RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 FANCBQ8NB91 859 aa17.77■□□□□ 0.44
LSM5-207ENST00000410044 ZCCHC17Q9NP64 241 aaKnown RBP17.77■□□□□ 0.44
LSM5-207ENST00000410044 SLC45A1Q9Y2W3 748 aa17.77■□□□□ 0.44
LSM5-207ENST00000410044 CCL15-CCL14A0A0B4J2E2 113 aa17.76■□□□□ 0.43
LSM5-207ENST00000410044 CD2BP2O95400 341 aaKnown RBP17.76■□□□□ 0.43
LSM5-207ENST00000410044 DGKZQ13574 1117 aa17.76■□□□□ 0.43
LSM5-207ENST00000410044 CCL15Q16663 113 aa17.76■□□□□ 0.43
LSM5-207ENST00000410044 CATSPERGQ6ZRH7 1159 aa17.76■□□□□ 0.43
LSM5-207ENST00000410044 ANKRD23Q86SG2 305 aa17.76■□□□□ 0.43
LSM5-207ENST00000410044 SPICE1Q8N0Z3 855 aa17.76■□□□□ 0.43
LSM5-207ENST00000410044 BRI3BPQ8WY22 251 aa17.76■□□□□ 0.43
LSM5-207ENST00000410044 FAM217BQ9NTX9 383 aaPredicted RBP17.76■□□□□ 0.43
LSM5-207ENST00000410044 MAD2L2Q9UI95 211 aa17.76■□□□□ 0.43
LSM5-207ENST00000410044 AGTPBP1Q9UPW5 1226 aa17.76■□□□□ 0.43
LSM5-207ENST00000410044 WDR33Q9C0J8 1336 aaKnown RBP17.75■□□□□ 0.43
LSM5-207ENST00000410044 USP17L15C9J2P7 530 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 USP17L13C9JLJ4 530 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 USP17L11C9JVI0 530 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 USP17L18D6R9N7 530 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 USP17L22D6RA61 530 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 USP17L17D6RBQ6 530 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 USP17L19D6RCP7 530 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 USP17L20D6RJB6 530 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 PFKFB2O60825 505 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 PARP1P09874 1014 aaKnown RBP17.75■□□□□ 0.43
LSM5-207ENST00000410044 KIF5BP33176 963 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 MAP2K2P36507 400 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 USP17L24Q0WX57 530 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 MKRN3Q13064 507 aaKnown RBP17.75■□□□□ 0.43
LSM5-207ENST00000410044 ME3Q16798 604 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 CTCFLQ8NI51 663 aaPredicted RBP17.75■□□□□ 0.43
LSM5-207ENST00000410044 NUP133Q8WUM0 1156 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 PTPN18Q99952 460 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 LARP6Q9BRS8 491 aaKnown RBP17.75■□□□□ 0.43
LSM5-207ENST00000410044 MYL10Q9BUA6 226 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 SH2B1Q9NRF2 756 aaPredicted RBP17.75■□□□□ 0.43
LSM5-207ENST00000410044 RBM28Q9NW13 759 aaKnown RBP17.75■□□□□ 0.43
LSM5-207ENST00000410044 FEM1BQ9UK73 627 aa17.75■□□□□ 0.43
LSM5-207ENST00000410044 RLFQ13129 1914 aa17.74■□□□□ 0.43
LSM5-207ENST00000410044 VEGFBP49765 207 aa17.74■□□□□ 0.43
LSM5-207ENST00000410044 GNAQP50148 359 aa17.74■□□□□ 0.43
LSM5-207ENST00000410044 KIF23Q02241 960 aaPredicted RBP17.74■□□□□ 0.43
LSM5-207ENST00000410044 SREBF2Q12772 1141 aa17.74■□□□□ 0.43
LSM5-207ENST00000410044 PABPC4Q13310 644 aaKnown RBP eCLIP17.74■□□□□ 0.437e-10■□□□□ 11.1
LSM5-207ENST00000410044 FAM83BQ5T0W9 1011 aa17.74■□□□□ 0.43
LSM5-207ENST00000410044 TREML2Q5T2D2 321 aa17.74■□□□□ 0.43
LSM5-207ENST00000410044 GADL1Q6ZQY3 521 aa17.74■□□□□ 0.43
LSM5-207ENST00000410044 STAG2Q8N3U4 1231 aa17.74■□□□□ 0.43
LSM5-207ENST00000410044 CHURC1Q8WUH1 139 aa17.74■□□□□ 0.43
LSM5-207ENST00000410044 LZTS2Q9BRK4 669 aa17.74■□□□□ 0.43
LSM5-207ENST00000410044 RPAP3Q9H6T3 665 aaPredicted RBP17.74■□□□□ 0.43
LSM5-207ENST00000410044 PARP14Q460N5 1801 aa17.74■□□□□ 0.43
LSM5-207ENST00000410044 MYPNQ86TC9 1320 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 CCDC196A0A1B0GTZ2 297 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 GOLGA8BA8MQT2 603 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 BTBD19C9JJ37 291 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 KLRF2D3W0D1 207 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 CDC27P30260 824 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 METAP2P50579 478 aaKnown RBP eCLIP17.73■□□□□ 0.43
LSM5-207ENST00000410044 HTRA3P83110 453 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 RTN1Q16799 776 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 KCTD1Q719H9 257 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 RASGRP2Q7LDG7 609 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 FAM160B2Q86V87 743 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 MICU3Q86XE3 530 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 CHMP4CQ96CF2 233 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 ZIC5Q96T25 663 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 NUP88Q99567 741 aaPredicted RBP17.73■□□□□ 0.43
LSM5-207ENST00000410044 SLKQ9H2G2 1235 aaPredicted RBP17.73■□□□□ 0.43
LSM5-207ENST00000410044 ADAMTS5Q9UNA0 930 aa17.73■□□□□ 0.43
LSM5-207ENST00000410044 GOLGA8AA7E2F4 631 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 TMEM232C9JQI7 657 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 RAD21O60216 631 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 LARGE1O95461 756 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 RXRAP19793 462 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 COG2Q14746 738 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 NTRK3Q16288 839 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 TTBK2Q6IQ55 1244 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 LBX2Q6XYB7 198 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 PAXIP1Q6ZW49 1069 aaPredicted RBP17.72■□□□□ 0.43
LSM5-207ENST00000410044 IFNL1Q8IU54 200 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 PRPF38AQ8NAV1 312 aaKnown RBP17.72■□□□□ 0.43
LSM5-207ENST00000410044 RIOX1Q9H6W3 641 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 GPCPD1Q9NPB8 672 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 HOXC10Q9NYD6 342 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 MTMR7Q9Y216 660 aa17.72■□□□□ 0.43
LSM5-207ENST00000410044 GOLGA8HP0CJ92 632 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 FDX1P10109 184 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 OSBPP22059 807 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 DSG3P32926 999 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 ADD1P35611 737 aaKnown RBP17.71■□□□□ 0.43
LSM5-207ENST00000410044 STAT2P52630 851 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 CCT2P78371 535 aaKnown RBP17.71■□□□□ 0.43
LSM5-207ENST00000410044 FUT2Q10981 343 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 SCRN1Q12765 414 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 CCDC96Q2M329 555 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 OTUD7BQ6GQQ9 843 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 TMTC3Q6ZXV5 915 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 RAB11FIP4Q86YS3 637 aa17.71■□□□□ 0.43
LSM5-207ENST00000410044 FAM43AQ8N2R8 423 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms