RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 IRF6O14896 467 aa17.77■□□□□ 0.44
AP1S3-204ENST00000409375 BMP3P12645 472 aa17.77■□□□□ 0.44
AP1S3-204ENST00000409375 RXRAP19793 462 aa17.77■□□□□ 0.44
AP1S3-204ENST00000409375 APLP1P51693 650 aa17.77■□□□□ 0.44
AP1S3-204ENST00000409375 GTF2A2P52657 109 aa17.77■□□□□ 0.44
AP1S3-204ENST00000409375 CCT2P78371 535 aaKnown RBP17.77■□□□□ 0.44
AP1S3-204ENST00000409375 ZNF543Q08ER8 600 aa17.77■□□□□ 0.44
AP1S3-204ENST00000409375 RAB11FIP4Q86YS3 637 aa17.77■□□□□ 0.44
AP1S3-204ENST00000409375 CCDC144CPQ8IYA2 1237 aa17.77■□□□□ 0.44
AP1S3-204ENST00000409375 PROCA1Q8NCQ7 364 aaPredicted RBP17.77■□□□□ 0.44
AP1S3-204ENST00000409375 CCDC102AQ96A19 550 aa17.77■□□□□ 0.44
AP1S3-204ENST00000409375 LLPHQ9BRT6 129 aaKnown RBP17.77■□□□□ 0.44
AP1S3-204ENST00000409375 HPS5Q9UPZ3 1129 aa17.77■□□□□ 0.44
AP1S3-204ENST00000409375 KIF3AQ9Y496 699 aa17.77■□□□□ 0.44
AP1S3-204ENST00000409375 A0A0G2JLL6 359 aaPredicted RBP17.76■□□□□ 0.43
AP1S3-204ENST00000409375 CETPP11597 493 aa17.76■□□□□ 0.43
AP1S3-204ENST00000409375 SMARCA1P28370 1054 aa17.76■□□□□ 0.43
AP1S3-204ENST00000409375 HMGCS2P54868 508 aa17.76■□□□□ 0.43
AP1S3-204ENST00000409375 SCRN1Q12765 414 aa17.76■□□□□ 0.43
AP1S3-204ENST00000409375 IKQ13123 557 aaPredicted RBP17.76■□□□□ 0.43
AP1S3-204ENST00000409375 PABPC4Q13310 644 aaKnown RBP eCLIP17.76■□□□□ 0.43
AP1S3-204ENST00000409375 SPRYD7Q5W111 196 aa17.76■□□□□ 0.43
AP1S3-204ENST00000409375 PRRT2Q7Z6L0 340 aaPredicted RBP17.76■□□□□ 0.43
AP1S3-204ENST00000409375 CCDC83Q8IWF9 413 aa17.76■□□□□ 0.43
AP1S3-204ENST00000409375 SPICE1Q8N0Z3 855 aa17.76■□□□□ 0.43
AP1S3-204ENST00000409375 CHURC1Q8WUH1 139 aa17.76■□□□□ 0.43
AP1S3-204ENST00000409375 CREBZFQ9NS37 354 aa17.76■□□□□ 0.43
AP1S3-204ENST00000409375 RBM27Q9P2N5 1060 aaKnown RBP17.76■□□□□ 0.43
AP1S3-204ENST00000409375 PTPRFP10586 1907 aa17.76■□□□□ 0.43
AP1S3-204ENST00000409375 PALM3A6NDB9 673 aaPredicted RBP17.75■□□□□ 0.43
AP1S3-204ENST00000409375 KLRF2D3W0D1 207 aa17.75■□□□□ 0.43
AP1S3-204ENST00000409375 LARGE1O95461 756 aa17.75■□□□□ 0.43
AP1S3-204ENST00000409375 VCAM1P19320 739 aa17.75■□□□□ 0.43
AP1S3-204ENST00000409375 HMGN5P82970 282 aaKnown RBP17.75■□□□□ 0.43
AP1S3-204ENST00000409375 AKAP17AQ02040 695 aaKnown RBP17.75■□□□□ 0.43
AP1S3-204ENST00000409375 CUL4AQ13619 759 aa17.75■□□□□ 0.43
AP1S3-204ENST00000409375 GADL1Q6ZQY3 521 aa17.75■□□□□ 0.43
AP1S3-204ENST00000409375 FAM160B2Q86V87 743 aa17.75■□□□□ 0.43
AP1S3-204ENST00000409375 TRIM22Q8IYM9 498 aa17.75■□□□□ 0.43
AP1S3-204ENST00000409375 NECAB1Q8N987 351 aa17.75■□□□□ 0.43
AP1S3-204ENST00000409375 CNKSR2Q8WXI2 1034 aa17.75■□□□□ 0.43
AP1S3-204ENST00000409375 INTS4Q96HW7 963 aaKnown RBP17.75■□□□□ 0.43
AP1S3-204ENST00000409375 MAD2L2Q9UI95 211 aa17.75■□□□□ 0.43
AP1S3-204ENST00000409375 FEM1BQ9UK73 627 aa17.75■□□□□ 0.43
AP1S3-204ENST00000409375 PLA2G6O60733 806 aa17.74■□□□□ 0.43
AP1S3-204ENST00000409375 STAT2P52630 851 aa17.74■□□□□ 0.43
AP1S3-204ENST00000409375 FAM83BQ5T0W9 1011 aa17.74■□□□□ 0.43
AP1S3-204ENST00000409375 PAXIP1Q6ZW49 1069 aaPredicted RBP17.74■□□□□ 0.43
AP1S3-204ENST00000409375 TMTC3Q6ZXV5 915 aa17.74■□□□□ 0.43
AP1S3-204ENST00000409375 KCTD1Q719H9 257 aa17.74■□□□□ 0.43
AP1S3-204ENST00000409375 RASAL3Q86YV0 1011 aa17.74■□□□□ 0.43
AP1S3-204ENST00000409375 NCOA5Q9HCD5 579 aaKnown RBP17.74■□□□□ 0.43
AP1S3-204ENST00000409375 GPCPD1Q9NPB8 672 aa17.74■□□□□ 0.43
AP1S3-204ENST00000409375 EMILIN3Q9NT22 766 aa17.74■□□□□ 0.43
AP1S3-204ENST00000409375 LOC285556D6RIA3 1793 aa17.74■□□□□ 0.43
AP1S3-204ENST00000409375 FRMPD2Q68DX3 1309 aaPredicted RBP17.73■□□□□ 0.43
AP1S3-204ENST00000409375 TMEM232C9JQI7 657 aa17.73■□□□□ 0.43
AP1S3-204ENST00000409375 SLC10A3P09131 477 aa17.73■□□□□ 0.43
AP1S3-204ENST00000409375 IFNAR1P17181 557 aa17.73■□□□□ 0.43
AP1S3-204ENST00000409375 CDC27P30260 824 aa17.73■□□□□ 0.43
AP1S3-204ENST00000409375 ADD1P35611 737 aaKnown RBP17.73■□□□□ 0.43
AP1S3-204ENST00000409375 SPZ1Q9BXG8 430 aa17.73■□□□□ 0.43
AP1S3-204ENST00000409375 TANGO6Q9C0B7 1094 aa17.73■□□□□ 0.43
AP1S3-204ENST00000409375 RPAP3Q9H6T3 665 aaPredicted RBP17.73■□□□□ 0.43
AP1S3-204ENST00000409375 SMC3Q9UQE7 1217 aa17.73■□□□□ 0.43
AP1S3-204ENST00000409375 MANSC4A6NHS7 340 aaPredicted RBP17.72■□□□□ 0.43
AP1S3-204ENST00000409375 USP17L15C9J2P7 530 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 USP17L13C9JLJ4 530 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 USP17L11C9JVI0 530 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 USP17L18D6R9N7 530 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 USP17L22D6RA61 530 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 USP17L17D6RBQ6 530 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 USP17L19D6RCP7 530 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 USP17L20D6RJB6 530 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 GOLGA8HP0CJ92 632 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 FDX1P10109 184 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 INHBEP58166 350 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 SSRP1Q08945 709 aaKnown RBP17.72■□□□□ 0.43
AP1S3-204ENST00000409375 USP17L24Q0WX57 530 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 BTNL9Q6UXG8 535 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 STAG2Q8N3U4 1231 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 WASF1Q92558 559 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 NUP88Q99567 741 aaPredicted RBP17.72■□□□□ 0.43
AP1S3-204ENST00000409375 RNF26Q9BY78 433 aaPredicted RBP17.72■□□□□ 0.43
AP1S3-204ENST00000409375 FAM217BQ9NTX9 383 aaPredicted RBP17.72■□□□□ 0.43
AP1S3-204ENST00000409375 SEC63Q9UGP8 760 aaKnown RBP17.72■□□□□ 0.43
AP1S3-204ENST00000409375 AGTPBP1Q9UPW5 1226 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 STK36Q9NRP7 1315 aa17.72■□□□□ 0.43
AP1S3-204ENST00000409375 CCL15-CCL14A0A0B4J2E2 113 aa17.71■□□□□ 0.43
AP1S3-204ENST00000409375 PLEKHA8P1O95397 391 aa17.71■□□□□ 0.43
AP1S3-204ENST00000409375 GJA5P36382 358 aa17.71■□□□□ 0.43
AP1S3-204ENST00000409375 ST3GAL1Q11201 340 aa17.71■□□□□ 0.43
AP1S3-204ENST00000409375 TRAF1Q13077 416 aa17.71■□□□□ 0.43
AP1S3-204ENST00000409375 CCL15Q16663 113 aa17.71■□□□□ 0.43
AP1S3-204ENST00000409375 DEFB115Q30KQ5 88 aa17.71■□□□□ 0.43
AP1S3-204ENST00000409375 SYDE2Q5VT97 1194 aa17.71■□□□□ 0.43
AP1S3-204ENST00000409375 PRPF38AQ8NAV1 312 aaKnown RBP17.71■□□□□ 0.43
AP1S3-204ENST00000409375 FAM184AQ8NB25 1140 aa17.71■□□□□ 0.43
AP1S3-204ENST00000409375 RRP36Q96EU6 259 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms