RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 CCDC96Q2M329 555 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 LARP1BQ659C4 914 aaKnown RBP19.55■□□□□ 0.72
SSB-202ENST00000409333 SPICE1Q8N0Z3 855 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 DCAF4Q8WV16 495 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 AIFM3Q96NN9 605 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 NUP88Q99567 741 aaPredicted RBP19.55■□□□□ 0.72
SSB-202ENST00000409333 GOPCQ9HD26 462 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 GPCPD1Q9NPB8 672 aa19.55■□□□□ 0.72
SSB-202ENST00000409333 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.55■□□□□ 0.72
SSB-202ENST00000409333 CYTH3O43739 400 aa19.54■□□□□ 0.72
SSB-202ENST00000409333 SLC1A4P43007 532 aa19.54■□□□□ 0.72
SSB-202ENST00000409333 GNAQP50148 359 aa19.54■□□□□ 0.72
SSB-202ENST00000409333 TRIM22Q8IYM9 498 aa19.54■□□□□ 0.72
SSB-202ENST00000409333 FEZ1Q99689 392 aa19.54■□□□□ 0.72
SSB-202ENST00000409333 RNF26Q9BY78 433 aaPredicted RBP19.54■□□□□ 0.72
SSB-202ENST00000409333 SH2D4AQ9H788 454 aa19.54■□□□□ 0.72
SSB-202ENST00000409333 VCPKMTQ9H867 229 aa19.54■□□□□ 0.72
SSB-202ENST00000409333 STX6O43752 255 aa19.53■□□□□ 0.72
SSB-202ENST00000409333 DGKZQ13574 1117 aa19.53■□□□□ 0.72
SSB-202ENST00000409333 MAP3K11Q16584 847 aa19.53■□□□□ 0.72
SSB-202ENST00000409333 TTBK2Q6IQ55 1244 aa19.53■□□□□ 0.72
SSB-202ENST00000409333 CLMNQ96JQ2 1002 aa19.53■□□□□ 0.72
SSB-202ENST00000409333 GPBP1L1Q9HC44 474 aaPredicted RBP19.53■□□□□ 0.72
SSB-202ENST00000409333 ISY1Q9ULR0 285 aaKnown RBP19.53■□□□□ 0.72
SSB-202ENST00000409333 ZDHHC9Q9Y397 364 aa19.53■□□□□ 0.72
SSB-202ENST00000409333 ZHX2Q9Y6X8 837 aa19.53■□□□□ 0.72
SSB-202ENST00000409333 LOC285556D6RIA3 1793 aa19.52■□□□□ 0.72
SSB-202ENST00000409333 GPATCH4Q5T3I0 446 aaKnown RBP19.52■□□□□ 0.72
SSB-202ENST00000409333 CHADLQ6NUI6 762 aa19.52■□□□□ 0.72
SSB-202ENST00000409333 PIBF1Q8WXW3 757 aa19.52■□□□□ 0.72
SSB-202ENST00000409333 GMCL1Q96IK5 515 aa19.52■□□□□ 0.72
SSB-202ENST00000409333 UBA5Q9GZZ9 404 aa19.52■□□□□ 0.72
SSB-202ENST00000409333 KIF3AQ9Y496 699 aa19.52■□□□□ 0.72
SSB-202ENST00000409333 CSADQ9Y600 493 aa19.52■□□□□ 0.72
SSB-202ENST00000409333 V9GY48 417 aaPredicted RBP19.52■□□□□ 0.72
SSB-202ENST00000409333 PRPF3O43395 683 aaKnown RBP19.52■□□□□ 0.71
SSB-202ENST00000409333 DEXIO95424 95 aa19.52■□□□□ 0.71
SSB-202ENST00000409333 PDCP20941 246 aa19.52■□□□□ 0.71
SSB-202ENST00000409333 SPP2Q13103 211 aa19.52■□□□□ 0.71
SSB-202ENST00000409333 MTMR2Q13614 643 aa19.52■□□□□ 0.71
SSB-202ENST00000409333 ANKRD13AQ8IZ07 590 aa19.52■□□□□ 0.71
SSB-202ENST00000409333 ZNF280CQ8ND82 737 aa19.52■□□□□ 0.71
SSB-202ENST00000409333 LZTS2Q9BRK4 669 aa19.52■□□□□ 0.71
SSB-202ENST00000409333 WDR18Q9BV38 432 aa19.52■□□□□ 0.71
SSB-202ENST00000409333 SPZ1Q9BXG8 430 aa19.52■□□□□ 0.71
SSB-202ENST00000409333 AS3MTQ9HBK9 375 aa19.52■□□□□ 0.71
SSB-202ENST00000409333 GJB4Q9NTQ9 266 aa19.52■□□□□ 0.71
SSB-202ENST00000409333 SMCHD1A6NHR9 2005 aa19.52■□□□□ 0.71
SSB-202ENST00000409333 COL11A1P12107 1806 aaPredicted RBP19.51■□□□□ 0.71
SSB-202ENST00000409333 RLFQ13129 1914 aa19.51■□□□□ 0.71
SSB-202ENST00000409333 VPS37CA5D8V6 355 aaPredicted RBP19.51■□□□□ 0.71
SSB-202ENST00000409333 TRIM75PA6NK02 468 aa19.51■□□□□ 0.71
SSB-202ENST00000409333 USP17L10C9JJH3 530 aa19.51■□□□□ 0.71
SSB-202ENST00000409333 BRD1O95696 1058 aa19.51■□□□□ 0.71
SSB-202ENST00000409333 BMP3P12645 472 aa19.51■□□□□ 0.71
SSB-202ENST00000409333 NUCB2P80303 420 aa19.51■□□□□ 0.71
SSB-202ENST00000409333 PKN1Q16512 942 aa19.51■□□□□ 0.71
SSB-202ENST00000409333 FOXD4L5Q5VV16 416 aaPredicted RBP19.51■□□□□ 0.71
SSB-202ENST00000409333 ARMC9Q7Z3E5 817 aa19.51■□□□□ 0.71
SSB-202ENST00000409333 CNKSR2Q8WXI2 1034 aa19.51■□□□□ 0.71
SSB-202ENST00000409333 FOXD4L4Q8WXT5 416 aaPredicted RBP19.51■□□□□ 0.71
SSB-202ENST00000409333 ALG1Q9BT22 464 aa19.51■□□□□ 0.71
SSB-202ENST00000409333 KIAA1683Q9H0B3 1180 aa19.51■□□□□ 0.71
SSB-202ENST00000409333 ELP3Q9H9T3 547 aa19.51■□□□□ 0.71
SSB-202ENST00000409333 MTMR6Q9Y217 621 aa19.51■□□□□ 0.71
SSB-202ENST00000409333 ITGBL1O95965 494 aaPredicted RBP19.5■□□□□ 0.71
SSB-202ENST00000409333 SLC16A2P36021 539 aa19.5■□□□□ 0.71
SSB-202ENST00000409333 AKAP17AQ02040 695 aaKnown RBP19.5■□□□□ 0.71
SSB-202ENST00000409333 SMARCA1P28370 1054 aa19.49■□□□□ 0.71
SSB-202ENST00000409333 GUCY1B3Q02153 619 aa19.49■□□□□ 0.71
SSB-202ENST00000409333 FAM83BQ5T0W9 1011 aa19.49■□□□□ 0.71
SSB-202ENST00000409333 OTUD7BQ6GQQ9 843 aa19.49■□□□□ 0.71
SSB-202ENST00000409333 C8orf76Q96K31 380 aa19.49■□□□□ 0.71
SSB-202ENST00000409333 RIOX1Q9H6W3 641 aa19.49■□□□□ 0.71
SSB-202ENST00000409333 VAT1LQ9HCJ6 419 aa19.49■□□□□ 0.71
SSB-202ENST00000409333 AFG3L2Q9Y4W6 797 aa19.49■□□□□ 0.71
SSB-202ENST00000409333 CELF2O95319 508 aaKnown RBP19.49■□□□□ 0.71
SSB-202ENST00000409333 BACE1P56817 501 aa19.49■□□□□ 0.71
SSB-202ENST00000409333 EMILIN3Q9NT22 766 aa19.49■□□□□ 0.71
SSB-202ENST00000409333 WDR33Q9C0J8 1336 aaKnown RBP19.49■□□□□ 0.71
SSB-202ENST00000409333 TMEM232C9JQI7 657 aa19.48■□□□□ 0.71
SSB-202ENST00000409333 H3BQV1 296 aa19.48■□□□□ 0.71
SSB-202ENST00000409333 LDLRAD1Q5T700 205 aa19.48■□□□□ 0.71
SSB-202ENST00000409333 IFFO2Q5TF58 517 aa19.48■□□□□ 0.71
SSB-202ENST00000409333 HOMER1Q86YM7 354 aa19.48■□□□□ 0.71
SSB-202ENST00000409333 ADGRF4Q8IZF3 695 aa19.48■□□□□ 0.71
SSB-202ENST00000409333 WASF1Q92558 559 aa19.48■□□□□ 0.71
SSB-202ENST00000409333 SHISA4Q96DD7 197 aa19.48■□□□□ 0.71
SSB-202ENST00000409333 PIGSQ96S52 555 aa19.48■□□□□ 0.71
SSB-202ENST00000409333 KIF3CO14782 793 aa19.47■□□□□ 0.71
SSB-202ENST00000409333 ZSCAN22P10073 491 aaPredicted RBP19.47■□□□□ 0.71
SSB-202ENST00000409333 USP14P54578 494 aa19.47■□□□□ 0.71
SSB-202ENST00000409333 HMGCS2P54868 508 aa19.47■□□□□ 0.71
SSB-202ENST00000409333 PFKFB3Q16875 520 aaPredicted RBP19.47■□□□□ 0.71
SSB-202ENST00000409333 LPAR1Q92633 364 aa19.47■□□□□ 0.71
SSB-202ENST00000409333 JMJD4Q9H9V9 463 aa19.47■□□□□ 0.71
SSB-202ENST00000409333 GBA2Q9HCG7 927 aaPredicted RBP19.47■□□□□ 0.71
SSB-202ENST00000409333 SCG2P13521 617 aa19.47■□□□□ 0.71
SSB-202ENST00000409333 FBXO18Q8NFZ0 1043 aa19.47■□□□□ 0.71
SSB-202ENST00000409333 RRP36Q96EU6 259 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms