RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TACC3Q9Y6A5 838 aa18.59■□□□□ 0.57
DDX56-202ENST00000415758 TLE2Q04725 743 aa18.58■□□□□ 0.56
DDX56-202ENST00000415758 C12orf60Q5U649 245 aa18.58■□□□□ 0.56
DDX56-202ENST00000415758 RIOX2Q8IUF8 465 aa18.58■□□□□ 0.56
DDX56-202ENST00000415758 FERMT2Q96AC1 680 aa18.58■□□□□ 0.56
DDX56-202ENST00000415758 DNAJC2Q99543 621 aaKnown RBP18.58■□□□□ 0.56
DDX56-202ENST00000415758 ARMT1Q9H993 441 aa18.58■□□□□ 0.56
DDX56-202ENST00000415758 XPNPEP3Q9NQH7 507 aa18.58■□□□□ 0.56
DDX56-202ENST00000415758 COL11A1P12107 1806 aaPredicted RBP18.58■□□□□ 0.56
DDX56-202ENST00000415758 ROBO3Q96MS0 1386 aa18.57■□□□□ 0.56
DDX56-202ENST00000415758 BAZ2AQ9UIF9 1905 aaKnown RBP18.57■□□□□ 0.56
DDX56-202ENST00000415758 PRKAB2O43741 272 aa18.57■□□□□ 0.56
DDX56-202ENST00000415758 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
DDX56-202ENST00000415758 RARBP10826 455 aa18.57■□□□□ 0.56
DDX56-202ENST00000415758 ADD2P35612 726 aa18.57■□□□□ 0.56
DDX56-202ENST00000415758 CDK8P49336 464 aa18.57■□□□□ 0.56
DDX56-202ENST00000415758 CLEC10AQ8IUN9 316 aa18.57■□□□□ 0.56
DDX56-202ENST00000415758 RPAP2Q8IXW5 612 aaPredicted RBP18.57■□□□□ 0.56
DDX56-202ENST00000415758 TINF2Q9BSI4 451 aa18.57■□□□□ 0.56
DDX56-202ENST00000415758 TTYH1Q9H313 450 aaPredicted RBP18.57■□□□□ 0.56
DDX56-202ENST00000415758 KANSL2Q9H9L4 492 aa18.57■□□□□ 0.56
DDX56-202ENST00000415758 IFIT2P09913 472 aaKnown RBP18.56■□□□□ 0.56
DDX56-202ENST00000415758 ZNF792Q3KQV3 632 aa18.56■□□□□ 0.56
DDX56-202ENST00000415758 C16orf86Q6ZW13 317 aa18.56■□□□□ 0.56
DDX56-202ENST00000415758 RNF180Q86T96 592 aa18.56■□□□□ 0.56
DDX56-202ENST00000415758 MMP19Q99542 508 aa18.56■□□□□ 0.56
DDX56-202ENST00000415758 PAG1Q9NWQ8 432 aa18.56■□□□□ 0.56
DDX56-202ENST00000415758 SPTBN5Q9NRC6 3674 aaKnown RBP18.56■□□□□ 0.56
DDX56-202ENST00000415758 PLXNA1Q9UIW2 1896 aa18.56■□□□□ 0.56
DDX56-202ENST00000415758 PRUNE2Q8WUY3 3088 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 TMEM265A0A087WTH1 108 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 USP17L12C9JPN9 530 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 USP17L21D6R901 530 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 VWA5AO00534 786 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 KIAA0355O15063 1070 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 MBD4O95243 580 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 CLTBP09497 229 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 ZNF865P0CJ78 1059 aaPredicted RBP18.55■□□□□ 0.56
DDX56-202ENST00000415758 EEF2P13639 858 aaKnown RBP18.55■□□□□ 0.56
DDX56-202ENST00000415758 ITGB8P26012 769 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 COPB2P35606 906 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 STAT3P40763 770 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 KCTD2Q14681 263 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 MAFAQ8NHW3 353 aaPredicted RBP18.55■□□□□ 0.56
DDX56-202ENST00000415758 PANK1Q8TE04 598 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 ZNF214Q9UL59 606 aaPredicted RBP18.55■□□□□ 0.56
DDX56-202ENST00000415758 PPP1R9AQ9ULJ8 1098 aa18.55■□□□□ 0.56
DDX56-202ENST00000415758 ZBED9Q6R2W3 1325 aa18.54■□□□□ 0.56
DDX56-202ENST00000415758 SMIM22K7EJ46 135 aa18.54■□□□□ 0.56
DDX56-202ENST00000415758 RAB11FIP3O75154 756 aa18.54■□□□□ 0.56
DDX56-202ENST00000415758 PGK1P00558 417 aa18.54■□□□□ 0.56
DDX56-202ENST00000415758 PGK2P07205 417 aa18.54■□□□□ 0.56
DDX56-202ENST00000415758 AKR1A1P14550 325 aa18.54■□□□□ 0.56
DDX56-202ENST00000415758 ATP5JP18859 108 aa18.54■□□□□ 0.56
DDX56-202ENST00000415758 UBE3CQ15386 1083 aa18.54■□□□□ 0.56
DDX56-202ENST00000415758 AMOTL1Q8IY63 956 aa18.54■□□□□ 0.56
DDX56-202ENST00000415758 MSL3Q8N5Y2 521 aaKnown RBP18.54■□□□□ 0.56
DDX56-202ENST00000415758 REPS2Q8NFH8 660 aa18.54■□□□□ 0.56
DDX56-202ENST00000415758 TSEN34Q9BSV6 310 aaKnown RBP18.54■□□□□ 0.56
DDX56-202ENST00000415758 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.54■□□□□ 0.563e-6■■□□□ 12.3
DDX56-202ENST00000415758 FBXO28Q9NVF7 368 aa18.54■□□□□ 0.56
DDX56-202ENST00000415758 CYP2D7A0A087X1C5 515 aa18.53■□□□□ 0.56
DDX56-202ENST00000415758 HMMRO75330 724 aa18.53■□□□□ 0.56
DDX56-202ENST00000415758 TAL1P17542 331 aaPredicted RBP18.53■□□□□ 0.56
DDX56-202ENST00000415758 SLFNL1Q499Z3 407 aa18.53■□□□□ 0.56
DDX56-202ENST00000415758 ANKRD33Q7Z3H0 272 aa18.53■□□□□ 0.56
DDX56-202ENST00000415758 SIRT2Q8IXJ6 389 aa18.53■□□□□ 0.56
DDX56-202ENST00000415758 TOX2Q96NM4 488 aa18.53■□□□□ 0.56
DDX56-202ENST00000415758 HAUS7Q99871 368 aa18.53■□□□□ 0.56
DDX56-202ENST00000415758 GOPCQ9HD26 462 aa18.53■□□□□ 0.56
DDX56-202ENST00000415758 A0A1W2PQ45 241 aaPredicted RBP18.52■□□□□ 0.56
DDX56-202ENST00000415758 A0A1W2PQY0 241 aa18.52■□□□□ 0.56
DDX56-202ENST00000415758 ADAMTS4O75173 837 aa18.52■□□□□ 0.56
DDX56-202ENST00000415758 EPHB4P54760 987 aa18.52■□□□□ 0.56
DDX56-202ENST00000415758 HNRNPUQ00839 825 aaKnown RBP eCLIP18.52■□□□□ 0.56
DDX56-202ENST00000415758 SAMD1Q6SPF0 538 aaPredicted RBP18.52■□□□□ 0.56
DDX56-202ENST00000415758 MYLIPQ8WY64 445 aa18.52■□□□□ 0.56
DDX56-202ENST00000415758 DDRGK1Q96HY6 314 aa18.52■□□□□ 0.56
DDX56-202ENST00000415758 BOLA2Q9H3K6 86 aa18.52■□□□□ 0.56
DDX56-202ENST00000415758 APBB1O00213 710 aa18.51■□□□□ 0.55
DDX56-202ENST00000415758 MS4A1P11836 297 aa18.51■□□□□ 0.55
DDX56-202ENST00000415758 RAG1P15918 1043 aa18.51■□□□□ 0.55
DDX56-202ENST00000415758 CTR9Q6PD62 1173 aa18.51■□□□□ 0.55
DDX56-202ENST00000415758 RNPC3Q96LT9 517 aaKnown RBP18.51■□□□□ 0.55
DDX56-202ENST00000415758 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.51■□□□□ 0.55
DDX56-202ENST00000415758 ZBTB40Q9NUA8 1239 aa18.51■□□□□ 0.55
DDX56-202ENST00000415758 CNPY2Q9Y2B0 182 aa18.51■□□□□ 0.55
DDX56-202ENST00000415758 MYH7P12883 1935 aa18.51■□□□□ 0.55
DDX56-202ENST00000415758 GREB1LQ9C091 1923 aaPredicted RBP18.51■□□□□ 0.55
DDX56-202ENST00000415758 MOXD2PA6NHM9 499 aa18.5■□□□□ 0.55
DDX56-202ENST00000415758 FAAP100Q0VG06 881 aa18.5■□□□□ 0.55
DDX56-202ENST00000415758 FAM83BQ5T0W9 1011 aa18.5■□□□□ 0.55
DDX56-202ENST00000415758 CCSAPQ6IQ19 270 aaPredicted RBP18.5■□□□□ 0.55
DDX56-202ENST00000415758 MAMDC4Q6UXC1 1216 aa18.5■□□□□ 0.55
DDX56-202ENST00000415758 KLHDC9Q8NEP7 349 aa18.5■□□□□ 0.55
DDX56-202ENST00000415758 NUP133Q8WUM0 1156 aa18.5■□□□□ 0.55
DDX56-202ENST00000415758 TMEM39AQ9NV64 488 aa18.5■□□□□ 0.55
DDX56-202ENST00000415758 SLC4A4Q9Y6R1 1079 aa18.5■□□□□ 0.55
DDX56-202ENST00000415758 SYNGAP1Q96PV0 1343 aa18.49■□□□□ 0.55
DDX56-202ENST00000415758 DNAJC25-GNG10A0A024R161 153 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms