RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 PGK1P00558 417 aa16.42■□□□□ 0.22
RAPGEF1-204ENST00000414781 CSF2RAP15509 400 aa16.42■□□□□ 0.22
RAPGEF1-204ENST00000414781 ADORA1P30542 326 aa16.42■□□□□ 0.22
RAPGEF1-204ENST00000414781 ACLYP53396 1101 aa16.42■□□□□ 0.22
RAPGEF1-204ENST00000414781 ZYXQ15942 572 aaKnown RBP16.42■□□□□ 0.22
RAPGEF1-204ENST00000414781 SHROOM1Q2M3G4 852 aaPredicted RBP16.42■□□□□ 0.22
RAPGEF1-204ENST00000414781 MAML3Q96JK9 1138 aa16.42■□□□□ 0.22
RAPGEF1-204ENST00000414781 SIL1Q9H173 461 aa16.42■□□□□ 0.22
RAPGEF1-204ENST00000414781 MROH8Q9H579 483 aa16.42■□□□□ 0.22
RAPGEF1-204ENST00000414781 YBX2Q9Y2T7 364 aaKnown RBP16.42■□□□□ 0.22
RAPGEF1-204ENST00000414781 APBB1O00213 710 aa16.41■□□□□ 0.22
RAPGEF1-204ENST00000414781 BAG3O95817 575 aa16.41■□□□□ 0.22
RAPGEF1-204ENST00000414781 GH2P01242 217 aa16.41■□□□□ 0.22
RAPGEF1-204ENST00000414781 HLA-DOAP06340 250 aa16.41■□□□□ 0.22
RAPGEF1-204ENST00000414781 ERCC3P19447 782 aa16.41■□□□□ 0.22
RAPGEF1-204ENST00000414781 ATP8B2P98198 1209 aa16.41■□□□□ 0.22
RAPGEF1-204ENST00000414781 SH3RF3Q8TEJ3 882 aaPredicted RBP16.41■□□□□ 0.22
RAPGEF1-204ENST00000414781 SPATC1LQ9H0A9 340 aa16.41■□□□□ 0.22
RAPGEF1-204ENST00000414781 IL23AQ9NPF7 189 aa16.41■□□□□ 0.22
RAPGEF1-204ENST00000414781 HOXC10Q9NYD6 342 aa16.41■□□□□ 0.22
RAPGEF1-204ENST00000414781 RAI14Q9P0K7 980 aa16.41■□□□□ 0.22
RAPGEF1-204ENST00000414781 CHD7Q9P2D1 2997 aa16.41■□□□□ 0.22
RAPGEF1-204ENST00000414781 ADAMTS4O75173 837 aa16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 ACRP10323 421 aa16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 AKR1A1P14550 325 aa16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 NHLH1Q02575 133 aa16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 MTX1Q13505 466 aa16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 HDAC1Q13547 482 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 CEP85Q6P2H3 762 aa16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 MB21D1Q8N884 522 aa16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 HLA-CQ95604 372 aa16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 RPAP3Q9H6T3 665 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 C1orf115Q9H7X2 142 aa16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 PCDHB15Q9Y5E8 787 aa16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 PCDHA11Q9Y5I1 949 aa16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 ELP1O95163 1332 aa16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 FLT1P17948 1338 aa16.4■□□□□ 0.22
RAPGEF1-204ENST00000414781 FGBP02675 491 aa16.39■□□□□ 0.21
RAPGEF1-204ENST00000414781 KHSRPQ92945 711 aaKnown RBP eCLIP16.39■□□□□ 0.21
RAPGEF1-204ENST00000414781 GLT1D1Q96MS3 346 aa16.39■□□□□ 0.21
RAPGEF1-204ENST00000414781 MTCH2Q9Y6C9 303 aa16.39■□□□□ 0.21
RAPGEF1-204ENST00000414781 TLR3O15455 904 aaKnown RBP16.38■□□□□ 0.21
RAPGEF1-204ENST00000414781 SRGAP3O43295 1099 aa16.38■□□□□ 0.21
RAPGEF1-204ENST00000414781 FCER1AP12319 257 aa16.38■□□□□ 0.21
RAPGEF1-204ENST00000414781 COG2Q14746 738 aa16.38■□□□□ 0.21
RAPGEF1-204ENST00000414781 MAPKAPK5Q8IW41 473 aa16.38■□□□□ 0.21
RAPGEF1-204ENST00000414781 SIPA1L1O43166 1804 aa16.38■□□□□ 0.21
RAPGEF1-204ENST00000414781 LRRC37A2A6NM11 1700 aa16.37■□□□□ 0.21
RAPGEF1-204ENST00000414781 CDK7P50613 346 aa16.37■□□□□ 0.21
RAPGEF1-204ENST00000414781 SPATA5Q8NB90 893 aa16.37■□□□□ 0.21
RAPGEF1-204ENST00000414781 TGFBRAP1Q8WUH2 860 aa16.37■□□□□ 0.21
RAPGEF1-204ENST00000414781 TINF2Q9BSI4 451 aa16.37■□□□□ 0.21
RAPGEF1-204ENST00000414781 HMG20BQ9P0W2 317 aa16.37■□□□□ 0.21
RAPGEF1-204ENST00000414781 PALD1Q9ULE6 856 aa16.37■□□□□ 0.21
RAPGEF1-204ENST00000414781 AKAP2Q9Y2D5 859 aa16.37■□□□□ 0.21
RAPGEF1-204ENST00000414781 DIS3Q9Y2L1 958 aaKnown RBP16.37■□□□□ 0.21
RAPGEF1-204ENST00000414781 PPP4CP60510 307 aa16.36■□□□□ 0.21
RAPGEF1-204ENST00000414781 RAB3GAP1Q15042 981 aa16.36■□□□□ 0.21
RAPGEF1-204ENST00000414781 CSPP1Q1MSJ5 1256 aa16.36■□□□□ 0.21
RAPGEF1-204ENST00000414781 HSP90AB4PQ58FF6 505 aa16.36■□□□□ 0.21
RAPGEF1-204ENST00000414781 TATDN1Q6P1N9 297 aa16.36■□□□□ 0.21
RAPGEF1-204ENST00000414781 NCAPG2Q86XI2 1143 aa16.36■□□□□ 0.21
RAPGEF1-204ENST00000414781 KLHDC9Q8NEP7 349 aa16.36■□□□□ 0.21
RAPGEF1-204ENST00000414781 SSH3Q8TE77 659 aa16.36■□□□□ 0.21
RAPGEF1-204ENST00000414781 XAGE2Q96GT9 111 aa16.36■□□□□ 0.21
RAPGEF1-204ENST00000414781 PPP1R12CQ9BZL4 782 aa16.36■□□□□ 0.21
RAPGEF1-204ENST00000414781 CNPY2Q9Y2B0 182 aa16.36■□□□□ 0.21
RAPGEF1-204ENST00000414781 SLC4A7Q9Y6M7 1214 aa16.36■□□□□ 0.21
RAPGEF1-204ENST00000414781 SYNRGQ9UMZ2 1314 aa16.36■□□□□ 0.21
RAPGEF1-204ENST00000414781 A0A0U1RQG5 324 aaPredicted RBP16.35■□□□□ 0.21
RAPGEF1-204ENST00000414781 A0A1B0GUL7 405 aa16.35■□□□□ 0.21
RAPGEF1-204ENST00000414781 ZNF865P0CJ78 1059 aaPredicted RBP16.35■□□□□ 0.21
RAPGEF1-204ENST00000414781 ALADP13716 330 aa16.35■□□□□ 0.21
RAPGEF1-204ENST00000414781 CST5P28325 142 aaPredicted RBP16.35■□□□□ 0.21
RAPGEF1-204ENST00000414781 TIMM10P62072 90 aa16.35■□□□□ 0.21
RAPGEF1-204ENST00000414781 KCNA10Q16322 511 aa16.35■□□□□ 0.21
RAPGEF1-204ENST00000414781 CENPQQ7L2Z9 268 aaPredicted RBP16.35■□□□□ 0.21
RAPGEF1-204ENST00000414781 PCSK9Q8NBP7 692 aaKnown RBP16.35■□□□□ 0.21
RAPGEF1-204ENST00000414781 UIMC1Q96RL1 719 aa16.35■□□□□ 0.21
RAPGEF1-204ENST00000414781 AATFQ9NY61 560 aaKnown RBP eCLIP16.35■□□□□ 0.21
RAPGEF1-204ENST00000414781 LRP2BPQ9P2M1 347 aa16.35■□□□□ 0.21
RAPGEF1-204ENST00000414781 ARVCFO00192 962 aa16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 SLC25A27O95847 323 aa16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 FOXK2Q01167 660 aa16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 POLA2Q14181 598 aa16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 CCSAPQ6IQ19 270 aaPredicted RBP16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 NAA16Q6N069 864 aaPredicted RBP16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 TBC1D9Q6ZT07 1266 aa16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 SIRT2Q8IXJ6 389 aa16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 FAM126BQ8IXS8 530 aa16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 ACER1Q8TDN7 264 aa16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 TANGO6Q9C0B7 1094 aa16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 CABP5Q9NP86 173 aa16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 COPRSQ9NQ92 184 aa16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 TRANK1O15050 2925 aa16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 PRRC2BQ5JSZ5 2229 aaKnown RBP16.34■□□□□ 0.21
RAPGEF1-204ENST00000414781 PNMA6EA0A0J9YXQ4 647 aa16.33■□□□□ 0.2
RAPGEF1-204ENST00000414781 IGSF3O75054 1194 aa16.33■□□□□ 0.2
RAPGEF1-204ENST00000414781 RABGGTBP53611 331 aa16.33■□□□□ 0.2
RAPGEF1-204ENST00000414781 PLS1Q14651 629 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms