RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CLIP2Q9UDT6 1046 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 KCNJ14Q9UNX9 436 aa6.37□□□□□ -1.39
EPHA4-202ENST00000409854 BTBD18B2RXH4 712 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 EEF2P13639 858 aaKnown RBP6.36□□□□□ -1.39
EPHA4-202ENST00000409854 TNNI2P48788 182 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 ZNF445P59923 1031 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 TNFAIP1Q13829 316 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 GOLGB1Q14789 3259 aaKnown RBP6.36□□□□□ -1.39
EPHA4-202ENST00000409854 SAFBQ15424 915 aaKnown RBP eCLIP6.36□□□□□ -1.39
EPHA4-202ENST00000409854 KIF4BQ2VIQ3 1234 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 CAVIN1Q6NZI2 390 aaKnown RBP6.36□□□□□ -1.39
EPHA4-202ENST00000409854 USP17L2Q6R6M4 530 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 ARHGAP27Q6ZUM4 889 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 LRRC47Q8N1G4 583 aaKnown RBP6.36□□□□□ -1.39
EPHA4-202ENST00000409854 DAGLBQ8NCG7 672 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 DCAF4Q8WV16 495 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 TMEM39BQ9GZU3 492 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.36□□□□□ -1.39
EPHA4-202ENST00000409854 VEZTQ9HBM0 779 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 PTPRFP10586 1907 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 FSD2A1L4K1 749 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 hCG_1984214I3L0E3 225 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 M0R2N6 131 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 MPHOSPH10O00566 681 aaKnown RBP6.36□□□□□ -1.39
EPHA4-202ENST00000409854 YBX3P16989 372 aaKnown RBP eCLIP6.36□□□□□ -1.39
EPHA4-202ENST00000409854 KRT2P35908 639 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 SEPT2Q15019 361 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 PTPAQ15257 358 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 ZSCAN23Q3MJ62 389 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 GPATCH4Q5T3I0 446 aaKnown RBP6.36□□□□□ -1.39
EPHA4-202ENST00000409854 RBM26Q5T8P6 1007 aaKnown RBP6.36□□□□□ -1.39
EPHA4-202ENST00000409854 ANO1Q5XXA6 986 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 CDAN1Q8IWY9 1227 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 ZNF713Q8N859 430 aaPredicted RBP6.36□□□□□ -1.39
EPHA4-202ENST00000409854 MTMR8Q96EF0 704 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 GPRC5DQ9NZD1 345 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 ISY1Q9ULR0 285 aaKnown RBP6.36□□□□□ -1.39
EPHA4-202ENST00000409854 CLIC4Q9Y696 253 aa6.36□□□□□ -1.39
EPHA4-202ENST00000409854 hCG_1642624A0A1W2PR95 340 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 STXBP3O00186 592 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 GDF11O95390 407 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 GOLGA8HP0CJ92 632 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 VEGFAP15692 232 aaPredicted RBP6.35□□□□□ -1.39
EPHA4-202ENST00000409854 ICA1Q05084 483 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 SAMD1Q6SPF0 538 aaPredicted RBP6.35□□□□□ -1.39
EPHA4-202ENST00000409854 OXER1Q8TDS5 423 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 GMCL1Q96IK5 515 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 BARHL2Q9NY43 387 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 GJA3Q9Y6H8 435 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 MYH7BA7E2Y1 1941 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 GH2P01242 217 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 TOB1P50616 345 aaPredicted RBP6.35□□□□□ -1.39
EPHA4-202ENST00000409854 NR5A1Q13285 461 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 SLC39A14Q15043 492 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 RILPL1Q5EBL4 403 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 WWC2Q6AWC2 1192 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 GALNT17Q6IS24 598 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 SAMD7Q7Z3H4 446 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 KCNG4Q8TDN1 519 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 SYAP1Q96A49 352 aaPredicted RBP6.35□□□□□ -1.39
EPHA4-202ENST00000409854 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.35□□□□□ -1.39
EPHA4-202ENST00000409854 HACL1Q9UJ83 578 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 ZBTB21Q9ULJ3 1066 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 RLFQ13129 1914 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 A0A1W2PQ27 194 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 A0A1W2PQ64 194 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 A0A1W2PQD8 194 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 PHF20L1A8MW92 1017 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 PPP6R2O75170 966 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 CALML3P27482 149 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 RASA3Q14644 834 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 TYW1BQ6NUM6 668 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 CCDC148Q8NFR7 591 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 GZF1Q9H116 711 aaPredicted RBP6.35□□□□□ -1.39
EPHA4-202ENST00000409854 CABP5Q9NP86 173 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.35□□□□□ -1.39
EPHA4-202ENST00000409854 GINM1Q9NU53 330 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 SSC5DA1L4H1 1573 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 LOC285556D6RIA3 1793 aa6.35□□□□□ -1.39
EPHA4-202ENST00000409854 ASTN2O75129 1339 aaPredicted RBP6.34□□□□□ -1.39
EPHA4-202ENST00000409854 FRMPD2Q68DX3 1309 aaPredicted RBP6.34□□□□□ -1.39
EPHA4-202ENST00000409854 PITPNM2Q9BZ72 1349 aa6.34□□□□□ -1.39
EPHA4-202ENST00000409854 ESYT2A0FGR8 921 aa6.34□□□□□ -1.39
EPHA4-202ENST00000409854 CAP2P40123 477 aa6.34□□□□□ -1.39
EPHA4-202ENST00000409854 GNL2Q13823 731 aaKnown RBP6.34□□□□□ -1.39
EPHA4-202ENST00000409854 TBC1D10BQ4KMP7 808 aaPredicted RBP6.34□□□□□ -1.39
EPHA4-202ENST00000409854 CCDC183Q5T5S1 534 aa6.34□□□□□ -1.39
EPHA4-202ENST00000409854 ADALQ6DHV7 355 aa6.34□□□□□ -1.39
EPHA4-202ENST00000409854 APOBEC3FQ8IUX4 373 aaKnown RBP6.34□□□□□ -1.39
EPHA4-202ENST00000409854 GPKOWQ92917 476 aaPredicted RBP eCLIP6.34□□□□□ -1.39
EPHA4-202ENST00000409854 RRP36Q96EU6 259 aaKnown RBP6.34□□□□□ -1.39
EPHA4-202ENST00000409854 ZMYND12Q9H0C1 365 aa6.34□□□□□ -1.39
EPHA4-202ENST00000409854 BRMS1Q9HCU9 246 aa6.34□□□□□ -1.39
EPHA4-202ENST00000409854 PCDHA7Q9UN72 937 aa6.34□□□□□ -1.39
EPHA4-202ENST00000409854 PCDHA4Q9UN74 947 aa6.34□□□□□ -1.39
EPHA4-202ENST00000409854 H7C1D1 291 aa6.34□□□□□ -1.39
EPHA4-202ENST00000409854 SPTLC2O15270 562 aa6.34□□□□□ -1.39
EPHA4-202ENST00000409854 STK38Q15208 465 aa6.34□□□□□ -1.39
EPHA4-202ENST00000409854 SF3A1Q15459 793 aaKnown RBP6.34□□□□□ -1.39
EPHA4-202ENST00000409854 EARS2Q5JPH6 523 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms