RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 SLURP2P0DP57 97 aa12.96□□□□□ -0.33
RAB1C-201ENST00000409159 ATP2B2Q01814 1243 aa12.96□□□□□ -0.33
RAB1C-201ENST00000409159 MAP3K11Q16584 847 aa12.96□□□□□ -0.33
RAB1C-201ENST00000409159 PPP1R18Q6NYC8 613 aa12.96□□□□□ -0.33
RAB1C-201ENST00000409159 USP17L2Q6R6M4 530 aa12.96□□□□□ -0.33
RAB1C-201ENST00000409159 STAG2Q8N3U4 1231 aa12.96□□□□□ -0.33
RAB1C-201ENST00000409159 TMEM87AQ8NBN3 555 aa12.96□□□□□ -0.33
RAB1C-201ENST00000409159 CCDC148Q8NFR7 591 aa12.96□□□□□ -0.33
RAB1C-201ENST00000409159 SCAND2PQ9GZW5 306 aaPredicted RBP12.96□□□□□ -0.33
RAB1C-201ENST00000409159 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
RAB1C-201ENST00000409159 PICK1Q9NRD5 415 aa12.96□□□□□ -0.33
RAB1C-201ENST00000409159 SEC63Q9UGP8 760 aaKnown RBP12.96□□□□□ -0.33
RAB1C-201ENST00000409159 CFAP45Q9UL16 551 aa12.96□□□□□ -0.33
RAB1C-201ENST00000409159 WDR90Q96KV7 1748 aa12.96□□□□□ -0.34
RAB1C-201ENST00000409159 A0A1W2PRG0 241 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 ESYT2A0FGR8 921 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 C19orf81C9J6K1 198 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 CYTH3O43739 400 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 BMP3P12645 472 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 KRT85P78386 507 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 KIF23Q02241 960 aaPredicted RBP12.95□□□□□ -0.34
RAB1C-201ENST00000409159 SKOR2Q2VWA4 1001 aaPredicted RBP12.95□□□□□ -0.34
RAB1C-201ENST00000409159 FAM160B2Q86V87 743 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 CCDC82Q8N4S0 544 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 DAGLBQ8NCG7 672 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.95□□□□□ -0.34
RAB1C-201ENST00000409159 CHURC1Q8WUH1 139 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 ZNF396Q96N95 335 aaPredicted RBP12.95□□□□□ -0.34
RAB1C-201ENST00000409159 WRNIP1Q96S55 665 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 PHF20Q9BVI0 1012 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 GLT8D2Q9H1C3 349 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 BARHL2Q9NY43 387 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 PNMA2Q9UL42 364 aa12.95□□□□□ -0.34
RAB1C-201ENST00000409159 ELP1O95163 1332 aa12.94□□□□□ -0.34
RAB1C-201ENST00000409159 PNMA6FA0A0J9YX94 578 aa12.94□□□□□ -0.34
RAB1C-201ENST00000409159 FDX1P10109 184 aa12.94□□□□□ -0.34
RAB1C-201ENST00000409159 PTPRAP18433 802 aa12.94□□□□□ -0.34
RAB1C-201ENST00000409159 IREB2P48200 963 aaKnown RBP12.94□□□□□ -0.34
RAB1C-201ENST00000409159 MAP3K9P80192 1104 aa12.94□□□□□ -0.34
RAB1C-201ENST00000409159 CCDC96Q2M329 555 aa12.94□□□□□ -0.34
RAB1C-201ENST00000409159 CLEC10AQ8IUN9 316 aa12.94□□□□□ -0.34
RAB1C-201ENST00000409159 RBM46Q8TBY0 533 aaKnown RBP12.94□□□□□ -0.34
RAB1C-201ENST00000409159 SCN4AP35499 1836 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 USP17L10C9JJH3 530 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 ZBTB5O15062 677 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 WDR46O15213 610 aaKnown RBP12.93□□□□□ -0.34
RAB1C-201ENST00000409159 USP2O75604 605 aaPredicted RBP12.93□□□□□ -0.34
RAB1C-201ENST00000409159 GNA11P29992 359 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 FKBP1BP68106 108 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 SLC35G1Q2M3R5 365 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 MCTP2Q6DN12 878 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 LDHDQ86WU2 507 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 NOSTRINQ8IVI9 506 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 ADGRF4Q8IZF3 695 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 CMTR1Q8N1G2 835 aaKnown RBP12.93□□□□□ -0.34
RAB1C-201ENST00000409159 BICD2Q8TD16 824 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 ACER1Q8TDN7 264 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 C12orf42Q96LP6 360 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 JMJD4Q9H9V9 463 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 FEM1BQ9UK73 627 aa12.93□□□□□ -0.34
RAB1C-201ENST00000409159 MORC2Q9Y6X9 1032 aaPredicted RBP12.93□□□□□ -0.34
RAB1C-201ENST00000409159 SSC5DA1L4H1 1573 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 GOLGA8HP0CJ92 632 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 INPP5BP32019 993 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 KRT2P35908 639 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 TRAPPC10P48553 1259 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 STAT2P52630 851 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 GNL2Q13823 731 aaKnown RBP12.92□□□□□ -0.34
RAB1C-201ENST00000409159 SHROOM1Q2M3G4 852 aaPredicted RBP12.92□□□□□ -0.34
RAB1C-201ENST00000409159 MCTP1Q6DN14 999 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 ARMC9Q7Z3E5 817 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 DIS3L2Q8IYB7 885 aaKnown RBP12.92□□□□□ -0.34
RAB1C-201ENST00000409159 ZNF280CQ8ND82 737 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 CDCA5Q96FF9 252 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 AIFM3Q96NN9 605 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 ANP32EQ9BTT0 268 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 ZMYND12Q9H0C1 365 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 GPCPD1Q9NPB8 672 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 CSADQ9Y600 493 aa12.92□□□□□ -0.34
RAB1C-201ENST00000409159 ADM5C9JUS6 153 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 STXBP3O00186 592 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 YEATS4O95619 227 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 ECE1P42892 770 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 BACE1P56817 501 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 NLRP5P59047 1200 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 RILPL1Q5EBL4 403 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 SH3D19Q5HYK7 790 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 SYDE2Q5VT97 1194 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 MYSM1Q5VVJ2 828 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 FERMT3Q86UX7 667 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 ANKRD13AQ8IZ07 590 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 FEZ1Q99689 392 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 MAF1Q9H063 256 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 C6orf50Q9HD87 102 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 RTEL1Q9NZ71 1219 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 PCDHA4Q9UN74 947 aa12.91□□□□□ -0.34
RAB1C-201ENST00000409159 FRMPD2Q68DX3 1309 aaPredicted RBP12.9□□□□□ -0.34
RAB1C-201ENST00000409159 TMEM232C9JQI7 657 aa12.9□□□□□ -0.34
RAB1C-201ENST00000409159 PPFIA3O75145 1194 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms