RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 YBX1P67809 324 aaKnown RBP4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 RPL6Q02878 288 aaKnown RBP4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 EFEMP1Q12805 493 aa4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 RNF111Q6ZNA4 994 aa4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 AGMOQ6ZNB7 445 aa4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 FAM129CQ86XR2 697 aa4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 ZSCAN29Q8IWY8 852 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 TMEFF1Q8IYR6 380 aa4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 LINC01356Q8N9X3 169 aa4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 KREMEN1Q96MU8 473 aa4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 C1orf115Q9H7X2 142 aa4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 PALD1Q9ULE6 856 aa4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 EFEMP2O95967 443 aa4.73□□□□□ -1.65
HMGB3P2-201ENST00000411913 MPOP05164 745 aa4.73□□□□□ -1.65
HMGB3P2-201ENST00000411913 PNLIPP16233 465 aa4.73□□□□□ -1.65
HMGB3P2-201ENST00000411913 KIR2DL1P43626 348 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P2-201ENST00000411913 KIR2DL2P43627 348 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P2-201ENST00000411913 LIG3P49916 1009 aa4.73□□□□□ -1.65
HMGB3P2-201ENST00000411913 FMR1Q06787 632 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGB3P2-201ENST00000411913 MAP6Q96JE9 813 aa4.73□□□□□ -1.65
HMGB3P2-201ENST00000411913 ASPNQ9BXN1 380 aa4.73□□□□□ -1.65
HMGB3P2-201ENST00000411913 CORINQ9Y5Q5 1042 aa4.73□□□□□ -1.65
HMGB3P2-201ENST00000411913 EIF4BP23588 611 aaKnown RBP4.72□□□□□ -1.65
HMGB3P2-201ENST00000411913 PDE4CQ08493 712 aa4.72□□□□□ -1.65
HMGB3P2-201ENST00000411913 LDHDQ86WU2 507 aa4.72□□□□□ -1.65
HMGB3P2-201ENST00000411913 FRMD6Q96NE9 622 aa4.72□□□□□ -1.65
HMGB3P2-201ENST00000411913 FOXP3Q9BZS1 431 aa4.72□□□□□ -1.65
HMGB3P2-201ENST00000411913 MYRFQ9Y2G1 1151 aa4.72□□□□□ -1.65
HMGB3P2-201ENST00000411913 ZNF281Q9Y2X9 895 aa4.72□□□□□ -1.65
HMGB3P2-201ENST00000411913 ARL4AP40617 200 aa4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 KCNC1P48547 511 aa4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 PCBP3P57721 371 aaKnown RBP4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 RTP1P59025 263 aa4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 TMEM62Q0P6H9 643 aa4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 NMIQ13287 307 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 RTP5Q14D33 572 aa4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 TMC6Q7Z403 805 aa4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 IGDCC3Q8IVU1 814 aa4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 SLFN12Q8IYM2 578 aa4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 USHBP1Q8N6Y0 703 aa4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 ENOX1Q8TC92 643 aaKnown RBP4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 HHIPL1Q96JK4 782 aa4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 CCDC74BQ96LY2 380 aa4.71□□□□□ -1.66
HMGB3P2-201ENST00000411913 K7ESM1 405 aa4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 PRICKLE3O43900 615 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 FKTNO75072 461 aa4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 BPNT1O95861 308 aa4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 TFE3P19532 575 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 ERVFRD-1P60508 538 aa4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 RAB3GAP1Q15042 981 aa4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 TMEM201Q5SNT2 666 aa4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 UBXN11Q5T124 520 aa4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 HHIPL2Q6UWX4 724 aa4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 SYTL5Q8TDW5 730 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 PLCD4Q9BRC7 762 aa4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 KRTAP9-8Q9BYQ0 159 aa4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 KLHL3Q9UH77 587 aa4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 TCFL5Q9UL49 500 aa4.7□□□□□ -1.66
HMGB3P2-201ENST00000411913 NUDT19A8MXV4 375 aa4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 BUB1BO60566 1050 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 GBP1P32455 592 aa4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 NCKAP1LP55160 1127 aa4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 ZNF827Q17R98 1081 aa4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 GALNT18Q6P9A2 607 aa4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 PHACTR4Q8IZ21 702 aa4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 NLGN1Q8N2Q7 840 aa4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 TP53I13Q8NBR0 393 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 RETREG2Q8NC44 543 aa4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 DAGLBQ8NCG7 672 aa4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 TCTN2Q96GX1 697 aa4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 USP40Q9NVE5 1235 aa4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 KLHL14Q9P2G3 628 aa4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 TAF6LQ9Y6J9 622 aa4.69□□□□□ -1.66
HMGB3P2-201ENST00000411913 CHURC1-FNTBB4DL54 471 aa4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 SUV39H1O43463 412 aa4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 LDHBP07195 334 aaKnown RBP4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 SYPP08247 313 aa4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 RLBP1P12271 317 aa4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 LAPTM5Q13571 262 aa4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 ZPBP2Q6X784 338 aa4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 ZNF655Q8N720 491 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 ASB16Q96NS5 453 aa4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 KIF2CQ99661 725 aa4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 HDAC8Q9BY41 377 aa4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 CNOT11Q9UKZ1 510 aaKnown RBP4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 TLR6Q9Y2C9 796 aa4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 PCDHA5Q9Y5H7 936 aa4.68□□□□□ -1.66
HMGB3P2-201ENST00000411913 TMEM82A0PJX8 343 aa4.67□□□□□ -1.66
HMGB3P2-201ENST00000411913 WTIPA6NIX2 430 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P2-201ENST00000411913 FFAR3O14843 346 aa4.67□□□□□ -1.66
HMGB3P2-201ENST00000411913 AKAP8O43823 692 aaKnown RBP4.67□□□□□ -1.66
HMGB3P2-201ENST00000411913 GNA15P30679 374 aa4.67□□□□□ -1.66
HMGB3P2-201ENST00000411913 SLURP1P55000 103 aa4.67□□□□□ -1.66
HMGB3P2-201ENST00000411913 KIR3DS1Q14943 382 aa4.67□□□□□ -1.66
HMGB3P2-201ENST00000411913 ZFYVE27Q5T4F4 411 aa4.67□□□□□ -1.66
HMGB3P2-201ENST00000411913 LINC00116Q8NCU8 138 aa4.67□□□□□ -1.66
HMGB3P2-201ENST00000411913 TNFRSF10DQ9UBN6 386 aa4.67□□□□□ -1.66
HMGB3P2-201ENST00000411913 REV1Q9UBZ9 1251 aa4.67□□□□□ -1.66
HMGB3P2-201ENST00000411913 GNEQ9Y223 722 aaKnown RBP4.67□□□□□ -1.66
HMGB3P2-201ENST00000411913 P4HBP07237 508 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms