RNA–Protein interactions for RNA: ENST00000412964.6

CCDC138-203, Transcript of coiled-coil domain containing 138, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC138, Length 2,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-203ENST00000412964 SHISA4Q96DD7 197 aa16.06■□□□□ 0.16
CCDC138-203ENST00000412964 PHF20Q9BVI0 1012 aa16.06■□□□□ 0.16
CCDC138-203ENST00000412964 FOXP1Q9H334 677 aaPredicted RBP16.06■□□□□ 0.16
CCDC138-203ENST00000412964 SEC63Q9UGP8 760 aaKnown RBP16.06■□□□□ 0.16
CCDC138-203ENST00000412964 ASTN2O75129 1339 aaPredicted RBP16.05■□□□□ 0.16
CCDC138-203ENST00000412964 DICER1Q9UPY3 1922 aaKnown RBP16.05■□□□□ 0.16
CCDC138-203ENST00000412964 SBF1O95248 1867 aa16.05■□□□□ 0.16
CCDC138-203ENST00000412964 ATP2B1P20020 1258 aa16.05■□□□□ 0.16
CCDC138-203ENST00000412964 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
CCDC138-203ENST00000412964 RTEL1Q9NZ71 1219 aa16.05■□□□□ 0.16
CCDC138-203ENST00000412964 SYCE3A1L190 88 aa16.05■□□□□ 0.16
CCDC138-203ENST00000412964 MMP14P50281 582 aa16.05■□□□□ 0.16
CCDC138-203ENST00000412964 RRP1BQ14684 758 aaKnown RBP16.05■□□□□ 0.16
CCDC138-203ENST00000412964 SLC35G1Q2M3R5 365 aa16.05■□□□□ 0.16
CCDC138-203ENST00000412964 ASPRV1Q53RT3 343 aa16.05■□□□□ 0.16
CCDC138-203ENST00000412964 ANO1Q5XXA6 986 aa16.05■□□□□ 0.16
CCDC138-203ENST00000412964 RRP36Q96EU6 259 aaKnown RBP16.05■□□□□ 0.16
CCDC138-203ENST00000412964 PGBD1Q96JS3 809 aa16.05■□□□□ 0.16
CCDC138-203ENST00000412964 POLR3EQ9NVU0 708 aa16.05■□□□□ 0.16
CCDC138-203ENST00000412964 RNF181Q9P0P0 153 aa16.05■□□□□ 0.16
CCDC138-203ENST00000412964 HACL1Q9UJ83 578 aa16.05■□□□□ 0.16
CCDC138-203ENST00000412964 RCOR1Q9UKL0 485 aa16.05■□□□□ 0.16
CCDC138-203ENST00000412964 KCTD1Q719H9 257 aa16.04■□□□□ 0.16
CCDC138-203ENST00000412964 SPZ1Q9BXG8 430 aa16.04■□□□□ 0.16
CCDC138-203ENST00000412964 YBX3P16989 372 aaKnown RBP eCLIP16.03■□□□□ 0.16
CCDC138-203ENST00000412964 JAG1P78504 1218 aa16.03■□□□□ 0.16
CCDC138-203ENST00000412964 GPC2Q8N158 579 aa16.03■□□□□ 0.16
CCDC138-203ENST00000412964 LINC00301Q8NCQ3 95 aa16.03■□□□□ 0.16
CCDC138-203ENST00000412964 SLC1A4P43007 532 aa16.03■□□□□ 0.16
CCDC138-203ENST00000412964 WWC2Q6AWC2 1192 aa16.03■□□□□ 0.16
CCDC138-203ENST00000412964 KCNG4Q8TDN1 519 aa16.03■□□□□ 0.16
CCDC138-203ENST00000412964 PIGSQ96S52 555 aa16.03■□□□□ 0.16
CCDC138-203ENST00000412964 NYAP2Q9P242 653 aa16.03■□□□□ 0.16
CCDC138-203ENST00000412964 GOLGA6L3A6NEY3 463 aa16.02■□□□□ 0.16
CCDC138-203ENST00000412964 SPTLC2O15270 562 aa16.02■□□□□ 0.16
CCDC138-203ENST00000412964 YEATS4O95619 227 aa16.02■□□□□ 0.16
CCDC138-203ENST00000412964 LIG1P18858 919 aa16.02■□□□□ 0.16
CCDC138-203ENST00000412964 SLC16A2P36021 539 aa16.02■□□□□ 0.16
CCDC138-203ENST00000412964 ZNF543Q08ER8 600 aa16.02■□□□□ 0.16
CCDC138-203ENST00000412964 SNHG28P0DPA3 235 aa16.02■□□□□ 0.15
CCDC138-203ENST00000412964 MARCKSP29966 332 aaPredicted RBP16.02■□□□□ 0.15
CCDC138-203ENST00000412964 RILPL1Q5EBL4 403 aa16.02■□□□□ 0.15
CCDC138-203ENST00000412964 GPATCH4Q5T3I0 446 aaKnown RBP16.02■□□□□ 0.15
CCDC138-203ENST00000412964 SLFN13Q68D06 897 aa16.02■□□□□ 0.15
CCDC138-203ENST00000412964 TTBK2Q6IQ55 1244 aa16.02■□□□□ 0.15
CCDC138-203ENST00000412964 GPRC5DQ9NZD1 345 aa16.02■□□□□ 0.15
CCDC138-203ENST00000412964 FAM205CA6NFA0 338 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 CALML3P27482 149 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 NASPP49321 788 aaPredicted RBP16.01■□□□□ 0.15
CCDC138-203ENST00000412964 NAPAP54920 295 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 CCDC183Q5T5S1 534 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 ANGEL2Q5VTE6 544 aaKnown RBP16.01■□□□□ 0.15
CCDC138-203ENST00000412964 CCDC148Q8NFR7 591 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 DEFB129Q9H1M3 183 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.01■□□□□ 0.15
CCDC138-203ENST00000412964 ZBTB21Q9ULJ3 1066 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 PCDHA7Q9UN72 937 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 F5H6K3 240 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 DDNO94850 711 aaPredicted RBP16.01■□□□□ 0.15
CCDC138-203ENST00000412964 KLRC3Q07444 240 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 IKQ13123 557 aaPredicted RBP16.01■□□□□ 0.15
CCDC138-203ENST00000412964 TYW1BQ6NUM6 668 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 SIAH1Q8IUQ4 282 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 SPICE1Q8N0Z3 855 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 TRPM4Q8TD43 1214 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 BARHL2Q9NY43 387 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 DACT1Q9NYF0 836 aa16.01■□□□□ 0.15
CCDC138-203ENST00000412964 EPS15P42566 896 aa16■□□□□ 0.15
CCDC138-203ENST00000412964 CCAR1Q8IX12 1150 aaKnown RBP16■□□□□ 0.15
CCDC138-203ENST00000412964 MKL1Q969V6 931 aa16■□□□□ 0.15
CCDC138-203ENST00000412964 ARHGEF10LQ9HCE6 1279 aa16■□□□□ 0.15
CCDC138-203ENST00000412964 SH3GLB2Q9NR46 395 aa16■□□□□ 0.15
CCDC138-203ENST00000412964 STXBP3O00186 592 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 TBC1D12O60347 775 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 NR1I2O75469 434 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 SMARCA1P28370 1054 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 ECE1P42892 770 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 TOB1P50616 345 aaPredicted RBP15.99■□□□□ 0.15
CCDC138-203ENST00000412964 NPY5RQ15761 445 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 EARS2Q5JPH6 523 aaKnown RBP15.99■□□□□ 0.15
CCDC138-203ENST00000412964 CCDC73Q6ZRK6 1079 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 PIK3AP1Q6ZUJ8 805 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 ADGRF4Q8IZF3 695 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 BLIDQ8IZY5 108 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 NUP88Q99567 741 aaPredicted RBP15.99■□□□□ 0.15
CCDC138-203ENST00000412964 RIOX1Q9H6W3 641 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 SLC39A14Q15043 492 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 ZYXQ15942 572 aaKnown RBP15.99■□□□□ 0.15
CCDC138-203ENST00000412964 CAMK4Q16566 473 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 NOM1Q5C9Z4 860 aaKnown RBP15.99■□□□□ 0.15
CCDC138-203ENST00000412964 RASGRP4Q8TDF6 673 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 CCDC12Q8WUD4 166 aaPredicted RBP15.99■□□□□ 0.15
CCDC138-203ENST00000412964 GGA3Q9NZ52 723 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 NOL7Q9UMY1 257 aaKnown RBP15.99■□□□□ 0.15
CCDC138-203ENST00000412964 PCDHA4Q9UN74 947 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 PCDHB6Q9Y5E3 794 aa15.99■□□□□ 0.15
CCDC138-203ENST00000412964 A0A1W2PRG0 241 aa15.98■□□□□ 0.15
CCDC138-203ENST00000412964 NDUFB10O96000 172 aa15.98■□□□□ 0.15
CCDC138-203ENST00000412964 LMOD1P29536 600 aaPredicted RBP15.98■□□□□ 0.15
CCDC138-203ENST00000412964 CAP2P40123 477 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms