RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 CCDC26Q8TAB7 109 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 PABPC4Q13310 644 aaKnown RBP eCLIP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 CEP120Q8N960 986 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 CSRNP1Q96S65 589 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 PPP1R12CQ9BZL4 782 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 SETDB1Q15047 1291 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 DHX32Q7L7V1 743 aaKnown RBP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 UHMK1Q8TAS1 419 aaKnown RBP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 EDC3Q96F86 508 aaKnown RBP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 M0R2C6 588 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 CPSF3Q9UKF6 684 aaKnown RBP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 PCF11O94913 1555 aaKnown RBP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 CDR2Q01850 454 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 NUCB1Q02818 461 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 DMP1Q13316 513 aaPredicted RBP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 USPL1Q5W0Q7 1092 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 TYW1BQ6NUM6 668 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 PDCD6IPQ8WUM4 868 aaKnown RBP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 PSPC1Q8WXF1 523 aaKnown RBP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 KRT12Q99456 494 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 CCDC68Q9H2F9 335 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 SAMD15Q9P1V8 674 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 PTPN22Q9Y2R2 807 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 YTHDC2Q9H6S0 1430 aaKnown RBP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 CETN3O15182 167 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 HABP4Q5JVS0 413 aaKnown RBP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 TTC38Q5R3I4 469 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 GABPB2Q8TAK5 448 aaPredicted RBP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 TSGA10Q9BZW7 698 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 SWAP70Q9UH65 585 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 ANGPTL3Q9Y5C1 460 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 MAD1L1Q9Y6D9 718 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 DCAF15Q66K64 600 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 ANKRD42Q8N9B4 389 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 FAM49AQ9H0Q0 323 aaPredicted RBP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 FAM207AQ9NSI2 230 aaPredicted RBP9.28□□□□□ -0.92
SCN9A-203ENST00000409672 TAB2Q9NYJ8 693 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 LRWD1Q9UFC0 647 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 UHRF1BP1LA0JNW5 1464 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 CEP104O60308 925 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 SLC16A2P36021 539 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 GPBP1Q86WP2 473 aa9.28□□□□□ -0.92
SCN9A-203ENST00000409672 F13A1P00488 732 aa9.27□□□□□ -0.92
SCN9A-203ENST00000409672 ANGPTL8Q6UXH0 198 aa9.27□□□□□ -0.92
SCN9A-203ENST00000409672 MRPL50Q8N5N7 158 aaKnown RBP9.27□□□□□ -0.92
SCN9A-203ENST00000409672 LSM14BQ9BX40 385 aaKnown RBP9.27□□□□□ -0.92
SCN9A-203ENST00000409672 PSTPIP2Q9H939 334 aa9.27□□□□□ -0.92
SCN9A-203ENST00000409672 OPA1O60313 960 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 TMEM191BP0C7N4 346 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 BCRP11274 1271 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 TYRO3Q06418 890 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 KCTD2Q14681 263 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 FAM173BQ6P4H8 233 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 TTC14Q96N46 770 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 POLR2MP0CAP2 368 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 ERCC6LQ2NKX8 1250 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 TNNI3KQ59H18 835 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 DENND2CQ68D51 928 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 PPP4R1Q8TF05 950 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 NLRP4Q96MN2 994 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 GDAP1L1Q96MZ0 367 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 EFCC1Q9HA90 598 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 FPGT-TNNI3KV9GXZ4 949 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 TMEM232C9JQI7 657 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 SLC9A5Q14940 896 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 FAM117BQ6P1L5 589 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 TRMT44Q8IYL2 757 aaKnown RBP9.27□□□□□ -0.93
SCN9A-203ENST00000409672 RBSNQ9H1K0 784 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 MRPL46Q9H2W6 279 aaKnown RBP9.27□□□□□ -0.93
SCN9A-203ENST00000409672 ABCC11Q96J66 1382 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 WHAMMQ8TF30 809 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 C21orf2O43822 256 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 BTDP43251 543 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 ATP6V1E2Q96A05 226 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 FAM114A2Q9NRY5 505 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 USP17L12C9JPN9 530 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 USP17L21D6R901 530 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 F5H423 210 aaPredicted RBP9.27□□□□□ -0.93
SCN9A-203ENST00000409672 CAPN2P17655 700 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 TRAPPC10P48553 1259 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 NEDD9Q14511 834 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 RILPL1Q5EBL4 403 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 FYB2Q5VWT5 728 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 PLBD2Q8NHP8 589 aa9.27□□□□□ -0.93
SCN9A-203ENST00000409672 RFC1P35251 1148 aaPredicted RBP9.26□□□□□ -0.93
SCN9A-203ENST00000409672 LACTBP83111 547 aaPredicted RBP9.26□□□□□ -0.93
SCN9A-203ENST00000409672 SCARA5Q6ZMJ2 495 aa9.26□□□□□ -0.93
SCN9A-203ENST00000409672 FAM196AQ6ZSG2 479 aa9.26□□□□□ -0.93
SCN9A-203ENST00000409672 METTL23Q86XA0 190 aa9.26□□□□□ -0.93
SCN9A-203ENST00000409672 FAM149B1Q96BN6 582 aa9.26□□□□□ -0.93
SCN9A-203ENST00000409672 STK38LQ9Y2H1 464 aa9.26□□□□□ -0.93
SCN9A-203ENST00000409672 SYNRGQ9UMZ2 1314 aa9.26□□□□□ -0.93
SCN9A-203ENST00000409672 AKR1B15C9JRZ8 316 aaPredicted RBP9.26□□□□□ -0.93
SCN9A-203ENST00000409672 IGSF22Q8N9C0 903 aa9.26□□□□□ -0.93
SCN9A-203ENST00000409672 PHACTR3Q96KR7 559 aa9.26□□□□□ -0.93
SCN9A-203ENST00000409672 SUGT1Q9Y2Z0 365 aa9.26□□□□□ -0.93
SCN9A-203ENST00000409672 PLCD1P51178 756 aa9.26□□□□□ -0.93
SCN9A-203ENST00000409672 ABCB5Q2M3G0 1257 aa9.26□□□□□ -0.93
SCN9A-203ENST00000409672 HS1BP3Q53T59 392 aa9.26□□□□□ -0.93
SCN9A-203ENST00000409672 HHATQ5VTY9 493 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms