RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 ZNF543Q08ER8 600 aa21.72■■□□□ 1.07
CDC42-204ENST00000411827 PABPC4Q13310 644 aaKnown RBP eCLIP21.72■■□□□ 1.07
CDC42-204ENST00000411827 CHURC1Q8WUH1 139 aa21.72■■□□□ 1.07
CDC42-204ENST00000411827 WNK4Q96J92 1243 aa21.72■■□□□ 1.07
CDC42-204ENST00000411827 ABT1Q9ULW3 272 aaKnown RBP21.72■■□□□ 1.07
CDC42-204ENST00000411827 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.72■■□□□ 1.07
CDC42-204ENST00000411827 MYH4Q9Y623 1939 aa21.71■■□□□ 1.07
CDC42-204ENST00000411827 A0A0G2JLL6 359 aaPredicted RBP21.71■■□□□ 1.07
CDC42-204ENST00000411827 IRF6O14896 467 aa21.71■■□□□ 1.07
CDC42-204ENST00000411827 CETPP11597 493 aa21.71■■□□□ 1.07
CDC42-204ENST00000411827 ZNF157P51786 506 aaPredicted RBP21.71■■□□□ 1.07
CDC42-204ENST00000411827 INHBEP58166 350 aa21.71■■□□□ 1.07
CDC42-204ENST00000411827 HTRA3P83110 453 aa21.71■■□□□ 1.07
CDC42-204ENST00000411827 CUL4AQ13619 759 aa21.71■■□□□ 1.07
CDC42-204ENST00000411827 SPRYD7Q5W111 196 aa21.71■■□□□ 1.07
CDC42-204ENST00000411827 PRRT2Q7Z6L0 340 aaPredicted RBP21.71■■□□□ 1.07
CDC42-204ENST00000411827 FAM160B2Q86V87 743 aa21.71■■□□□ 1.07
CDC42-204ENST00000411827 FDX1P10109 184 aa21.7■■□□□ 1.06
CDC42-204ENST00000411827 NOL8Q76FK4 1167 aaKnown RBP21.7■■□□□ 1.06
CDC42-204ENST00000411827 EMILIN3Q9NT22 766 aa21.7■■□□□ 1.06
CDC42-204ENST00000411827 FEM1BQ9UK73 627 aa21.7■■□□□ 1.06
CDC42-204ENST00000411827 KIF3AQ9Y496 699 aa21.7■■□□□ 1.06
CDC42-204ENST00000411827 KLRF2D3W0D1 207 aa21.69■■□□□ 1.06
CDC42-204ENST00000411827 IFNAR1P17181 557 aa21.69■■□□□ 1.06
CDC42-204ENST00000411827 HMGCS2P54868 508 aa21.69■■□□□ 1.06
CDC42-204ENST00000411827 TRAF1Q13077 416 aa21.69■■□□□ 1.06
CDC42-204ENST00000411827 CCDC96Q2M329 555 aa21.69■■□□□ 1.06
CDC42-204ENST00000411827 BTNL9Q6UXG8 535 aa21.69■■□□□ 1.06
CDC42-204ENST00000411827 REM2Q8IYK8 340 aaPredicted RBP21.69■■□□□ 1.06
CDC42-204ENST00000411827 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.69■■□□□ 1.06
CDC42-204ENST00000411827 MAD2L2Q9UI95 211 aa21.69■■□□□ 1.06
CDC42-204ENST00000411827 PNMA2Q9UL42 364 aa21.69■■□□□ 1.06
CDC42-204ENST00000411827 MANSC4A6NHS7 340 aaPredicted RBP21.68■■□□□ 1.06
CDC42-204ENST00000411827 RAD21O60216 631 aa21.68■■□□□ 1.06
CDC42-204ENST00000411827 HSP90AA1P07900 732 aaKnown RBP21.68■■□□□ 1.06
CDC42-204ENST00000411827 PDIA4P13667 645 aaKnown RBP21.68■■□□□ 1.06
CDC42-204ENST00000411827 HMGN5P82970 282 aaKnown RBP21.68■■□□□ 1.06
CDC42-204ENST00000411827 SCRN1Q12765 414 aa21.68■■□□□ 1.06
CDC42-204ENST00000411827 TMTC3Q6ZXV5 915 aa21.68■■□□□ 1.06
CDC42-204ENST00000411827 CCDC84Q86UT8 332 aaPredicted RBP21.68■■□□□ 1.06
CDC42-204ENST00000411827 TRIM22Q8IYM9 498 aa21.68■■□□□ 1.06
CDC42-204ENST00000411827 LARP6Q9BRS8 491 aaKnown RBP21.68■■□□□ 1.06
CDC42-204ENST00000411827 MYL10Q9BUA6 226 aa21.68■■□□□ 1.06
CDC42-204ENST00000411827 SPZ1Q9BXG8 430 aa21.68■■□□□ 1.06
CDC42-204ENST00000411827 ZCCHC17Q9NP64 241 aaKnown RBP21.68■■□□□ 1.06
CDC42-204ENST00000411827 SLC45A1Q9Y2W3 748 aa21.68■■□□□ 1.06
CDC42-204ENST00000411827 MYPNQ86TC9 1320 aa21.68■■□□□ 1.06
CDC42-204ENST00000411827 PHIPQ8WWQ0 1821 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 RASSF10A6NK89 507 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 USP17L15C9J2P7 530 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 USP17L13C9JLJ4 530 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 USP17L11C9JVI0 530 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 USP17L18D6R9N7 530 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 USP17L22D6RA61 530 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 USP17L17D6RBQ6 530 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 USP17L19D6RCP7 530 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 USP17L20D6RJB6 530 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 SLC10A3P09131 477 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 VCAM1P19320 739 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 HOXA7P31268 230 aaPredicted RBP21.67■■□□□ 1.06
CDC42-204ENST00000411827 STAT2P52630 851 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 CCT2P78371 535 aaKnown RBP21.67■■□□□ 1.06
CDC42-204ENST00000411827 USP17L24Q0WX57 530 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 STK3Q13188 491 aa21.67■■□□□ 1.06
CDC42-204ENST00000411827 FAM217BQ9NTX9 383 aaPredicted RBP21.67■■□□□ 1.06
CDC42-204ENST00000411827 AKAP17AQ02040 695 aaKnown RBP21.66■■□□□ 1.06
CDC42-204ENST00000411827 ZYXQ15942 572 aaKnown RBP21.66■■□□□ 1.06
CDC42-204ENST00000411827 RASAL3Q86YV0 1011 aa21.66■■□□□ 1.06
CDC42-204ENST00000411827 SPICE1Q8N0Z3 855 aa21.66■■□□□ 1.06
CDC42-204ENST00000411827 FAM177A1Q8N128 213 aaPredicted RBP21.66■■□□□ 1.06
CDC42-204ENST00000411827 PRPF38AQ8NAV1 312 aaKnown RBP21.66■■□□□ 1.06
CDC42-204ENST00000411827 CNKSR2Q8WXI2 1034 aa21.66■■□□□ 1.06
CDC42-204ENST00000411827 WASF1Q92558 559 aa21.66■■□□□ 1.06
CDC42-204ENST00000411827 RNF26Q9BY78 433 aaPredicted RBP21.66■■□□□ 1.06
CDC42-204ENST00000411827 HOXC10Q9NYD6 342 aa21.66■■□□□ 1.06
CDC42-204ENST00000411827 AGTPBP1Q9UPW5 1226 aa21.66■■□□□ 1.06
CDC42-204ENST00000411827 STK36Q9NRP7 1315 aa21.65■■□□□ 1.06
CDC42-204ENST00000411827 TESPA1A2RU30 521 aaPredicted RBP21.65■■□□□ 1.06
CDC42-204ENST00000411827 LARGE1O95461 756 aa21.65■■□□□ 1.06
CDC42-204ENST00000411827 CDC27P30260 824 aa21.65■■□□□ 1.06
CDC42-204ENST00000411827 ADD1P35611 737 aaKnown RBP21.65■■□□□ 1.06
CDC42-204ENST00000411827 FAM83BQ5T0W9 1011 aa21.65■■□□□ 1.06
CDC42-204ENST00000411827 CCDC83Q8IWF9 413 aa21.65■■□□□ 1.06
CDC42-204ENST00000411827 NECAB1Q8N987 351 aa21.65■■□□□ 1.06
CDC42-204ENST00000411827 RGS22Q8NE09 1264 aa21.65■■□□□ 1.06
CDC42-204ENST00000411827 MS4A4AQ96JQ5 239 aa21.65■■□□□ 1.06
CDC42-204ENST00000411827 RIOX1Q9H6W3 641 aa21.65■■□□□ 1.06
CDC42-204ENST00000411827 PNMA3Q9UL41 463 aa21.65■■□□□ 1.06
CDC42-204ENST00000411827 ISY1Q9ULR0 285 aaKnown RBP21.65■■□□□ 1.06
CDC42-204ENST00000411827 MTMR7Q9Y216 660 aa21.65■■□□□ 1.06
CDC42-204ENST00000411827 TMEM232C9JQI7 657 aa21.64■■□□□ 1.05
CDC42-204ENST00000411827 RXRAP19793 462 aa21.64■■□□□ 1.05
CDC42-204ENST00000411827 GJA5P36382 358 aa21.64■■□□□ 1.05
CDC42-204ENST00000411827 SSRP1Q08945 709 aaKnown RBP21.64■■□□□ 1.05
CDC42-204ENST00000411827 SREBF2Q12772 1141 aa21.64■■□□□ 1.05
CDC42-204ENST00000411827 IKQ13123 557 aaPredicted RBP21.64■■□□□ 1.05
CDC42-204ENST00000411827 NOGQ13253 232 aa21.64■■□□□ 1.05
CDC42-204ENST00000411827 NTRK3Q16288 839 aa21.64■■□□□ 1.05
CDC42-204ENST00000411827 DEFB115Q30KQ5 88 aa21.64■■□□□ 1.05
CDC42-204ENST00000411827 CCDC144CPQ8IYA2 1237 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms