RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 EID1Q9Y6B2 187 aa4.34□□□□□ -1.71
SF3B1-203ENST00000414174 DYTNA2CJ06 578 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 GOLGA6L22H0YM25 854 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 NPHP1O15259 732 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 HTATSF1O43719 755 aaKnown RBP4.33□□□□□ -1.72
SF3B1-203ENST00000414174 TPPPO94811 219 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 IPO7O95373 1038 aaKnown RBP4.33□□□□□ -1.72
SF3B1-203ENST00000414174 TPM2P07951 284 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 RXRBP28702 533 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 PIK3CAP42336 1068 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 FAM160A1Q05DH4 1040 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 SEPT2Q15019 361 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 BRD3Q15059 726 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 E2F5Q15329 346 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 ZNF792Q3KQV3 632 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 INO80DQ53TQ3 878 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-203ENST00000414174 SYCP2LQ5T4T6 812 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 LDLRAD1Q5T700 205 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 ZAR1Q86SH2 424 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 ARHGEF25Q86VW2 580 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 SMG8Q8ND04 991 aaKnown RBP4.33□□□□□ -1.72
SF3B1-203ENST00000414174 BSNDQ8WZ55 320 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 MAP7D2Q96T17 732 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 PDGFDQ9GZP0 370 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-203ENST00000414174 TSPY26PQ9H489 355 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 SUGCTQ9HAC7 445 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 LGR6Q9HBX8 967 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 ARNT2Q9HBZ2 717 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 CHST12Q9NRB3 414 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 PGAP2Q9UHJ9 254 aa4.33□□□□□ -1.72
SF3B1-203ENST00000414174 LOC100289279A0A1B0GTE1 492 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 A0A1W2PP55 124 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 FAM177BA6PVY3 158 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 RAPGEF3O95398 923 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 TIAF1O95411 115 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 CCDC175P0C221 793 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 ESRRAP11474 423 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-203ENST00000414174 EDN3P14138 238 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 ABCD1P33897 745 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 ADMP35318 185 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 PDE6BP35913 854 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 ZNF131P52739 623 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 CCT2P78371 535 aaKnown RBP4.32□□□□□ -1.72
SF3B1-203ENST00000414174 TMED1Q13445 227 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 NFKBIBQ15653 356 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 SPRED3Q2MJR0 410 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 PLEKHG4Q58EX7 1191 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 DUSP27Q5VZP5 1158 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 SKAP1Q86WV1 359 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 SUGP1Q8IWZ8 645 aaKnown RBP4.32□□□□□ -1.72
SF3B1-203ENST00000414174 STK11IPQ8N1F8 1099 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 MYO1HQ8N1T3 1032 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 GLIS3Q8NEA6 775 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 BCL7CQ8WUZ0 217 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-203ENST00000414174 GIMAP1Q8WWP7 306 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 SLC7A3Q8WY07 619 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 FAM168AQ92567 244 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 PMEPA1Q969W9 287 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 SERINC2Q96SA4 455 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 IWS1Q96ST2 819 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 FAM129BQ96TA1 746 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 TCF12Q99081 682 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 MAP3K14Q99558 947 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 KRTAP9-8Q9BYQ0 159 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 CAPN10Q9HC96 672 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 ZC3H7BQ9UGR2 993 aaKnown RBP4.32□□□□□ -1.72
SF3B1-203ENST00000414174 SLC5A6Q9Y289 635 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 RABGAP1Q9Y3P9 1069 aa4.32□□□□□ -1.72
SF3B1-203ENST00000414174 TMEM110-MUSTN1A8MSY1 372 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 GPR182O15218 404 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 TCEA3O75764 348 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 BPNT1O95861 308 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 KRT18P05783 430 aaKnown RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 CTSBP07858 339 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 CCDC172P0C7W6 258 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 U2AF1L5P0DN76 240 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 SRGNP10124 158 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 CFPP27918 469 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 BUD31P41223 144 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 GRIA4P48058 902 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 U2AF1Q01081 240 aaKnown RBP eCLIP4.31□□□□□ -1.724e-8■□□□□ 11
SF3B1-203ENST00000414174 CYP27A1Q02318 531 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 EHHADHQ08426 723 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 DMTNQ08495 405 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 C19orf57Q0VDD7 668 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 ORC1Q13415 861 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 ZNF394Q53GI3 561 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 FAM133BQ5BKY9 247 aaKnown RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 CCDC158Q5M9N0 1113 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 ACBD5Q5T8D3 534 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 NUTM2GQ5VZR2 741 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 CCNJLQ8IV13 435 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 BRSK2Q8IWQ3 736 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 GALNT12Q8IXK2 581 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 IFNL3Q8IZI9 196 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 ARL6IP6Q8N6S5 226 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 C12orf50Q8NA57 414 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 MYRIPQ8NFW9 859 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 ZSCAN18Q8TBC5 510 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 ATRIPQ8WXE1 791 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms