RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 LLPHQ9BRT6 129 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 AS3MTQ9HBK9 375 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 FOXD4L1Q9NU39 408 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 RBM28Q9NW13 759 aaKnown RBP12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 MTMR7Q9Y216 660 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 FRMPD2Q68DX3 1309 aaPredicted RBP12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 STK36Q9NRP7 1315 aa12.31□□□□□ -0.44
SMARCAL1-204ENST00000412913 CYTH3O43739 400 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 TOMM70O94826 608 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 PARP1P09874 1014 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 BACE1P56817 501 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 PPATQ06203 517 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 SPP2Q13103 211 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 PPIL2Q13356 520 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 PPP2R5BQ15173 497 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 SH3D19Q5HYK7 790 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 ERO1BQ86YB8 467 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 CMTR1Q8N1G2 835 aaKnown RBP12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 CHMP4CQ96CF2 233 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 OPTNQ96CV9 577 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 FEZ1Q99689 392 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 CPVLQ9H3G5 476 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 SH2D4AQ9H788 454 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 GOPCQ9HD26 462 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 EMILIN3Q9NT22 766 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 KCNH4Q9UQ05 1017 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 ZHX2Q9Y6X8 837 aa12.3□□□□□ -0.44
SMARCAL1-204ENST00000412913 TRIM75PA6NK02 468 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 USP17L10C9JJH3 530 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 IRF6O14896 467 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 PPFIA3O75145 1194 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 VCAM1P19320 739 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 GJB2P29033 226 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 KIF5BP33176 963 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 GPATCH4Q5T3I0 446 aaKnown RBP12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 TTBK2Q6IQ55 1244 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 KCTD1Q719H9 257 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 SPICE1Q8N0Z3 855 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 PHKBQ93100 1093 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 SHISA4Q96DD7 197 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 OTUD5Q96G74 571 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 SPZ1Q9BXG8 430 aa12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 BAZ2BQ9UIF8 2168 aaKnown RBP12.29□□□□□ -0.44
SMARCAL1-204ENST00000412913 A0A0G2JLL6 359 aaPredicted RBP12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 CCDC196A0A1B0GTZ2 297 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 KLRF2D3W0D1 207 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 WDR46O15213 610 aaKnown RBP12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 FMNL1O95466 1100 aaPredicted RBP12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 SLC1A4P43007 532 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 USP14P54578 494 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 HMGCS2P54868 508 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 MOGSQ13724 837 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 CCDC96Q2M329 555 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 FAM83BQ5T0W9 1011 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 BTNL9Q6UXG8 535 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 PRRT2Q7Z6L0 340 aaPredicted RBP12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 RASAL3Q86YV0 1011 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 C2orf69Q8N8R5 385 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 LPAR1Q92633 364 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 WNK4Q96J92 1243 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 RNF26Q9BY78 433 aaPredicted RBP12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 RIOX1Q9H6W3 641 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 GPCPD1Q9NPB8 672 aa12.28□□□□□ -0.44
SMARCAL1-204ENST00000412913 C19orf81C9J6K1 198 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 CPLX1O14810 134 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 DHX16O60231 1041 aaKnown RBP12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 CDKL5O76039 1030 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 BMP3P12645 472 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 SMARCA1P28370 1054 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 GNAQP50148 359 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 HMGN5P82970 282 aaKnown RBP12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 FSTL1Q12841 308 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 PKN1Q16512 942 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 SAPCD2Q86UD0 394 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 MTMR8Q96EF0 704 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 DDX11Q96FC9 970 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 AIFM3Q96NN9 605 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 SLC26A6Q9BXS9 759 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 SMC3Q9UQE7 1217 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 TLL2Q9Y6L7 1015 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 SMCHD1A6NHR9 2005 aa12.27□□□□□ -0.45
SMARCAL1-204ENST00000412913 TMEM232C9JQI7 657 aa12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 CXCL11O14625 94 aa12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 PRPF3O43395 683 aaKnown RBP12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 RAD21O60216 631 aa12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 PLA2G6O60733 806 aa12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 HSP90AA1P07900 732 aaKnown RBP12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 SLC16A2P36021 539 aa12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 HUNKP57058 714 aa12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 PKP1Q13835 747 aa12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 CCDC82Q8N4S0 544 aa12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 LZTS2Q9BRK4 669 aa12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 UBA5Q9GZZ9 404 aa12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 RPAP3Q9H6T3 665 aaPredicted RBP12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 FBXO28Q9NVF7 368 aa12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 ORC3Q9UBD5 711 aaPredicted RBP12.26□□□□□ -0.45
SMARCAL1-204ENST00000412913 LCTP09848 1927 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms