RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 MIER3Q7Z3K6 550 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 EFCC1Q9HA90 598 aa12.38□□□□□ -0.43
PRPF40A-202ENST00000410080 FLOT1O75955 427 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 CAPN12Q6ZSI9 719 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 TRAPPC8Q9Y2L5 1435 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 TBC1D10BQ4KMP7 808 aaPredicted RBP12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 DENND2CQ68D51 928 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 TAB3Q8N5C8 712 aaPredicted RBP12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 CSGALNACT2Q8N6G5 542 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 RMDN2Q96LZ7 410 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 ORAI2Q96SN7 254 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 PPP1R16BQ96T49 567 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 VPS37BQ9H9H4 285 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 ZMYM3Q14202 1370 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 DTNBO60941 627 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 MMEL1Q495T6 779 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 G2E3Q7L622 706 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 TEKT1Q969V4 418 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 ELP1O95163 1332 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 EBAG9O00559 213 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 GBP6Q6ZN66 633 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 C2CD5Q86YS7 1000 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 XAGE2Q96GT9 111 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 MTRQ99707 1265 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 RABEP2Q9H5N1 569 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 A1BGP04217 495 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 TYRO3Q06418 890 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 BRD3Q15059 726 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 KDRP35968 1356 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 PRDM1O75626 825 aa12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 RSRC2Q7L4I2 434 aaKnown RBP12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 V9GY48 417 aaPredicted RBP12.37□□□□□ -0.43
PRPF40A-202ENST00000410080 UGGT2Q9NYU1 1516 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 PARP2Q9UGN5 583 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 PTPROQ16827 1216 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 IP6K1Q92551 441 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.434e-6■■□□□ 14.2
PRPF40A-202ENST00000410080 BUB1BO60566 1050 aaPredicted RBP12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 C8orf74Q6P047 294 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 LINS1Q8NG48 757 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 PNMA2Q9UL42 364 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 CCPG1Q9ULG6 757 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 PCDHB13Q9Y5F0 798 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 NVLO15381 856 aaKnown RBP12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 ZNF853P0CG23 659 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 OSBPP22059 807 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 IQCB1Q15051 598 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 UBN2Q6ZU65 1347 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 HNRNPCL2B2RXH8 293 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 HNRNPCL1O60812 293 aaKnown RBP12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 SMIM24O75264 130 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 KRT222Q8N1A0 295 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 SPDL1Q96EA4 605 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 MYH10P35580 1976 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 TTC41PQ6P2S7 1318 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 PPFIA2O75334 1257 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 ZSCAN20P17040 1043 aaPredicted RBP12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 FAM47AQ5JRC9 791 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 CCDC186Q7Z3E2 898 aa12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 KDM5AP29375 1690 aaKnown RBP12.36□□□□□ -0.43
PRPF40A-202ENST00000410080 PDE8AO60658 829 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 DCAF15Q66K64 600 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 CDC26Q8NHZ8 85 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 LGR6Q9HBX8 967 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 IFNB1P01574 187 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 COG7P83436 770 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 ZNF790Q6PG37 636 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 KIAA0825Q8IV33 1275 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 HAUS1Q96CS2 278 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 GOLGA8CPA6NN73 597 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 K7ENM7 598 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 MFSD14BQ5SR56 506 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 BRAPQ7Z569 592 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 METTL23Q86XA0 190 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 KLHL7Q8IXQ5 586 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 ARHGAP45Q92619 1136 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 PHKBQ93100 1093 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 MYL10Q9BUA6 226 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 SLC8A2Q9UPR5 921 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 THRAP3Q9Y2W1 955 aaKnown RBP12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 NUB1Q9Y5A7 615 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 SYT10Q6XYQ8 523 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 NLRP7Q8WX94 980 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 RSRC1Q96IZ7 334 aaKnown RBP12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 GLT8D2Q9H1C3 349 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 DDX21Q9NR30 783 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 A6NJR5 290 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 MX2P20592 715 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 ABCB4P21439 1286 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 XKR9Q5GH70 373 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 ZNF18P17022 549 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 CYP26C1Q6V0L0 522 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 DHX32Q7L7V1 743 aaKnown RBP12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 IGSF22Q8N9C0 903 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 PRAG1Q86YV5 1406 aa12.35□□□□□ -0.43
PRPF40A-202ENST00000410080 DEXIO95424 95 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms