202ENST00000416571 USP17L21D6R901 530 aa12.05□□□□□ -0.48
MDC1-202ENST00000416571 ITGB8P26012 769 aa12.05□□□□□ -0.48
MDC1-202ENST00000416571 ADD2P35612 726 aa12.05□□□□□ -0.48
MDC1-202ENST00000416571 HNRNPUQ00839 825 aaKnown RBP eCLIP12.05□□□□□ -0.48
MDC1-202ENST00000416571 ZNF792Q3KQV3 632 aa12.05□□□□□ -0.48
MDC1-202ENST00000416571 FAM83BQ5T0W9 1011 aa12.05□□□□□ -0.48
MDC1-202ENST00000416571 C16orf86Q6ZW13 317 aa12.05□□□□□ -0.48
MDC1-202ENST00000416571 DDX11Q96FC9 970 aa12.05□□□□□ -0.48
MDC1-202ENST00000416571 TSEN34Q9BSV6 310 aaKnown RBP12.05□□□□□ -0.48
MDC1-202ENST00000416571 ZHX1Q9UKY1 873 aaPredicted RBP12.05□□□□□ -0.48
MDC1-202ENST00000416571 ADAMTS5Q9UNA0 930 aa12.05□□□□□ -0.48
MDC1-202ENST00000416571 CTDP1Q9Y5B0 961 aaPredicted RBP12.05□□□□□ -0.48
MDC1-202ENST00000416571 ADAMTS4O75173 837 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 ZNF865P0CJ78 1059 aaPredicted RBP12.04□□□□□ -0.48
MDC1-202ENST00000416571 MS4A1P11836 297 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 TAL1P17542 331 aaPredicted RBP12.04□□□□□ -0.48
MDC1-202ENST00000416571 DNAJB2P25686 324 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 SLC4A3P48751 1232 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 ACLYP53396 1101 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 EPHB4P54760 987 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 ZSCAN25Q6NSZ9 544 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 CCDC174Q6PII3 467 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 RPAP2Q8IXW5 612 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms