RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ATP5JP18859 108 aa20.11■□□□□ 0.81
MRPL55-220ENST00000411464 KCTD2Q14681 263 aa20.11■□□□□ 0.81
MRPL55-220ENST00000411464 SNX17Q15036 470 aa20.11■□□□□ 0.81
MRPL55-220ENST00000411464 BADQ92934 168 aa20.11■□□□□ 0.81
MRPL55-220ENST00000411464 GOPCQ9HD26 462 aa20.11■□□□□ 0.81
MRPL55-220ENST00000411464 NRBP1Q9UHY1 535 aa20.11■□□□□ 0.81
MRPL55-220ENST00000411464 ADAMTS5Q9UNA0 930 aa20.11■□□□□ 0.81
MRPL55-220ENST00000411464 RARBP10826 455 aa20.1■□□□□ 0.81
MRPL55-220ENST00000411464 UBE3CQ15386 1083 aa20.1■□□□□ 0.81
MRPL55-220ENST00000411464 FAM47AQ5JRC9 791 aa20.1■□□□□ 0.81
MRPL55-220ENST00000411464 C1orf53Q5VUE5 145 aa20.1■□□□□ 0.81
MRPL55-220ENST00000411464 C16orf86Q6ZW13 317 aa20.1■□□□□ 0.81
MRPL55-220ENST00000411464 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.1■□□□□ 0.81
MRPL55-220ENST00000411464 SIRT2Q8IXJ6 389 aa20.1■□□□□ 0.81
MRPL55-220ENST00000411464 HAUS7Q99871 368 aa20.1■□□□□ 0.81
MRPL55-220ENST00000411464 XPNPEP3Q9NQH7 507 aa20.1■□□□□ 0.81
MRPL55-220ENST00000411464 ZBTB40Q9NUA8 1239 aa20.1■□□□□ 0.81
MRPL55-220ENST00000411464 DDX19BQ9UMR2 479 aa20.1■□□□□ 0.81
MRPL55-220ENST00000411464 SLC4A4Q9Y6R1 1079 aa20.1■□□□□ 0.81
MRPL55-220ENST00000411464 PGK2P07205 417 aa20.09■□□□□ 0.81
MRPL55-220ENST00000411464 STAT3P40763 770 aa20.09■□□□□ 0.81
MRPL55-220ENST00000411464 ZSCAN25Q6NSZ9 544 aa20.09■□□□□ 0.81
MRPL55-220ENST00000411464 RNF180Q86T96 592 aa20.09■□□□□ 0.81
MRPL55-220ENST00000411464 RIOX2Q8IUF8 465 aa20.09■□□□□ 0.81
MRPL55-220ENST00000411464 CHMP4BQ9H444 224 aaKnown RBP20.09■□□□□ 0.81
MRPL55-220ENST00000411464 DIS3Q9Y2L1 958 aaKnown RBP20.09■□□□□ 0.81
MRPL55-220ENST00000411464 SMIM22K7EJ46 135 aa20.08■□□□□ 0.81
MRPL55-220ENST00000411464 VWA5AO00534 786 aa20.08■□□□□ 0.81
MRPL55-220ENST00000411464 COPB2P35606 906 aa20.08■□□□□ 0.81
MRPL55-220ENST00000411464 TLE2Q04725 743 aa20.08■□□□□ 0.81
MRPL55-220ENST00000411464 C9orf50Q5SZB4 431 aa20.08■□□□□ 0.81
MRPL55-220ENST00000411464 SH3RF1Q7Z6J0 888 aa20.08■□□□□ 0.81
MRPL55-220ENST00000411464 TINF2Q9BSI4 451 aa20.08■□□□□ 0.81
MRPL55-220ENST00000411464 PDLIM7Q9NR12 457 aa20.08■□□□□ 0.81
MRPL55-220ENST00000411464 FBXO28Q9NVF7 368 aa20.08■□□□□ 0.81
MRPL55-220ENST00000411464 PPP1R9AQ9ULJ8 1098 aa20.08■□□□□ 0.81
MRPL55-220ENST00000411464 PHF24Q9UPV7 400 aa20.08■□□□□ 0.81
MRPL55-220ENST00000411464 COG6Q9Y2V7 657 aa20.08■□□□□ 0.81
MRPL55-220ENST00000411464 TACC3Q9Y6A5 838 aa20.08■□□□□ 0.81
MRPL55-220ENST00000411464 TRIM43BA6NCK2 446 aa20.07■□□□□ 0.8
MRPL55-220ENST00000411464 CTR9Q6PD62 1173 aa20.07■□□□□ 0.8
MRPL55-220ENST00000411464 MIER1Q8N108 512 aa20.07■□□□□ 0.8
MRPL55-220ENST00000411464 TRIM43Q96BQ3 446 aaPredicted RBP20.07■□□□□ 0.8
MRPL55-220ENST00000411464 PGK1P00558 417 aa20.06■□□□□ 0.8
MRPL55-220ENST00000411464 ZNF792Q3KQV3 632 aa20.06■□□□□ 0.8
MRPL55-220ENST00000411464 FAM83BQ5T0W9 1011 aa20.06■□□□□ 0.8
MRPL55-220ENST00000411464 SEMA6BQ9H3T3 888 aa20.06■□□□□ 0.8
MRPL55-220ENST00000411464 CNPY2Q9Y2B0 182 aa20.06■□□□□ 0.8
MRPL55-220ENST00000411464 ZNF236Q9UL36 1845 aa20.06■□□□□ 0.8
MRPL55-220ENST00000411464 ZBED9Q6R2W3 1325 aa20.05■□□□□ 0.8
MRPL55-220ENST00000411464 NAV1Q8NEY1 1877 aa20.05■□□□□ 0.8
MRPL55-220ENST00000411464 CHGBP05060 677 aa20.05■□□□□ 0.8
MRPL55-220ENST00000411464 AKR1A1P14550 325 aa20.05■□□□□ 0.8
MRPL55-220ENST00000411464 TAL1P17542 331 aaPredicted RBP20.05■□□□□ 0.8
MRPL55-220ENST00000411464 SMAD3P84022 425 aaKnown RBP20.05■□□□□ 0.8
MRPL55-220ENST00000411464 CDX2Q99626 313 aaPredicted RBP20.05■□□□□ 0.8
MRPL55-220ENST00000411464 COL25A1Q9BXS0 654 aaPredicted RBP20.05■□□□□ 0.8
MRPL55-220ENST00000411464 PUS7LQ9H0K6 701 aaKnown RBP20.05■□□□□ 0.8
MRPL55-220ENST00000411464 ZNF214Q9UL59 606 aaPredicted RBP20.05■□□□□ 0.8
MRPL55-220ENST00000411464 CLTBP09497 229 aa20.04■□□□□ 0.8
MRPL55-220ENST00000411464 MKNK2Q9HBH9 465 aa20.04■□□□□ 0.8
MRPL55-220ENST00000411464 ARPP21Q9UBL0 812 aaPredicted RBP20.04■□□□□ 0.8
MRPL55-220ENST00000411464 CUL9Q8IWT3 2517 aa20.04■□□□□ 0.8
MRPL55-220ENST00000411464 A0A1W2PQ45 241 aaPredicted RBP20.03■□□□□ 0.8
MRPL55-220ENST00000411464 A0A1W2PQY0 241 aa20.03■□□□□ 0.8
MRPL55-220ENST00000411464 PQBP1O60828 265 aaKnown RBP20.03■□□□□ 0.8
MRPL55-220ENST00000411464 ZNF865P0CJ78 1059 aaPredicted RBP20.03■□□□□ 0.8
MRPL55-220ENST00000411464 RAG1P15918 1043 aa20.03■□□□□ 0.8
MRPL55-220ENST00000411464 DDX11Q96FC9 970 aa20.03■□□□□ 0.8
MRPL55-220ENST00000411464 SLF1Q9BQI6 1058 aa20.03■□□□□ 0.8
MRPL55-220ENST00000411464 TEX13BQ9BXU2 312 aa20.03■□□□□ 0.8
MRPL55-220ENST00000411464 LRRCC1Q9C099 1032 aa20.03■□□□□ 0.8
MRPL55-220ENST00000411464 UNC80Q8N2C7 3258 aa20.03■□□□□ 0.8
MRPL55-220ENST00000411464 FRMPD3Q5JV73 1810 aa20.02■□□□□ 0.8
MRPL55-220ENST00000411464 MSL3Q8N5Y2 521 aaKnown RBP20.02■□□□□ 0.8
MRPL55-220ENST00000411464 REPS2Q8NFH8 660 aa20.02■□□□□ 0.8
MRPL55-220ENST00000411464 NUP133Q8WUM0 1156 aa20.02■□□□□ 0.8
MRPL55-220ENST00000411464 TSEN34Q9BSV6 310 aaKnown RBP20.02■□□□□ 0.8
MRPL55-220ENST00000411464 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.02■□□□□ 0.8
MRPL55-220ENST00000411464 TMEM39AQ9NV64 488 aa20.02■□□□□ 0.8
MRPL55-220ENST00000411464 KIAA0355O15063 1070 aa20.01■□□□□ 0.79
MRPL55-220ENST00000411464 ITGB8P26012 769 aa20.01■□□□□ 0.79
MRPL55-220ENST00000411464 SLC4A3P48751 1232 aa20.01■□□□□ 0.79
MRPL55-220ENST00000411464 SNRNP48Q6IEG0 339 aaKnown RBP20.01■□□□□ 0.79
MRPL55-220ENST00000411464 STK11IPQ8N1F8 1099 aa20.01■□□□□ 0.79
MRPL55-220ENST00000411464 PRPF38AQ8NAV1 312 aaKnown RBP20.01■□□□□ 0.79
MRPL55-220ENST00000411464 MAFAQ8NHW3 353 aaPredicted RBP20.01■□□□□ 0.79
MRPL55-220ENST00000411464 RNPC3Q96LT9 517 aaKnown RBP20.01■□□□□ 0.79
MRPL55-220ENST00000411464 STRBPQ96SI9 672 aaKnown RBP20.01■□□□□ 0.79
MRPL55-220ENST00000411464 NUP88Q99567 741 aaPredicted RBP20.01■□□□□ 0.79
MRPL55-220ENST00000411464 NYAP2Q9P242 653 aa20.01■□□□□ 0.79
MRPL55-220ENST00000411464 FAM184BQ9ULE4 1060 aa20.01■□□□□ 0.79
MRPL55-220ENST00000411464 CTDP1Q9Y5B0 961 aaPredicted RBP20.01■□□□□ 0.79
MRPL55-220ENST00000411464 A0A0G2JMZ2 1700 aa20.01■□□□□ 0.79
MRPL55-220ENST00000411464 RLFQ13129 1914 aa20■□□□□ 0.79
MRPL55-220ENST00000411464 DCDC2CA8MYV0 355 aa20■□□□□ 0.79
MRPL55-220ENST00000411464 MINDY4BA8MYZ0 360 aa20■□□□□ 0.79
MRPL55-220ENST00000411464 F5H6K3 240 aa20■□□□□ 0.79
MRPL55-220ENST00000411464 RASA1P20936 1047 aa20■□□□□ 0.79
MRPL55-220ENST00000411464 ACLYP53396 1101 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms