RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 TPCN1Q9ULQ1 816 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 PAXBP1Q9Y5B6 917 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.25□□□□□ -1.73
RGPD4-201ENST00000408999 MYO5BQ9ULV0 1848 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 CALUO43852 315 aaPredicted RBP4.25□□□□□ -1.73
RGPD4-201ENST00000408999 PDE8BO95263 885 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 GSCP56915 257 aaPredicted RBP4.25□□□□□ -1.73
RGPD4-201ENST00000408999 FAM173BQ6P4H8 233 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 CNNM4Q6P4Q7 775 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 NBPF11Q86T75 865 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 NLRP10Q86W26 655 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 ZNF654Q8IZM8 581 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 HOOK2Q96ED9 719 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 ZSWIM6Q9HCJ5 1215 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 STAP2Q9UGK3 403 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 BCS1LQ9Y276 419 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 AXIN2Q9Y2T1 843 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 COL4A1P02462 1669 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 MAP2P11137 1827 aaKnown RBP4.25□□□□□ -1.73
RGPD4-201ENST00000408999 CEP170BQ9Y4F5 1589 aaPredicted RBP4.25□□□□□ -1.73
RGPD4-201ENST00000408999 ERVV-1B6SEH8 477 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 USP17L12C9JPN9 530 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 USP17L21D6R901 530 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 POLR2DO15514 142 aaKnown RBP4.25□□□□□ -1.73
RGPD4-201ENST00000408999 PFKFB2O60825 505 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 DDAH1O94760 285 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 EPB41P11171 864 aaKnown RBP4.25□□□□□ -1.73
RGPD4-201ENST00000408999 PTPN5P54829 565 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 PPP2R5BQ15173 497 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 ZRSR2Q15696 482 aaKnown RBP4.25□□□□□ -1.73
RGPD4-201ENST00000408999 LRRC47Q8N1G4 583 aaKnown RBP4.25□□□□□ -1.73
RGPD4-201ENST00000408999 TM6SF1Q9BZW5 370 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 GLT8D2Q9H1C3 349 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 SRP68Q9UHB9 627 aaKnown RBP4.25□□□□□ -1.73
RGPD4-201ENST00000408999 DDX41Q9UJV9 622 aaKnown RBP4.25□□□□□ -1.73
RGPD4-201ENST00000408999 STK24Q9Y6E0 443 aa4.25□□□□□ -1.73
RGPD4-201ENST00000408999 GSTTP1A0A1W2PQM5 241 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 SERPINB2P05120 415 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 ARID4AP29374 1257 aaPredicted RBP4.24□□□□□ -1.73
RGPD4-201ENST00000408999 CA8P35219 290 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 MYL5Q02045 173 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 CKAP4Q07065 602 aaKnown RBP4.24□□□□□ -1.73
RGPD4-201ENST00000408999 DPH6Q7L8W6 267 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 ZNF589Q86UQ0 364 aaPredicted RBP4.24□□□□□ -1.73
RGPD4-201ENST00000408999 ZNF274Q96GC6 653 aaPredicted RBP4.24□□□□□ -1.73
RGPD4-201ENST00000408999 BCCIPQ9P287 314 aaKnown RBP eCLIP4.24□□□□□ -1.73
RGPD4-201ENST00000408999 FRMD4BQ9Y2L6 1034 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 CRB1P82279 1406 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 ERICH4A6NGS2 130 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 H3BQF6 201 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 SEMA3EO15041 775 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 CCDC175P0C221 793 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 NLRP12P59046 1061 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 NOLC1Q14978 699 aaKnown RBP eCLIP4.24□□□□□ -1.73
RGPD4-201ENST00000408999 UBE3CQ15386 1083 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 EAPPQ56P03 285 aaPredicted RBP4.24□□□□□ -1.73
RGPD4-201ENST00000408999 ZMYM1Q5SVZ6 1142 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 SEPT12Q8IYM1 358 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 ZSWIM4Q9H7M6 989 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 OVOS2A0A0G2JMS6 1433 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 OVOS2A0A0J9YW53 1432 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 OVOS2Q6IE36 1432 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 C1orf167Q5SNV9 1468 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 GCOM1H8Y6P7 765 aaPredicted RBP4.24□□□□□ -1.73
RGPD4-201ENST00000408999 CYP27B1O15528 508 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 MYZAPP0CAP1 466 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 GJC1P36383 396 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 PNOCQ13519 176 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 UBE4AQ14139 1066 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 HLTFQ14527 1009 aaKnown RBP eCLIP4.24□□□□□ -1.73
RGPD4-201ENST00000408999 CCDC93Q567U6 631 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 SUSD4Q5VX71 490 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 CABP7Q86V35 215 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 TMEM87AQ8NBN3 555 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 SNX29Q8TEQ0 813 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 GPKOWQ92917 476 aaPredicted RBP eCLIP4.24□□□□□ -1.73
RGPD4-201ENST00000408999 NOC4LQ9BVI4 516 aaKnown RBP4.24□□□□□ -1.73
RGPD4-201ENST00000408999 IMPG2Q9BZV3 1241 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 BLZF1Q9H2G9 400 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 TAOK3Q9H2K8 898 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 TNKSO95271 1327 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 PPLO60437 1756 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 USP31Q70CQ4 1352 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 CPS1P31327 1500 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 A0A1B0GVG6 124 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 SMCO2A6NFE2 343 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 CCDC169A6NNP5 214 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 FGAP02671 866 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 GOLGA8HP0CJ92 632 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 DYNLL1P63167 89 aaKnown RBP4.24□□□□□ -1.73
RGPD4-201ENST00000408999 KRT83P78385 493 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 SCRN1Q12765 414 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 PAK1Q13153 545 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 RAPGEF1Q13905 1077 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 POSTNQ15063 836 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 HS2ST1Q7LGA3 356 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 KIAA0825Q8IV33 1275 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 NLGN1Q8N2Q7 840 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 DYDC1Q8WWB3 177 aa4.24□□□□□ -1.73
RGPD4-201ENST00000408999 TCHPQ9BT92 498 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms