RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 ZNF165P49910 485 aa22.98■■□□□ 1.27
AP1S3-205ENST00000415298 TBC1D16Q8TBP0 767 aa22.98■■□□□ 1.27
AP1S3-205ENST00000415298 MAGEC3Q8TD91 643 aa22.98■■□□□ 1.27
AP1S3-205ENST00000415298 MCAMP43121 646 aa22.97■■□□□ 1.27
AP1S3-205ENST00000415298 RANBP1P43487 201 aa22.97■■□□□ 1.27
AP1S3-205ENST00000415298 C6orf229H3BNL8 230 aa22.97■■□□□ 1.27
AP1S3-205ENST00000415298 CAVIN2O95810 425 aa22.97■■□□□ 1.27
AP1S3-205ENST00000415298 ZSCAN22P10073 491 aaPredicted RBP22.97■■□□□ 1.27
AP1S3-205ENST00000415298 TRIM42Q8IWZ5 723 aa22.97■■□□□ 1.27
AP1S3-205ENST00000415298 CCDC102AQ96A19 550 aa22.97■■□□□ 1.27
AP1S3-205ENST00000415298 TSGA10Q9BZW7 698 aa22.97■■□□□ 1.27
AP1S3-205ENST00000415298 RGL1Q9NZL6 768 aa22.97■■□□□ 1.27
AP1S3-205ENST00000415298 CD2APQ9Y5K6 639 aa22.97■■□□□ 1.27
AP1S3-205ENST00000415298 KIAA1551Q9HCM1 1747 aa22.96■■□□□ 1.27
AP1S3-205ENST00000415298 AHCYL1O43865 530 aa22.96■■□□□ 1.27
AP1S3-205ENST00000415298 FKBP4Q02790 459 aaKnown RBP eCLIP22.96■■□□□ 1.27
AP1S3-205ENST00000415298 GGA1Q9UJY5 639 aa22.96■■□□□ 1.27
AP1S3-205ENST00000415298 LEMD3Q9Y2U8 911 aa22.96■■□□□ 1.27
AP1S3-205ENST00000415298 IRS2Q9Y4H2 1338 aa22.96■■□□□ 1.27
AP1S3-205ENST00000415298 SHOX2O60902 331 aaPredicted RBP22.96■■□□□ 1.27
AP1S3-205ENST00000415298 GBP2P32456 591 aaPredicted RBP22.96■■□□□ 1.27
AP1S3-205ENST00000415298 TMC4Q7Z404 712 aa22.96■■□□□ 1.27
AP1S3-205ENST00000415298 MFN1Q8IWA4 741 aa22.96■■□□□ 1.27
AP1S3-205ENST00000415298 GOLGA1Q92805 767 aa22.96■■□□□ 1.27
AP1S3-205ENST00000415298 CHGBP05060 677 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 FESP07332 822 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 USP5P45974 858 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 ACTN3Q08043 901 aaPredicted RBP22.95■■□□□ 1.26
AP1S3-205ENST00000415298 USP4Q13107 963 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 IQCB1Q15051 598 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 THEMIS2Q5TEJ8 643 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 CEP57Q86XR8 500 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 YIPF2Q9BWQ6 316 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 PICK1Q9NRD5 415 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 PIM2Q9P1W9 311 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 LRRC37AA6NMS7 1700 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 SOCS7O14512 581 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 RIMBP2O15034 1052 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 ERLIN1O75477 346 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 SMTNP53814 917 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 HAUS7Q99871 368 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 L1RE1Q9UN81 338 aa22.95■■□□□ 1.26
AP1S3-205ENST00000415298 IBSPP21815 317 aaPredicted RBP22.94■■□□□ 1.26
AP1S3-205ENST00000415298 ZAP70P43403 619 aa22.94■■□□□ 1.26
AP1S3-205ENST00000415298 DPP8Q6V1X1 898 aaPredicted RBP22.94■■□□□ 1.26
AP1S3-205ENST00000415298 FAM81AQ8TBF8 368 aa22.94■■□□□ 1.26
AP1S3-205ENST00000415298 BICD1Q96G01 975 aa22.94■■□□□ 1.26
AP1S3-205ENST00000415298 FHDC1Q9C0D6 1143 aaPredicted RBP22.94■■□□□ 1.26
AP1S3-205ENST00000415298 DLEC1Q9Y238 1755 aa22.94■■□□□ 1.26
AP1S3-205ENST00000415298 MYL1P05976 194 aa22.93■■□□□ 1.26
AP1S3-205ENST00000415298 RASGRF1Q13972 1273 aa22.93■■□□□ 1.26
AP1S3-205ENST00000415298 SDR16C5Q8N3Y7 309 aa22.93■■□□□ 1.26
AP1S3-205ENST00000415298 ATL2Q8NHH9 583 aa22.93■■□□□ 1.26
AP1S3-205ENST00000415298 RSRC1Q96IZ7 334 aaKnown RBP22.93■■□□□ 1.26
AP1S3-205ENST00000415298 PHACTR2O75167 634 aa22.93■■□□□ 1.26
AP1S3-205ENST00000415298 ATP2B4P23634 1241 aa22.93■■□□□ 1.26
AP1S3-205ENST00000415298 PPP2R3AQ06190 1150 aa22.93■■□□□ 1.26
AP1S3-205ENST00000415298 VPS37DQ86XT2 251 aa22.93■■□□□ 1.26
AP1S3-205ENST00000415298 CCDC50Q8IVM0 306 aa22.93■■□□□ 1.26
AP1S3-205ENST00000415298 DBN1Q16643 649 aa22.92■■□□□ 1.26
AP1S3-205ENST00000415298 CAVIN4Q5BKX8 364 aa22.92■■□□□ 1.26
AP1S3-205ENST00000415298 TRIM65Q6PJ69 517 aa22.92■■□□□ 1.26
AP1S3-205ENST00000415298 FBXO33Q7Z6M2 555 aa22.92■■□□□ 1.26
AP1S3-205ENST00000415298 OSBPL5Q9H0X9 879 aaPredicted RBP22.92■■□□□ 1.26
AP1S3-205ENST00000415298 HMG20BQ9P0W2 317 aa22.92■■□□□ 1.26
AP1S3-205ENST00000415298 ARAP2Q8WZ64 1704 aa22.92■■□□□ 1.26
AP1S3-205ENST00000415298 GOLGA6L19H0YKK7 550 aa22.92■■□□□ 1.26
AP1S3-205ENST00000415298 LTBP1Q14766 1721 aa22.92■■□□□ 1.26
AP1S3-205ENST00000415298 AKAP11Q9UKA4 1901 aa22.92■■□□□ 1.26
AP1S3-205ENST00000415298 JAG2Q9Y219 1238 aa22.92■■□□□ 1.26
AP1S3-205ENST00000415298 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.92■■□□□ 1.26
AP1S3-205ENST00000415298 HIBADHP31937 336 aaKnown RBP22.91■■□□□ 1.26
AP1S3-205ENST00000415298 CWF19L1Q69YN2 538 aaKnown RBP22.91■■□□□ 1.26
AP1S3-205ENST00000415298 CAPRIN2Q6IMN6 1127 aaKnown RBP22.91■■□□□ 1.26
AP1S3-205ENST00000415298 SLC30A9Q6PML9 568 aa22.91■■□□□ 1.26
AP1S3-205ENST00000415298 EPAS1Q99814 870 aa22.91■■□□□ 1.26
AP1S3-205ENST00000415298 TNMDQ9H2S6 317 aa22.91■■□□□ 1.26
AP1S3-205ENST00000415298 DUOX1Q9NRD9 1551 aa22.91■■□□□ 1.26
AP1S3-205ENST00000415298 SHTN1A0MZ66 631 aa22.91■■□□□ 1.26
AP1S3-205ENST00000415298 SPDYE3A6NKU9 549 aa22.91■■□□□ 1.26
AP1S3-205ENST00000415298 NUP133Q8WUM0 1156 aa22.91■■□□□ 1.26
AP1S3-205ENST00000415298 RASSF9O75901 435 aa22.9■■□□□ 1.26
AP1S3-205ENST00000415298 KIAA0754O94854 1291 aa22.9■■□□□ 1.26
AP1S3-205ENST00000415298 CNTROBQ8N137 903 aa22.9■■□□□ 1.26
AP1S3-205ENST00000415298 PAG1Q9NWQ8 432 aa22.9■■□□□ 1.26
AP1S3-205ENST00000415298 IMPACTQ9P2X3 320 aa22.9■■□□□ 1.26
AP1S3-205ENST00000415298 MRFAP1Q9Y605 127 aa22.9■■□□□ 1.26
AP1S3-205ENST00000415298 POTEB2H3BUK9 544 aa22.9■■□□□ 1.26
AP1S3-205ENST00000415298 SNCBQ16143 134 aa22.9■■□□□ 1.26
AP1S3-205ENST00000415298 CAMK4Q16566 473 aa22.9■■□□□ 1.26
AP1S3-205ENST00000415298 CCDC181Q5TID7 509 aa22.9■■□□□ 1.26
AP1S3-205ENST00000415298 OSBPL9Q96SU4 736 aa22.9■■□□□ 1.26
AP1S3-205ENST00000415298 TMEM165Q9HC07 324 aa22.9■■□□□ 1.26
AP1S3-205ENST00000415298 BCS1LQ9Y276 419 aa22.9■■□□□ 1.26
AP1S3-205ENST00000415298 SYT1P21579 422 aa22.89■■□□□ 1.26
AP1S3-205ENST00000415298 ZBED6P86452 979 aa22.89■■□□□ 1.26
AP1S3-205ENST00000415298 CDC37Q16543 378 aaPredicted RBP22.89■■□□□ 1.26
AP1S3-205ENST00000415298 DALRD3Q5D0E6 543 aaKnown RBP22.89■■□□□ 1.26
AP1S3-205ENST00000415298 RBM43Q6ZSC3 357 aaKnown RBP22.89■■□□□ 1.26
AP1S3-205ENST00000415298 RTEL1Q9NZ71 1219 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms