RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 PER1O15534 1290 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-203ENST00000409598 ABCD1P33897 745 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 HMGCS2P54868 508 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 NEDD9Q14511 834 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 RAB11FIP4Q86YS3 637 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 RNF214Q8ND24 703 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 SOCS4Q8WXH5 440 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 TBC1D5Q92609 795 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 ZNF592Q92610 1267 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 RPAP1Q9BWH6 1393 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-203ENST00000409598 hCG_1984214I3L0E3 225 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 SP3Q02447 781 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 CXCL9Q07325 125 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 HDAC1Q13547 482 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-203ENST00000409598 NUDT18Q6ZVK8 323 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 IFNL3Q8IZI9 196 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 ZNF713Q8N859 430 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-203ENST00000409598 PNMA1Q8ND90 353 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 NOX5Q96PH1 765 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 SCAND2PQ9GZW5 306 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-203ENST00000409598 DCTPP1Q9H773 170 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 POLR3EQ9NVU0 708 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 EVI5O60447 810 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 POLGP54098 1239 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-203ENST00000409598 BFSP2Q13515 415 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 JAKMIP3Q5VZ66 844 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 NCAPH2Q6IBW4 605 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 PLEKHH3Q7Z736 793 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 PRPF38AQ8NAV1 312 aaKnown RBP8.42□□□□□ -1.06
SH3D19-203ENST00000409598 SLC7A3Q8WY07 619 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 GLIS2Q9BZE0 524 aaPredicted RBP8.42□□□□□ -1.06
SH3D19-203ENST00000409598 MROH7-TTC4A0A0A0MT08 1334 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 PHLPP2Q6ZVD8 1323 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 SERPINC1P01008 464 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 YWHAEP62258 255 aaKnown RBP8.42□□□□□ -1.06
SH3D19-203ENST00000409598 MECOMQ03112 1051 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 PLA2G4DQ86XP0 818 aa8.42□□□□□ -1.06
SH3D19-203ENST00000409598 TYW5A2RUC4 315 aaKnown RBP8.41□□□□□ -1.06
SH3D19-203ENST00000409598 RPLP2P05387 115 aaKnown RBP8.41□□□□□ -1.06
SH3D19-203ENST00000409598 C6orf222P0C671 652 aaPredicted RBP8.41□□□□□ -1.06
SH3D19-203ENST00000409598 ARID4AP29374 1257 aaPredicted RBP8.41□□□□□ -1.06
SH3D19-203ENST00000409598 GUCY1B3Q02153 619 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 BIRC3Q13489 604 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 HS1BP3Q53T59 392 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 SLFN12Q8IYM2 578 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 NSUN6Q8TEA1 469 aaKnown RBP8.41□□□□□ -1.06
SH3D19-203ENST00000409598 SETBP1Q9Y6X0 1596 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 KIF1AQ12756 1690 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 SMTNL1A8MU46 457 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 CACNB3P54284 484 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 POLA2Q14181 598 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 GALNT17Q6IS24 598 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 EEPD1Q7L9B9 569 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 YAF2Q8IY57 180 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 RNF34Q969K3 372 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 ZSCAN10Q96SZ4 725 aaPredicted RBP8.41□□□□□ -1.06
SH3D19-203ENST00000409598 DNM3Q9UQ16 869 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 POLRMTO00411 1230 aaKnown RBP8.41□□□□□ -1.06
SH3D19-203ENST00000409598 CXCL11O14625 94 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 RAG1P15918 1043 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 CDR1P51861 262 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 DPH6Q7L8W6 267 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 FMNL3Q8IVF7 1028 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 SCYL3Q8IZE3 742 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 CNNM3Q8NE01 707 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 COMMD10Q9Y6G5 202 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 LRRIQ1Q96JM4 1722 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 KLRF2D3W0D1 207 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 HSPD1P10809 573 aaKnown RBP8.41□□□□□ -1.06
SH3D19-203ENST00000409598 RRAGBQ5VZM2 374 aa8.41□□□□□ -1.06
SH3D19-203ENST00000409598 NBPF10Q6P3W6 841 aaKnown RBP8.41□□□□□ -1.06
SH3D19-203ENST00000409598 UPF3BQ9BZI7 483 aaKnown RBP8.41□□□□□ -1.06
SH3D19-203ENST00000409598 PRPF6O94906 941 aaKnown RBP8.4□□□□□ -1.06
SH3D19-203ENST00000409598 CTDSPL2Q05D32 466 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 PUS3Q9BZE2 481 aaKnown RBP8.4□□□□□ -1.06
SH3D19-203ENST00000409598 RNF146Q9NTX7 359 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 FRMPD2Q68DX3 1309 aaPredicted RBP8.4□□□□□ -1.06
SH3D19-203ENST00000409598 KDM6AO15550 1401 aaPredicted RBP8.4□□□□□ -1.06
SH3D19-203ENST00000409598 WDR46O15213 610 aaKnown RBP8.4□□□□□ -1.06
SH3D19-203ENST00000409598 DDAH1O94760 285 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 CTNNA2P26232 953 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 PLCD1P51178 756 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 ZNF827Q17R98 1081 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 Q6ZUG5 572 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 RPUSD2Q8IZ73 545 aaKnown RBP8.4□□□□□ -1.06
SH3D19-203ENST00000409598 RGS22Q8NE09 1264 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 SDR42E1Q8WUS8 393 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 GAS2L1Q99501 681 aaPredicted RBP8.4□□□□□ -1.06
SH3D19-203ENST00000409598 ATP11BQ9Y2G3 1177 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 COL5A2P05997 1499 aaPredicted RBP8.4□□□□□ -1.06
SH3D19-203ENST00000409598 ATP8B3O60423 1300 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 PNPLA7Q6ZV29 1317 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 NEXMIFQ5QGS0 1516 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 ASIC1P78348 528 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 CDC42EP1Q00587 391 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 XKR9Q5GH70 373 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 BMP2KLQ5H9B9 411 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 NLRP7Q8WX94 980 aa8.4□□□□□ -1.06
SH3D19-203ENST00000409598 EDC3Q96F86 508 aaKnown RBP8.4□□□□□ -1.06
SH3D19-203ENST00000409598 CDCA5Q96FF9 252 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms